* feat: adds format, regex_extract function and more type tests
Signed-off-by: Dennis Zhuang <killme2008@gmail.com>
* fix: forgot functions
Signed-off-by: Dennis Zhuang <killme2008@gmail.com>
* chore: forgot null type
Signed-off-by: Dennis Zhuang <killme2008@gmail.com>
* test: forgot date type
Signed-off-by: Dennis Zhuang <killme2008@gmail.com>
* feat: remove format function
Signed-off-by: Dennis Zhuang <killme2008@gmail.com>
* test: update results after upgrading datafusion
Signed-off-by: Dennis Zhuang <killme2008@gmail.com>
---------
Signed-off-by: Dennis Zhuang <killme2008@gmail.com>
* - **Refactor `RegionFilePathFactory` to `RegionFilePathProvider`:** Updated references and implementations in `access_layer.rs`, `write_cache.rs`, and related test files to use the new struct name.
- **Add `max_file_size` support in compaction:** Introduced `max_file_size` option in `PickerOutput`, `SerializedPickerOutput`, and `WriteOptions` in `compactor.rs`, `picker.rs`, `twcs.rs`, and `window.rs`.
- **Enhance Parquet writing logic:** Modified `parquet.rs` and `parquet/writer.rs` to support optional `max_file_size` and added a test case `test_write_multiple_files` to verify writing multiple files based on size constraints.
**Refactor Parquet Writer Initialization and File Handling**
- Updated `ParquetWriter` in `writer.rs` to handle `current_indexer` as an `Option`, allowing for more flexible initialization and management.
- Introduced `finish_current_file` method to encapsulate logic for completing and transitioning between SST files, improving code clarity and maintainability.
- Enhanced error handling and logging with `debug` statements for better traceability during file operations.
- **Removed Output Size Enforcement in `twcs.rs`:**
- Deleted the `enforce_max_output_size` function and related logic to simplify compaction input handling.
- **Added Max File Size Option in `parquet.rs`:**
- Introduced `max_file_size` in `WriteOptions` to control the maximum size of output files.
- **Refactored Indexer Management in `parquet/writer.rs`:**
- Changed `current_indexer` from an `Option` to a direct `Indexer` type.
- Implemented `roll_to_next_file` to handle file transitions when exceeding `max_file_size`.
- Simplified indexer initialization and management logic.
- **Refactored SST File Handling**:
- Introduced `FilePathProvider` trait and its implementations (`WriteCachePathProvider`, `RegionFilePathFactory`) to manage SST and index file paths.
- Updated `AccessLayer`, `WriteCache`, and `ParquetWriter` to use `FilePathProvider` for path management.
- Modified `SstWriteRequest` and `SstUploadRequest` to use path providers instead of direct paths.
- Files affected: `access_layer.rs`, `write_cache.rs`, `parquet.rs`, `writer.rs`.
- **Enhanced Indexer Management**:
- Replaced `IndexerBuilder` with `IndexerBuilderImpl` and made it async to support dynamic indexer creation.
- Updated `ParquetWriter` to handle multiple indexers and file IDs.
- Files affected: `index.rs`, `parquet.rs`, `writer.rs`.
- **Removed Redundant File ID Handling**:
- Removed `file_id` from `SstWriteRequest` and `CompactionOutput`.
- Updated related logic to dynamically generate file IDs where necessary.
- Files affected: `compaction.rs`, `flush.rs`, `picker.rs`, `twcs.rs`, `window.rs`.
- **Test Adjustments**:
- Updated tests to align with new path and indexer management.
- Introduced `FixedPathProvider` and `NoopIndexBuilder` for testing purposes.
- Files affected: `sst_util.rs`, `version_util.rs`, `parquet.rs`.
* chore: rebase main
* feat/multiple-compaction-output:
### Add Benchmarking and Refactor Compaction Logic
- **Benchmarking**: Added a new benchmark `run_bench` in `Cargo.toml` and implemented benchmarks in `benches/run_bench.rs` using Criterion for `find_sorted_runs` and `reduce_runs` functions.
