Commit Graph

34 Commits

Author SHA1 Message Date
Lei, Huang
2373d676f7 feat: add Date type and value (#189)
* wip: add Date type and value

* fix some cr comments

* impl Date values

* finish date type

* optimize Date value serialization

* add some tests

* fix some cr comments

* add some more test
2022-08-23 18:04:32 +08:00
evenyag
4a117157b9 fix: Fix replay sequence and wal dir (#196)
* fix: Fix replay include flushed data

Replay should starts from flushed_sequence + 1

* fix: Move default wal path to `/tmp/greptimedb`
2022-08-23 17:39:53 +08:00
evenyag
8ea2aa73cf refactor: Use error!(e; xxx) pattern to log error (#195)
Use `error!(e; xxx)` pattern so we could get backtrace in error log.

Also use BoxedError as error source of ExecuteQuery instead of String,
so we could carry backtrace and other info in it.
2022-08-23 17:35:24 +08:00
evenyag
9d5be75a9c refactor: Move test_util to datanode/src (#178)
This also fixes the dead code warning of `create_test_table()` as the
files under `datanode/tests` are considered as individual libs. Moves
them to src dir makes sharing codes much easier.
2022-08-17 18:36:05 +08:00
evenyag
7c779a9861 feat: Add region schema for storage engine (#171)
* refactor: Merge RowKeyMetadata into ColumnsMetadata

Now RowKeyMetadata and ColumnsMetadata are almost always being used together, no need
to separate them into two structs. Now they are combined into the single
ColumnsMetadata struct.

chore: Make some fields of metadata private

feat: Replace schema in RegionMetadata by RegionSchema

The internal schema of a region should have the knownledge about all
internal columns that are reserved and used by the storage engine, such as
sequence, value type. So we introduce the `RegionSchema`, and it would
holds a `SchemaRef` that only contains the columns that user could see.

feat: Value derives Serialize and supports converting into json value

feat: Add version to schema

The schema version has an initial value 0 and would bump each time the
schema being altered.

feat: Adds internal columns to region metadata

Introduce the concept of reserved columns and internal columns.
Reserved columns are columns that their names, ids are reserved by the storage
engine, and could not be used by the user. Reserved columns usually have
special usage. Reserved columns expect the version columns are also
called internal columns (though the version could also be thought as a
special kind of internal column), are not visible to user, such as our
internal sequence, value_type columns.

The RegionMetadataBuilder always push internal columns used by the
engine to the columns in metadata. Internal columns are all stored
behind all user columns in the columns vector.

To avoid column id collision, the id reserved for columns has the most
significant bit set to 1. And the RegionMetadataBuilder would check the
uniqueness of the column id.

chore: Rebase develop and fix compile error

feat: add internal schema to region schema

feat: Add SchemaBuilder to build Schema

feat: Store row key end in region schema metadata

Also move the arrow schema construction to region::schema mod

feat: Add SstSchema

refactor: Replace MemtableSchema by RegionSchema

Now when writing sst files, we could use the arrow schema from our sst
schema, which contains the internal columns.

feat: Use SstSchema to read parquet

Adds user_column_end to metadata. When reading parquet file,
converts the arrow schema into SstSchema, then uses the row_key_end
and user_column_end to find out row key parts, value parts and internal
columns, instead of using the timestamp index, which may yields
incorrect index if we don't put the timestamp at the end of row key.

Move conversion from Batch to arrow Chunk to SstSchema, so SST mod doesn't
need to care the order of key, value and internal columns.

test: Add test for Value to serde_json::Value

feat: Add RawRegionMetadata to persist RegionMetadata

test: Add test to RegionSchema

fix: Fix clippy

To fix clippy::enum_clike_unportable_variant lint, define the column id
offset in ReservedColumnType and compute the final column id in
ReservedColumnId's const method

refactor: Move batch/chunk conversion to SstSchema

The parquet ChunkStream now holds the SstSchema and use its method to
convert Chunk into Batch.

