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1022 Commits

Author SHA1 Message Date
Ruihang Xia
b5e5f8e555 chore(deps): bump arrow and parquet to 36.0.0, and datafusion to the latest (#1282) 
* chore: update arrow, parquet to 36.0 and datafusion

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update deps

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* Apply suggestions from code review

Co-authored-by: LFC <bayinamine@gmail.com>

* update sqlness result

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: LFC <bayinamine@gmail.com>
 2023-03-30 16:24:10 +08:00
shuiyisong
995a28a27d feat: impl BatchDelete (#1253) 
* chore: impl `BatchDelete`

* chore: add `batch_delete` to meta-client

* fix: auth param length check

* fix: auth param length check

* chore: rebase develop

* chore: use `filter_map`

Co-authored-by: LFC <bayinamine@gmail.com>

* chore: update error msg

Co-authored-by: LFC <bayinamine@gmail.com>

* fix: pre-allocate vec length

---------

Co-authored-by: LFC <bayinamine@gmail.com>
 2023-03-28 14:06:13 +08:00
Lei, HUANG
5edd2a3dbe feat: upgrade opendal (#1245) 
* chore: upgrade opendal

* chore: finish upgrading opendal

* fix: clippy complaints

* fix some tests

* fix: all unit tests

* chore: rebase develop

* fix: sqlness tests

* optimize imports

* chore: rebase develop

* doc: add todo
 2023-03-28 09:47:33 +08:00
Ning Sun
e63b28bff1 feat: add dbname and health check for grpc api (#1220) 
* feat: add dbname and health check for grpc api

* refactor: move health check to dedicated service

* chore: switch to merged proto rev

* feat: implement healthcheck on server-side
 2023-03-28 09:46:30 +08:00
Ning Sun
7eb4d81929 feat: adopt pgwire 0.12 and simplify encoding apis (#1250) 
* feat: adopt pgwire 0.12 and simplify encoding apis

* refactor: remove duplicated format match clause
 2023-03-27 18:16:43 +08:00
LFC
65ea6fd85f feat: embed dashboard into GreptimeDB binary (#1239) 
* feat: embed dashboard into GreptimeDB binary

* fix: resolve PR comments
 2023-03-27 15:08:44 +08:00
dennis zhuang
4f15b26b28 feat: region manifest checkpoint (#1202) 
* chore: adds log when manifest protocol is changed

* chore: refactor region manifest

* temp commit

* feat: impl region manifest checkpoint

* feat: recover region version from manifest snapshot

* test: adds region snapshot test

* test: region manifest checkpoint

* test: alter region with manifest checkpoint

* fix: revert storage api

* feat: delete old snapshot

* refactor: manifest log storage

* Update src/storage/src/version.rs

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

* Update src/storage/src/manifest/checkpoint.rs

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

* Update src/storage/src/manifest/region.rs

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

* Update src/storage/src/manifest/region.rs

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

* chore: by CR comments

* refactor: by CR comments

* fix: typo

* chore: tweak start_version

---------

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>
 2023-03-27 11:15:52 +08:00
LFC
b77b561bc8 refactor: execute insert with select in query engine (#1181) 
* refactor: execute insert with select in query engine

* fix: resolve PR comments
 2023-03-23 10:38:26 +08:00
LFC
b2a09c888a feat: phi accrual failure detector (#1200) 2023-03-21 11:47:47 +08:00
LFC
af101480b3 feat: add gRPC reflection service (#1208) 
* feat: add gRPC reflection service

* feat: add gRPC reflection service
 2023-03-21 11:23:29 +08:00
Weny Xu
e19c8fa2b6 refactor: combine Copy To and Copy From (#1197) 
* refactor: combine Copy To and Copy From

* Apply suggestions from code review

Co-authored-by: LFC <bayinamine@gmail.com>

* Apply suggestions from code review

Co-authored-by: Lei, HUANG <6406592+v0y4g3r@users.noreply.github.com>

---------

Co-authored-by: LFC <bayinamine@gmail.com>
Co-authored-by: Lei, HUANG <6406592+v0y4g3r@users.noreply.github.com>
 2023-03-20 19:23:25 +08:00
LFC
ad886f5b3e feat: GRPC client stream interface for insertion (#1206) 
* feat: GRPC client stream interface for insertion