- **Compaction Module Enhancements**:
- Made `run.rs` public and refactored the `Ranged` and `Item` traits to be public.
- Simplified the logic in `find_sorted_runs` and `reduce_runs` by removing `MergeItems` and related functions.
- Introduced `find_overlapping_items` for identifying overlapping items.
- **Code Cleanup**: Removed redundant code and tests related to `MergeItems` in `run.rs`.
* feat/multiple-compaction-output:
### Enhance Compaction Logic and Add Benchmarks
- **Compaction Logic Improvements**:
- Updated `reduce_runs` function in `src/mito2/src/compaction/run.rs` to remove the target parameter and improve the logic for selecting files to merge based on minimum penalty.
- Enhanced `find_overlapping_items` to handle unsorted inputs and improve overlap detection efficiency.
- **Benchmark Enhancements**:
- Added `bench_find_overlapping_items` in `src/mito2/benches/run_bench.rs` to benchmark the new `find_overlapping_items` function.
- Extended existing benchmarks to include larger data sizes.
- **Testing Enhancements**:
- Updated tests in `src/mito2/src/compaction/run.rs` to reflect changes in `reduce_runs` and added new tests for `find_overlapping_items`.
- **Logging and Debugging**:
- Improved logging in `src/mito2/src/compaction/twcs.rs` to provide more detailed information about compaction decisions.
* feat/multiple-compaction-output:
### Refactor and Enhance Compaction Logic
- **Refactor `find_overlapping_items` Function**: Changed the function signature to accept slices instead of mutable vectors in `run.rs`.
- **Rename and Update Struct Fields**: Renamed `penalty` to `size` in `SortedRun` struct and updated related logic in `run.rs`.
- **Enhance `reduce_runs` Function**: Improved logic to sort runs by size and limit probe runs to 100 in `run.rs`.
- **Add `merge_seq_files` Function**: Introduced a new function `merge_seq_files` in `run.rs` for merging sequential files.
- **Modify `TwcsPicker` Logic**: Updated the compaction logic to use `merge_seq_files` when only one run is found in `twcs.rs`.
- **Remove `enforce_file_num` Function**: Deleted the `enforce_file_num` function and its related test cases in `twcs.rs`.
* feat/multiple-compaction-output:
### Enhance Compaction Logic and Testing
- **Add `merge_seq_files` Functionality**: Implemented the `merge_seq_files` function in `run.rs` to optimize file merging based on scoring systems. Updated
benchmarks in `run_bench.rs` to include `bench_merge_seq_files`.
- **Improve Compaction Strategy in `twcs.rs`**: Modified the compaction logic to handle file merging more effectively, considering file size and overlap.
- **Update Tests**: Enhanced test coverage in `compaction_test.rs` and `append_mode_test.rs` to validate new compaction logic and file merging strategies.
- **Remove Unused Function**: Deleted `new_file_handles` from `test_util.rs` as it was no longer needed.
* feat/multiple-compaction-output:
### Refactor TWCS Compaction Options
- **Refactor Compaction Logic**: Simplified the TWCS compaction logic by replacing multiple parameters (`max_active_window_runs`, `max_active_window_files`, `max_inactive_window_runs`, `max_inactive_window_files`) with a single `trigger_file_num` parameter in `picker.rs`, `twcs.rs`, and `options.rs`.
- **Update Tests**: Adjusted test cases to reflect the new compaction logic in `append_mode_test.rs`, `compaction_test.rs`, `filter_deleted_test.rs`, `merge_mode_test.rs`, and various test files under `tests/cases`.
- **Modify Engine Options**: Updated engine option keys to use `trigger_file_num` in `mito_engine_options.rs` and `region_request.rs`.
- **Fuzz Testing**: Updated fuzz test generators and translators to accommodate the new compaction parameter in `alter_expr.rs` and related files.
This refactor aims to streamline the compaction configuration by reducing the number of parameters and simplifying the codebase.