chore: Address CR comment

Also add a test for pushing internal column to RegionMetadataBuilder

chore: Address CR comment

chore: Use bitwise or to compute column id

* chore: Address CR comment
2022-08-17 15:28:38 +08:00
LFC
ccda17248e feat: unify servers and mysql server in datanode (#172)
* address PR comments

address PR comments

use 3306 for mysql server's default port

upgrade metric to version 0.20

move crate "servers" out of "common"

make mysql io threads count configurable in config file

add snafu backtrace for errors with source

use common-server error for mysql server

add test for grpc server

refactor testing codes

fix rustfmt check

start mysql server in datanode

move grpc server codes from datanode to common-servers

feat: unify servers

* rebase develop and resolve conflicts

* remove an unnecessary todo

Co-authored-by: luofucong <luofucong@greptime.com>
2022-08-17 14:29:12 +08:00
Lei, Huang
a1c4921933 feat: impl create table sql execution (#168)
* catalog manager allocates table id

* rebase develop

* add some tests

* add some more test

* fix some cr comments

* insert into system catalog

* use slice pattern to simplify code

* add optional dependencies

* add sql-to-request test

* successfully recover

* fix unit tests

* rebase develop

* add some tests

* fix some cr comments

* fix some cr comments

* add a lock to CatalogManager

* feat: add gmt_created and gmt_modified columns to system catalog table
2022-08-17 10:53:19 +08:00
fys
34133fae5a feat: impl select (grpc) (#138)
* SelectExpr: change to oneof expr

* Convert between Vec<u8> and SelectResult

* Chore: use encode_to_vec and decode, instead of encode_length_delimited_to_vec and decode_length_delimited

* Chore: move bitset into separate file

* Grpc select impl
2022-08-15 18:31:47 +08:00
dennis zhuang
60dc77d1d9 feat: adds datanode config file supporting, close #156 (#167)
* feat: adds datanode config file supporting, close #156

* doc: update readme

* fix: address CR problems

* fix: remove unused log
2022-08-15 16:17:56 +08:00
dennis zhuang
41ffbe82f8 feat: impl table manifest (#157)
* feat: impl TableManifest and refactor table engine, object store etc.

* feat: persist table metadata when creating it

* fix: remove unused file src/storage/src/manifest/impl.rs

* feat: impl recover table info from manifest

* test: add open table test and table manifest test

* fix: resolve CR problems

* fix: compile error and remove region id

* doc: describe parent_dir

* fix: address CR problems

* fix: typo

* Revert "fix: compile error and remove region id"

This reverts commit c14c250f8a.

* fix: compile error and generate region id by table_id and region number
2022-08-12 10:47:33 +08:00
Lei, Huang
1dd780d857 feat: implement catalog manager (#129)
Implement catalog manager that provides a vision of all existing tables while instance start. Current implementation is based on local table engine, all catalog info is stored in an system catalog table.
2022-08-11 15:43:59 +08:00
dennis zhuang
e9d6546c12 feat: impl create_table for MitoEngine, #125 (#142)
* feat: impl create_table for MitoEngine, #125

* fix: typo

* fix: address CR problems

* fix: address CR problems

* fix: address CR problems

* fix: format

* refactor: minor change
2022-08-08 15:36:00 +08:00
Ning Sun
97be052b33 feat: update tonic/prost and simplify build requirements (#130)
* feat: update tonic/prost and simplify build requirements

* doc: update readme for protoc installtion
2022-08-04 23:11:39 +08:00
Lei, Huang
7395920bc8 move catalog-related traits and struct to a catalog crate (#134) 2022-08-04 11:05:28 +08:00
Lei, Huang
96b4ed01f7 refactor: Make TableEngine object safe (#119)
* refactor: Make TableEngine object safe

* define TableEngineRef

* fix some comments

* replace table::engine::Error with table::error::Error
2022-08-01 15:37:11 +08:00
fys
3b2716ed70 feat: impl insert via grpc (#102)
* fix: build protobuf

* feat: impl grpc insert

* Add an example of grpc insert

* fix: cargo clippy

* cr
2022-07-28 10:25:22 +08:00
evenyag
bf5975ca3e feat: Prototype of the storage engine (#107)
* feat: memtable flush (#63)

* wip: memtable flush

* optimize schema conversion

* remove unnecessary import

* add parquet file verfication

* add backtrace to error

* chore: upgrade opendal to 0.9 and fixed some problems

* rename error

* fix: error description

Co-authored-by: Dennis Zhuang <killme2008@gmail.com>

* feat: region manifest service (#57)

* feat: adds Manifest API

* feat: impl region manifest service

* refactor: by CR comments

* fix: storage error mod test

* fix: tweak storage cargo

* fix: tweak storage cargo

* refactor: by CR comments

* refactor: rename current_version

* feat: add wal writer (#60)