* feat: GRPC client stream interface for insertion
 2023-03-20 18:45:37 +08:00
LFC
f6669a8201 feat: add GRPC unary call service to our GreptimeDB (#1196) 
* feat: add GRPC unary call service to our GreptimeDB
 2023-03-20 14:27:32 +08:00
Weny Xu
facdda4d9f feat: implement CONNECTION clause of Copy To (#1163) 
* feat: implement CONNECTION clause of Copy To

* test: add tests for s3 backend

* Apply suggestions from code review

Co-authored-by: Yingwen <realevenyag@gmail.com>

---------

Co-authored-by: Yingwen <realevenyag@gmail.com>
 2023-03-16 11:36:38 +08:00
Xieqijun
cd8be77968 feat(procedure): Max retry time (#1095) 
* feat: procedure config

* fix: modify config

* feat: add retry logic

* feat: add error

* feat: add it

* feat: add it

* feat: add it

* feat: rm retry from runner

* feat: use backon

* feat: add retry_interval

* feat: add retry_interval

* fix: conflict

* fix: cr

* feat: add retry error and id

* feat: rename

* refactor: execute

* feat: use config dir

* fix: cr

* fix: cr

* fix: fmt

* fix: fmt

* fix: pr

* fix: it

* fix: rm unless cmd params

* feat: add toml

* fix: ut

* feat: add rolling back

* fix: cr

* fix: cr

* fix: cr

* fix: ci

* fix: ci

* fix: ci

* chore: Apply suggestions from code review

---------

Co-authored-by: Yingwen <realevenyag@gmail.com>
 2023-03-15 08:28:08 +00:00
Ruihang Xia
e8d2e82335 fix: ambiguous column reference (#1177) 
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2023-03-14 13:18:43 +00:00
LFC
8d3999df5f fix: failed to run subquery wrapped in two parentheses (#1157) 2023-03-14 10:59:43 +08:00
LFC
604c20a83d refactor: remove the SQL execution interfaces in Datanode (#1135) 
* refactor: remove the SQL execution interfaces in Datanode
 2023-03-13 18:45:30 +08:00
Ning Sun
85dd7e4f24 feat: implement promql query on grpc (#1134) 
* feat: implement promql query on grpc

* test: resolve test errors

* test: add tests for promql grpc api

* refactor: align prom object name with proto

* chore: switch proto revision to main
 2023-03-13 15:24:34 +08:00
Yingwen
dfd91a1bf8 chore: Bump version to 0.1.1 (#1155) 2023-03-11 01:11:23 +08:00
localhost
ded31fb069 chore: remove addr from datanode error message (#1152) 
* chore: remove addr from datanode error message

* chore: add log for flight get error
 2023-03-10 14:13:01 +08:00
Ning Sun
58bdf27068 fix: make pyo3 optional again (#1153) 
* fix: make pyo3 optional again

* Update src/script/Cargo.toml

Co-authored-by: dennis zhuang <killme2008@gmail.com>

---------

Co-authored-by: dennis zhuang <killme2008@gmail.com>
 2023-03-09 14:16:48 +00:00
Ruihang Xia
38fe1a2f01 chore: update dependencies (#1148) 
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2023-03-09 14:24:29 +08:00
Yingwen
9619940569 ci: Allow error when building release for non-x86 platform (#1140) 2023-03-08 18:12:06 +08:00
Weny Xu
ed8252157a chore: code styling (#1137) 
Co-authored-by: Ruihang Xia <waynestxia@gmail.com>
 2023-03-08 08:10:12 +00:00
SSebo
95090592f0 feat: mysql prepare replacing sql placeholder to param (#1086) 
* feat: mysql prepare by replace ? in sql to param

* chore: mysql prepare statment support time param

* chore: prepare test more types

* chore: add TODO
 2023-03-08 11:02:29 +08:00
Ruihang Xia
3a527c0fd5 feat: impl proc macro range_fn and some aggr_over_time functions (#1072) 
* impl range_fn proc macro

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* impl some aggr_over_time fn

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* impl present_over_time and absent_over_time

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* accomplish planner, and correct type cast

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* clean up

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* document the macro

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix styles

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update irate/idelta test

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* add test cases

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix clippy

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2023-03-07 23:39:45 +08:00
Weny Xu
7169fe2989 feat: implement Copy From (#1064) 2023-03-07 17:54:11 +08:00
Lei, HUANG
a4c01f4a3a feat: memory profiling (#1124) 
* feat: use jemalloc as default allocator