* chore: add trailing space
* fix license header
* feat/revise-compaction-picker:
**Limit File Processing and Optimize Merge Logic in `run.rs`**
- Introduced a limit to process a maximum of 100 files in `merge_seq_files` to control time complexity.
- Adjusted logic to calculate `target_size` and iterate over files using the limited set of files.
- Updated scoring calculations to use the limited file set, ensuring efficient file merging.
* feat/revise-compaction-picker:
### Add Compaction Metrics and Remove Debug Logging
- **Compaction Metrics**: Introduced new histograms `COMPACTION_INPUT_BYTES` and `COMPACTION_OUTPUT_BYTES` to track compaction input and output file sizes in `metrics.rs`. Updated `compactor.rs` to observe these metrics during the compaction process.
- **Logging Cleanup**: Removed debug logging of file ranges during the merge process in `twcs.rs`.
* feat/revise-compaction-picker:
## Enhance Compaction Logic and Metrics
- **Compaction Logic Improvements**:
- Added methods `input_file_size` and `output_file_size` to `MergeOutput` in `compactor.rs` to streamline file size calculations.
- Updated `Compactor` implementation to use these methods for metrics tracking.
- Modified `Ranged` trait logic in `run.rs` to improve range comparison.
- Enhanced test cases in `run.rs` to reflect changes in compaction logic.
- **Metrics Enhancements**:
- Changed `COMPACTION_INPUT_BYTES` and `COMPACTION_OUTPUT_BYTES` from histograms to counters in `metrics.rs` for better performance tracking.
- **Debugging and Logging**:
- Added detailed logging for compaction pick results in `twcs.rs`.
- Implemented custom `Debug` trait for `FileMeta` in `file.rs` to improve debugging output.
- **Testing Enhancements**:
- Added new test `test_compaction_overlapping_files` in `compaction_test.rs` to verify compaction behavior with overlapping files.
- Updated `merge_mode_test.rs` to reflect changes in file handling during scans.
* feat/revise-compaction-picker:
### Update `FileHandle` Debug Implementation
- **Refactor Debug Output**: Simplified the `fmt::Debug` implementation for `FileHandle` in `src/mito2/src/sst/file.rs` by consolidating multiple fields into a single `meta` field using `meta_ref()`.
- **Atomic Operations**: Updated the `deleted` field to use atomic loading with `Ordering::Relaxed`.
* Trigger CI
* feat/revise-compaction-picker:
**Update compaction logic and default options**
- **`twcs.rs`**: Enhanced logging for compaction pick results by improving the formatting for better readability.
- **`options.rs`**: Modified the default `max_output_file_size` in `TwcsOptions` from 2GB to 512MB to optimize file handling and performance.
* feat/revise-compaction-picker:
Refactor `find_overlapping_items` to use an external result vector
- Updated `find_overlapping_items` in `src/mito2/src/compaction/run.rs` to accept a mutable result vector instead of returning a new vector, improving memory efficiency.
- Modified benchmarks in `src/mito2/benches/bench_compaction_picker.rs` to accommodate the new function signature.
- Adjusted tests in `src/mito2/src/compaction/run.rs` to use the updated function signature, ensuring correct functionality with the new approach.
* feat/revise-compaction-picker:
Improve file merging logic in `run.rs`
- Refactor the loop logic in `merge_seq_files` to simplify the iteration over file groups.
- Adjust the range for `end_idx` to include the endpoint, allowing for more flexible group selection.
- Remove the condition that skips groups with only one file, enabling more comprehensive processing of file sequences.
* feat/revise-compaction-picker:
Enhance `find_overlapping_items` with `SortedRun` and Update Tests
- Refactor `find_overlapping_items` in `src/mito2/src/compaction/run.rs` to utilize the `SortedRun` struct for improved efficiency and clarity.
- Introduce a `sorted` flag in `SortedRun` to optimize sorting operations.
- Update test cases in `src/mito2/benches/bench_compaction_picker.rs` to accommodate changes in `find_overlapping_items` by using `SortedRun`.