* feat: add Wal

* upgrade engine for wal

* fix: unit test for wal

* feat: wal into region

* fix: unix test

* fix clippy

* chore: by cr

* chore: by cr

* chore: prevent test data polution

* chore: by cr

* minor fix

* chore: by cr

* feat: Implement flush (#65)

* feat: Flush framework

- feat: Add id to memtable
- refactor: Rename MemtableSet/MutableMemtables to MemtableVersion/MemtableSet
- feat: Freeze memtable
- feat: Trigger flush
- feat: Background job pool
- feat: flush job
- feat: Sst access layer
- feat: Custom Deserialize for StringBytes
- feat: Use RegionWriter to apply file metas
- feat: Apply version edit
- chore: Remove unused imports

refactor: Use ParquetWriter to replace FlushTask

refactor: FsAccessLayer takes object store as param

chore: Remove todo from doc comments

feat: Move wal to WriterContext

chore: Fix clippy

chore: Add backtrace to WriteWal error

* feat: adds manifest to region and refactor sst/manifest dir config (#72)

* feat: adds manifest to region and refactor sst/manifest dir with EngineConfig

* refactor: ensure path ends with '/' in ManifestLogStorage

* fix: style

* refactor: normalize storage directory path and minor changes by CR

* refactor: doesn't need slash any more

* feat: Implement apply_edit() and add timestamp index to schema (#73)

* feat: Implement VersionControl::apply_edit()

* feat: Add timestamp index to schema

* feat: Implement Schema::timestamp_column()

* feat: persist region metadata to manifest (#74)

* feat: persist metadata when creating region or sst files

* fix: revert FileMeta comment

* feat: resolve todo

* fix: clippy warning

* fix: revert files_to_remove type in RegionEdit

* feat: impl SizeBasedStrategy for flush (#76)

* feat: impl SizeBasedStrategy for flush

* doc: get_mutable_limitation

* fix: code style and comment

* feat: align timestamp (#75)

* feat: align timestamps in write batch

* fix cr comments

* fix timestamp overflow

* simplify overflow check

* fix cr comments

* fix clippy issues

* test: Fix region tests (comment out some unsupported tests) (#82)

* feat: flush job (#80)

* feat: flush job

* fix cr comments

* move file name instead of clone

* comment log file test (#84)

* feat: improve MemtableVersion (#78)

* feat: improve MemtableVersion

* feat: remove flushed immutable memtables and test MemtableVersion

* refactor: by CR comments

* refactor: clone kv in iterator

* fix: clippy warning

* refactor: Make BatchIterator supertrait of Iterator (#85)

* refactor: rename Version to ManifestVersion and move out manifest from ShareData (#83)

* feat: Insert multiple memtables by time range (#77)

* feat: memtable::Inserter supports insert multiple memtables by time range

* chore: Update timestamp comment

* test: Add tests for Inserter

* test: Fix region tests (comment out some unsupported tests)

* refactor: align_timestamp() use TimestampMillis::aligned_by_bucket()

* chore: rename aligned_by_bucket to align_by_bucket

* fix: Fix compile errors

* fix: sst and manifest dir (#86)

* Set RowKeyDescriptor::enable_version_column to false by default

* feat: Implement write stall (#90)

* feat: Implement write stall

* chore: Update comments

* feat: Support reading multiple memtables (#93)

* feat: Support reading multiple memtables

* test: uncomment tests rely on snapshot read

* feat: wal format (#70)

* feat: wal codec

* chore: minor fix

* chore: comment

* chore: by cr

* chore: write_batch_codec mod

* chore: by cr

* chore: upgrade proto

* chore: by cr

* fix failing test

* fix failing test

* feat: manifest to wal (#100)

* feat: write manifest to wal

* chore: sequence into wal

* chore: by cr

* chore: by cr

* refactor: create log store (#104)

Co-authored-by: dennis zhuang <killme2008@gmail.com>
Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>
Co-authored-by: fariygirl <clickmetoday@163.com>
Co-authored-by: Jiachun Feng <jiachun_feng@proton.me>
Co-authored-by: Lei, HUANG <mrsatangel@gmail.com>