* feat: add feature for mem-prof

* feat: add errors

* make common-mem-prof optional dep

* fix: toml format

* doc: add profile doc

* fix: typo
 2023-03-07 17:12:51 +08:00
Weny Xu
bd98a26cca chore: bump greptime-proto to latest(ad01872) (#1102) 2023-03-07 10:52:42 +08:00
shuiyisong
1b4236d698 refactor: use split instead of serde_urlencoded in http auth (#1110) 
* refactor: change from urlencoded to regex

* refactor: change from urlencoded to regex

* chore: add unit test

* chore: update comment

* chore: remove local benchmark test

* chore: minor fix

* chore: remove unused dep
 2023-03-07 10:51:47 +08:00
discord9
379f581780 test: add Integrated Test for Coprocessor& fix minor bugs (#1122) 
* feat: cache `Runtime`

* fix: coprstream schema not set

* test: integrated tests for Coprocessor

* fix: UDF fixed

* style: remove unused import

* chore: remove more unused import

* feat: `filter`, (r)floordiv for Vector

* chore: CR advices

* feat: auto convert to `lit`

* chore: fix typo

* feat: from&to `pyarrow.array`

* feat: allow `pyarrow.array` as args to builtins

* chore: cargo fmt

* test: CI add `pyarrow`

* test: install Python&PyArrow in CI

* test: not cache depend for now

* chore: CR advices

* test: fix name

* style: rename
 2023-03-06 19:20:59 +08:00
fys
559880cb84 fix: can not find catalog when create table (#1118) 
* fix: get catalog by name in RemoteCatalogManager

* cr

* cr

* cr

* fix: ut failed
 2023-03-06 14:44:40 +08:00
Yingwen
f1b65d9b77 test: fix datanode::test_read_from_config_file (#1106) 
* test: Fix datanode::test_read_from_config_file

* test: frontend and metasrv don't read example toml file
 2023-03-01 18:31:40 +08:00
Ruihang Xia
d5a2a26916 chore(deps): bump sqlness to v0.4 (#1101) 
deps: bump sqlness to v0.4

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2023-03-01 17:27:16 +08:00
discord9
c5c6494e0b feat: add PyO3(Hence CPython as a Optional Backend (#976) 
* refactor: ffi_types

* style: fmt

* refactor: use `String` for return when possible

* todo: vector_impl

* feat: pyobj_try_typed_val

* refactor: more backend indep function

* feat: +-*/ magic methods

* refactor: copr

* style: fmt

* feat: add paired tests

* refactor: more

* refactor: move inside `python` folder

* refactor: all but test code

* feat: builtins for PyO3

* chore: add licenses

* chore: remove unused&add todos

* refactor: remove old files

* chore: mark unused

* chore: fmt

* chore: license

* feat: query in PyO3

* test: paired testcases for rspy&pyo3

* feat: PyDataFrame(Untested)

* feat: some allow_threads

* style: fmt

* style: add license

* feat: rebase manually of #962

* feat: more `allow_threads`

* chore: typo

* chore: remove some `TODO`

* test: allow margin of epsilon

* chore: code review advices

* chore: more CR adjust

* chore: more adjust

* feat: kwargs&its test

* chore: remove some `dbg!`

* chore: allow params

* fix: put `dataframe` into scope

* chore: newline

* fix: adjust after rebase

* fix: test serde skip attr

* style: taplo

* feat: add `pyo3_backend` feature

* doc: update CI&readme
 2023-03-01 10:45:55 +08:00
LFC
8cd69f441e feat: REPL issues logical plan to DB (#1097) 2023-02-28 16:59:48 +08:00
LFC
11d45e2918 refactor: upgrade DataFusion, Arrow and Sqlparser (#1074) 
* refactor: upgrade DataFusion, Arrow and Sqlparser

* fix: resolve PR comments
 2023-02-27 22:20:08 +08:00
Ning Sun
4b58a8a18d feat: update substrait and prost version (#1080) 2023-02-27 15:18:12 +08:00
Yingwen
bd377ef329 feat: Procedure to create table and register table to catalog (#1040) 
* feat: Add table-procedures crate