- Add `From<Vec<T>>` implementation for `SortedRun` to facilitate easy conversion from vectors.
* feat/revise-compaction-picker:
**Enhancements in `compaction/run.rs`:**
- Added `ReadableSize` import to handle size calculations.
- Modified the logic in `merge_seq_files` to clamp the calculated target size to a maximum of 2GB when `max_file_size` is not provided.
* feat/revise-compaction-picker: Add Default Max Output Size Constant for Compaction
Introduce DEFAULT_MAX_OUTPUT_SIZE constant to define the default maximum compaction output file size as 2GB. Refactor the merge_seq_files function to utilize this constant, ensuring consistent and maintainable code for handling file size limits during compaction.
* Add explain_verbose to QueryContext
* feat: fmt plan by display type
* feat: update proto to use ExplainOptions
* feat: display more info in verbose mode
* chore: fix clippy
* test: add sqlness test
* test: update sqlness result
* chore: update proto version
* chore: Simplify QueryContextBuilder::explain_options using get_or_insert_default
* feat: add predicate group
* feat: pass predicate group
* feat: memtable prune by time filters
* test: test PruneTimeIterator with time filters
* feat: push down returns exact for timestamp simple filters
---------
Co-authored-by: Ruihang Xia <waynestxia@gmail.com>
* fix: use alias expr to check commutativity
* chore: debug sort
* feat: consider alias in window sort optimizer
* test: sqlness test
* test: update sqlness result
* feat: handle filter for window sort
* test: sqlness filter test for window sort
* test: add test on tag column filter
* test: test for filter on ts
* test: update sqlness test
* fix: do not transform exprs in the limit plan
* chore: keep some logs for debug
* feat: workaround for limit in other rules
* test: add sqlness tests for offset 0
* chore: add fixme
* change dep
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* feat: adapt to arrow's interval array
* chore: fix compile errors in datatypes crate
* chore: fix api crate compiler errors
* chore: fix compiler errors in common-grpc
* chore: fix common-datasource errors
* chore: fix deprecated code in common-datasource
* fix promql and physical plan related
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* wip: upgrading network deps
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* block on updating `sqlparser`
* upgrade sqlparser
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* adapt new df's trait requirements
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* chore: fix compiler errors in mito2
* chore: fix common-function crate errors
* chore: fix catalog errors
* change import path
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* chore: fix some errors in query crate
* chore: fix some errors in query crate
* aggr expr and some other tiny fixes
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* chore: fix expr related errors in query crate
* chore: fix query serializer and admin command
* chore: fix grpc services
* feat: axum serve
* chore: fix http server
* remove handle_error handler
* refactor timeout layer
* serve axum
* chore: fix flow aggr functions
* chore: fix flow
* feat: fix errors in meta-srv
* boxed()
* use TokioIo
* feat!: Remove script crate and python feature (#5321)
* feat: exclude script crate
* chore: simplify feature
* feat: remove the script crate
* chore: remove python feature and some comments
* chore: fix warning
* chore: fix servers tests compiler errors
* feat: fix tests-integration errors
* chore: fix unused
* test: fix catalog test
* chore: fix compiler errors for crates using common-meta
testing feature is enabled when check with --workspace
* test: use display for logical plan test
* test: implement rewrite for ScanHintRule
* fix: http server build panic
* test: fix mito test
* fix: sql parser type alias error
* test: fix TestClient not listen
* test: some flow tests
* test(flow): more fix
* fix: test_otlp_logs
* test: fix promql test that using deprecated method fun()
* fix: sql type replace supports Int8 ~ Int64, UInt8 ~ UInt64
* test: fix infer schema test case
* test: fix tests related to plan display
* chore: fix last flow test
* test: fix function format related assertion
* test: use larger port range for tests
* fix: test_otlp_traces
* fix: test_otlp_metrics
* fix range query and dist plan
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* fix: flow handle distinct use deprecated field
* fix: can't pass Join plan expressions to LogicalPlan::with_new_exprs
* test: fix deserialize test
* test: reduce split key case num
* tests: lower case aggr func name
* test: fix some sqlness tests
* tests: more sqlness fix
* tests: fixed sqlness test
* commit non-bug changes
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* fix: make our udf correct
* fix: implement empty methods of ContextProvider for DfContextProviderAdapter
* test: update sqlness test result
* chore: remove unused
* fix: provide alias name for AggregateExprBuilder in range plan
* test: update range query result
* fix: implement missing ContextProvider methods for DfContextProviderAdapter
* test: update timestamps, cte result
* fix: supports empty projection in mito
* test: update comment for cte test
* fix: support projection for numbers
* test: update test cases after projection fix
* fix: fix range select first_value/last_value
* fix: handle CAST and time index conflict
* fix: handle order by correctly in range first_value/last_value
* test: update sqlness result
* test: update view test result
* test: update decimal test
wait for https://github.com/apache/datafusion/pull/14126 to fix this
* feat: remove redundant physical optimization
todo(ruihang): Check if we can remove this.