* chore: Fix clippy

Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>
Co-authored-by: Dennis Zhuang <killme2008@gmail.com>
Co-authored-by: Jiachun Feng <jiachun_feng@proton.me>
Co-authored-by: fariygirl <clickmetoday@163.com>
Co-authored-by: Lei, HUANG <mrsatangel@gmail.com>
2022-07-25 15:26:00 +08:00
Jiachun Feng
6cf1da35ee feat: add grpc impl (#50)
* feat: add grpc impl

* feat: add grpc server

* some ut

* verson format: a.b

* code style

* admin request/response

* by cr

* admin api

* by cr

* chore: by cr

* chore: by cr
2022-07-06 20:56:16 +08:00
evenyag
6ec870625f refactor: Refactor usage of BoxedError (#48)
* feat: Define a general boxed error

* refactor: common_function use Error in common_query

* feat: Add tests to define_opaque_error macro

* refactor: Refactor table and table engine error

* refactor: recordbatch remove arrow dev-dependency

* refactor: datanode crate use common_error::BoxedError

* chore: Fix clippy

* feat: Returning source status code when using BoxedError

* test: Fix opaque error test

* test: Add tests for table::Error & table_engine::Error

* test: Add test for RecordBatch::new()

* test: Remove generated tests from define_opaque_error

* chore: Address cr comment
2022-06-21 15:24:45 +08:00
dennis zhuang
4071b0cff2 feat: impl scanning data from storage engine for table (#47)
* feat: impl scanning data from storage for MitoTable

* adds test mod to setup table engine test

* fix: comment error

* fix: boyan -> dennis in todo comments

* fix: remove necessary send in BatchIteratorPtr
2022-06-20 15:42:57 +08:00
dennis zhuang
e78c015fc0 TableEngine and SqlHandler impl (#45)
* Impl TableEngine, bridge to storage

* Impl sql handler to process insert sql

* fix: minor changes and typo

* test: add datanode test

* test: add table-engine test

* fix: code style

* refactor: split out insert mod from sql and minor changes by CR

* refactor: replace with_context with context
2022-06-17 11:36:49 +08:00
fengjiachun
725a261b55 feat(cmd): command refactor (#44)
* feat(cmd): command refactor
2022-06-15 20:08:00 +08:00
Lei, Huang
bd4fe1f5bc feat: RecordBatch serialization (#26) 2022-05-17 17:01:00 +08:00
dennis zhuang
93cbdbee9a feat: adds common-telemetry crate and adds logs/metrics to query engine (#25)
* feat: adds common-telemetry crate and logging mod

* refactor: common telemetry

* feat: adds metric mod and exports metrics by http

* feat: adds metrics to query engine and datanodes

* refactor: rename metrics

* refactor: rename ElapsedTimer struct and elapsed_timer macro

* refactor: log error when fail to new data node.

* fix: use backtrace crate instead of unstable feature

* feat: add must_use attr to Timer

* fix: only reserve Debug attribute for Timer
2022-05-12 17:42:48 +08:00
dennis zhuang
df1a99e27f feat: test http server api (#21)
* feat: adds http server test

* feat: limit sql output to 10 rows
2022-05-09 14:54:03 +08:00
evenyag
d5de030600 feat: Add as_any() to opaque error 2022-05-09 12:35:55 +08:00
evenyag
5f48b4996b chore: Address CR comments 2022-05-09 11:52:01 +08:00
evenyag
d2d4d88c89 test: Add MockError and add more tests for error 2022-05-07 17:29:56 +08:00
evenyag
99c7ffb456 refactor: Define error for memory catalog 2022-05-07 14:13:31 +08:00
evenyag
63d9aa1bff refactor: Refactor datanode error and impl ErrorExt for it 2022-05-07 11:34:23 +08:00
evenyag
aa1a6b2205 feat: Add common-error crate and implement opaque error type. 2022-05-06 20:04:14 +08:00
dennis zhuang
f0db878bf5 feat: http server and cmd crate etc. (#15)
* feat: adds cmd crate and http server

* feat: impl sql http handler

* feat: convert all arrow array types

* feat: adds query test

* feat: adds test for datanode

* fix: format

* feat: refactor state.rs

* feat: adds collect test

* fix: by code review

* fix: style
2022-05-06 17:34:29 +08:00
evenyag
1fa0b4e3f9 chore: Setup code skeleton of datanode 2022-04-21 11:40:46 +08:00
evenyag
ced9a7c97f chore: Create datanode, datatypes, log-store, object-store, query, table crates 2022-04-20 16:34:22 +08:00