* feat: Implement procedure to create table

* feat: Integrate procedure manager to datanode

* test: Test CreateTableProcedure

* refactor: Rename table-procedures to table-procedure

* feat: Implement create_table_by_procedure

* chore: Remove comment

* chore: Add todo

* feat: Add procedure config to standalone mode

* feat: Register table-procedure loaders

* feat: Address review comments

CreateTableProcedure just return error if the subprocedure is failed

* chore: Address CR comments
 2023-02-27 11:49:23 +08:00
LFC
df751c38b4 feat: a simple REPL for debugging purpose (#1048) 
* feat: a simple REPL for debugging purpose

* fix: rebase develop
 2023-02-27 11:00:15 +08:00
Yingwen
f6e871708a chore: Rename MetaClientOpts to MetaClientOptions (#1075) 
* fix: Serialize FrontendOptions to toml

* fix: Serialize DatanodeOptions to toml

* fix: Serialize StandaloneOptions to toml

See https://users.rust-lang.org/t/why-toml-to-string-get-error-valueaftertable/85903/2

* chore!: Rename MetaClientOpts to MetaClientOptions

BREAKING CHANGE: Change the meta_client_opts in the config file to
meta_client_options
 2023-02-24 16:28:38 +08:00
Ning Sun
8f67d8ca93 fix: update mysql server library to fix tls corrupt messsage issue (#1065) 2023-02-24 10:20:44 +08:00
Xuanwo
98ef74bff4 chore: Bump OpenDAL to v0.27 (#1057) 
* Bump OpenDAL to v0.27

Signed-off-by: Xuanwo <github@xuanwo.io>

* Make cargo check happy

Signed-off-by: Xuanwo <github@xuanwo.io>

* Address comments

Signed-off-by: Xuanwo <github@xuanwo.io>

* Address comments

Signed-off-by: Xuanwo <github@xuanwo.io>

* Format toml

Signed-off-by: Xuanwo <github@xuanwo.io>

* Make taplo happy

Signed-off-by: Xuanwo <github@xuanwo.io>

---------

Signed-off-by: Xuanwo <github@xuanwo.io>
 2023-02-23 11:20:45 +08:00
shuiyisong
fb2e0c7cf3 feat: add auth to grpc handler (#1051) 
* chore: get header in grpc & temp save

* chore: change authscheme to include data str

* chore: add auth to grpc flight handler

* chore: add unit test & hold for now since grpc api doesnt accept req input

* chore: minor change

* chore: minor change

* chore: add flight context to database interface

* chore: add test

* chore: update proto version & fix cr issue

* chore: add test

* chore: minor update
 2023-02-22 15:20:10 +08:00
Lei, HUANG
e17d5a1c41 feat: support table options (#1044) 
* feat: change table options from string map to a struct, add ttl and write_buffer_size

* fix: also pass table options to table meta

* feat: pass table options when opening/creating regions

* fix: CR comments
 2023-02-21 08:10:23 +00:00
Yingwen
aaaf24143d feat: Procedure to create a mito engine (#1035) 
* feat: wip

* feat: Implement procedure to create mito table

* feat: Add create_table_procedure to TableEngine

* feat: Impl dump and lock for CreateMitoTable

* feat: Impl CreateMitoTable::execute and register it to manager

* feat(common-procedure): pub local mod

* feat: Add simple test for MitoCreateTable

* style: Fix clippy

* refactor: Move create_table_procedure to a new trait TableEngineProcedure
 2023-02-21 09:40:56 +08:00
Ruihang Xia
68b231987c feat: improve Prometheus compliance (#1022) 
* initial impl

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* minor (useless) refactor

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* retrieve metric name

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* add time index column to group by columns
filter out NaN in normalize
remove NULL in instant manipulator
accept form data as HTTP params
correct API URL
accept second literal as step param

* happy clippy

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update test result

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2023-02-20 07:29:43 +00:00
dennis zhuang
a9c8584c98 feat: impl insert data from query (#1025) 
* feat: refactor insertion in datanode

* feat: supports inserting data by select query

* feat: impl cast operation for vector

* feat: streaming insert from select query results

* chore: minor changes

* fix: remove unwrap

* test: insert_to_requsts

* test: test_execute_insert_by_select

* fix: cast operation for vectors

* fix: test

* fix: typo

* chore: by CR comments

* fix: test_statement_to_request
 2023-02-17 17:56:12 +08:00
Ruihang Xia
a8c2b35ec6 chore: bump rust to nightly-2023-02-14 (#1019) 
* chore: bump rust to nightly-2023-02-14

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix clippy

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* bump statrs to 0.16

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2023-02-16 13:17:57 +08:00