Enable ruff in the pre-commit hooks (#124)

* Enable ruff in the pre-commit hooks.

* Disable the old hooks.

* Install uv in the CI.

.pre-commit-config.yaml

@@ -1,4 +1,18 @@
 repos:
+  - repo: local
+    hooks:
+    - id: ruff
+      name: ruff
+      language: system
+      entry: bash -c 'uvx ruff check'
+      pass_filenames: false
+      always_run: true
+    - id: ruff-format
+      name: ruff format
+      language: system
+      entry: bash -c 'uvx ruff format --check'
+      pass_filenames: false
+      always_run: true
     # Get rid of Jupyter Notebook output because we don't want to keep it in Git
   - repo: https://github.com/kynan/nbstripout
     rev: 0.8.1
@@ -9,14 +23,3 @@ repos:
     hooks:
       - id: check-added-large-files
         args: ["--maxkb=2048"]
-  - repo: https://github.com/astral-sh/ruff-pre-commit
-    # Ruff version.
-    rev: v0.11.7
-    hooks:
-      # Run the linter.
-      - id: ruff
-        types_or: [python, pyi] # Don't run on `jupyter` files
-        args: [--fix]
-      # Run the formatter.
-      - id: ruff-format
-        types_or: [python, pyi] # Don't run on `jupyter` files