* test: update sqlness test result
* chore: range select default sort use nulls_first = false
* test: update filter push down test result
* test: comment deciaml test to avoid different panic message
* test: update some distributed test result
* test: update test for distributed count and filter push down
* test: update subqueries test
* fix: SessionState may overwrite our UDFs
* chore: fix compiler errors after merging main
* fix: fix elasticsearch and dashboard router panic
* chore: fix common-functions tests
* chore: update sqlness result
* test: fix id keyword and update sqlness result
* test: fix flow_null test
* fix: enlarge thread size in debug mode to avoid overflow
* chore: fix warnings in common-function
* chore: fix warning in flow
* chore: fix warnings in query crate
* chore: remove unused warnings
* chore: fix deprecated warnings for parquet
* chore: fix deprecated warning in servers crate
* style: fix clippy
* test: enlarge mito cache tttl test ttl time
* chore: fix typo
* style: fmt toml
* refactor: reimplement PartialOrd for RangeSelect
* chore: remove script crate files introduced by merge
* fix: return error if sql option is not kv
* chore: do not use ..default::default()
* chore: per review
* chore: update error message in BuildAdminFunctionArgsSnafu
Co-authored-by: jeremyhi <jiachun_feng@proton.me>
* refactor: typed precision
* update sqlness view case
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
* chore: flow per review
* chore: add example in comment
* chore: warn if parquet stats of timestamp is not INT64
* style: add a newline before derive to make the comment more clear
* test: update sqlness result
* fix: flow from substrait
* chore: change update_range_context log to debug level
* chore: move axum-extra axum-macros to workspace
---------
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: luofucong <luofc@foxmail.com>
Co-authored-by: discord9 <discord9@163.com>
Co-authored-by: shuiyisong <xixing.sys@gmail.com>
Co-authored-by: jeremyhi <jiachun_feng@proton.me>
* feat: assign partition ranges by rows
* feat: balance partition rows
* feat: get uppoer bound for part nums
* feat: only split in non-compaction seq scan
* fix: parallel scan on multiple sources
* fix: can split check
* feat: scanner prepare by request
* feat: remove scan_parallelism
* docs: upate docs
* chore: update comment
* style: fix clippy
* feat: skip merge and dedup if there is only one source
* chore: Revert "feat: skip merge and dedup if there is only one source"
Since memtable won't do dedup jobs
This reverts commit 2fc7a54b11.
* test: avoid compaction in sqlness window sort test
* chore: do not create semaphore if num partitions is enough
* chore: more assertions
* chore: fix typo
* fix: compaction flag not set
* chore: address review comments
* feat: use fixed error message for unknown error
* feat: return fixed message for internal error as well
* chore: include status code in error message
* test: update tests for asserts of error message
* feat: change status code of some datafusion error
* fix: make CollectRecordbatch an query error
* test: update sqlness results
* feat: only allow timestamp data type as time index
* test: update sqltest cases, todo: need some fixes
* fix: sqlness tests
* fix: forgot adding back cte test
* chore: style
