Commit Graph

29 Commits

Author SHA1 Message Date
Eugene Tolbakov
b31a6cb506 refactor: replace tempdir with tempfile (#1123)
* refactor: replace tempdir with tempfile

* refactor(query): move tempfile dependency under the workspace's Cargo.toml

* refactor(tempfile): create common-test-util

* refactor(tempfile): fix toml format

* refactor(tempfile): remove tempfile out of dependencies

* refactor(tempfile): fix incorrect toml
2023-03-08 11:15:56 +08:00
Xuanwo
fdd17c6eeb refactor: Clean up re-export of opendal services (#1067)
Signed-off-by: Xuanwo <github@xuanwo.io>
2023-02-23 14:12:34 +08:00
Xuanwo
98ef74bff4 chore: Bump OpenDAL to v0.27 (#1057)
* Bump OpenDAL to v0.27

Signed-off-by: Xuanwo <github@xuanwo.io>

* Make cargo check happy

Signed-off-by: Xuanwo <github@xuanwo.io>

* Address comments

Signed-off-by: Xuanwo <github@xuanwo.io>

* Address comments

Signed-off-by: Xuanwo <github@xuanwo.io>

* Format toml

Signed-off-by: Xuanwo <github@xuanwo.io>

* Make taplo happy

Signed-off-by: Xuanwo <github@xuanwo.io>

---------

Signed-off-by: Xuanwo <github@xuanwo.io>
2023-02-23 11:20:45 +08:00
Ruihang Xia
a8c2b35ec6 chore: bump rust to nightly-2023-02-14 (#1019)
* chore: bump rust to nightly-2023-02-14

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix clippy

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* bump statrs to 0.16

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
2023-02-16 13:17:57 +08:00
elijah
926022e14c feat: enable caching when using object store (#928)
* feat: enable caching when using object store

* feat: support file cache for object store

* feat: maintaining the cached files with lru

* fix: improve the code

* empty commit

* improve the code
2023-02-07 15:46:37 +08:00
Yingwen
b2ad0e972b feat: Define procedure related traits (#904)
* chore: Move uuid to workspace.dependencies

* feat: Define procedure related traits

* test: Add tests

* chore: Update imports

* feat: Submit ProcedureWithId to manager

* chore: pub ProcedureId::parse_str

* refactor: ProcedureId::parse_str returns Result

* chore: Address CR comments

Also implements FromStr for ProcedureId
2023-01-31 14:17:28 +08:00
Yun Chen
a7dc86ffe5 feat: oss storage support (#911)
* feat: add oss storage support

* fix: ci build format check

* fix: align OSS to Oss

* fix: cr comments

* fix: rename OSS to Oss in integration tests

* fix: clippy fix
2023-01-29 20:09:38 +08:00
Xuanwo
777a3182c5 feat: Bump OpenDAL to 0.24 for better seekable support (#847)
* deps: Bump OpenDAL to 0.24 for better seekable support

Signed-off-by: Xuanwo <github@xuanwo.io>

* fix: test

Signed-off-by: Xuanwo <github@xuanwo.io>
Co-authored-by: Lei, HUANG <mrsatangel@gmail.com>
2023-01-09 11:37:43 +08:00
Lei, HUANG
8ffc078f88 fix: license header (#815) 2023-01-03 15:09:49 +08:00
Ruihang Xia
26a3e93ca7 chore: util workspace deps in more places (#792)
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
2022-12-27 16:26:59 +08:00
LFC
dc52a51576 chore: upgrade to Arrow 29.0 and use workspace package and dependencies (#782)
* chore: upgrade to Arrow 29.0 and use workspace package and dependencies

* fix: resolve PR comments

Co-authored-by: luofucong <luofucong@greptime.com>
2022-12-23 14:28:37 +08:00
dennis zhuang
7f59758e69 feat: bump opendal version to 0.22 (#721)
* feat: bump opendal version to 0.22

* fix: LoggingLayer
2022-12-08 11:19:21 +08:00
shuiyisong
8232015998 fix: cargo sort in pre-commit (#689) 2022-12-02 16:19:31 +08:00
dennis zhuang
2e17e9c4b5 feat: supports s3 storage (#656)
* feat: adds s3 object storage configuration

* feat: adds s3 integration test

* chore: use map

* fix: forgot license header

* fix: checking if bucket is empty in test_on

* chore: address CR issues

* refactor: run s3 test with dotenv

* chore: randomize grpc port for test

* fix: README in tests-integration

* chore: remove redundant comments
2022-12-01 10:59:14 +08:00
dennis zhuang
5fddb799f7 feat: enable atomic write for file object storage (#643)
* fix: remove opendal from catalog dependencies

* feat: enable atomic writing for fs service
2022-11-28 16:01:32 +08:00
Xuanwo
4085fc7899 chore: Bump OpenDAL to v0.21.1 (#639)
* deps: Bump OpenDAL to v0.21.1

Signed-off-by: Xuanwo <github@xuanwo.io>

* Avoid using raw types when not needed

Signed-off-by: Xuanwo <github@xuanwo.io>

Signed-off-by: Xuanwo <github@xuanwo.io>
2022-11-27 10:18:39 +08:00
dennis zhuang
c09775d17f feat: adds metrics, tracing and retry layer to object-store (#621) 2022-11-23 11:40:03 +08:00
Xuanwo
1f0b39cc8d chore: Bump OpenDAL to v0.20 (#569)
Signed-off-by: Xuanwo <github@xuanwo.io>
2022-11-18 14:17:38 +08:00
Ning Sun
173a8f67a1 test: ignore empty s3 bucket (#529) 2022-11-16 11:35:12 +08:00
Ruihang Xia
7ba512980a chore: add APACHE-2.0 license header (#518)
* feat: add license checker workflow

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix existing header

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* specify license for internal sub-crate

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix rustfmt

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
2022-11-15 18:05:46 +08:00
Ruihang Xia
1565c8d236 chore: specify import style in rustfmt (#460)
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
2022-11-15 15:58:54 +08:00
dennis zhuang
448e8f139e fix: table and database conflicts (#491)
* fix: table conflicts in different database, #483

* feat: support db query param in prometheus remoting read/write

* feat: support db query param in influxdb line protocol

* fix: make schema_name work in gRPC

* fix: table data path

* fix: table manifest dir

* feat: adds opendal logging layer to object store

* Update src/frontend/src/instance.rs

Co-authored-by: LFC <bayinamine@gmail.com>

* Update src/frontend/src/instance.rs

Co-authored-by: LFC <bayinamine@gmail.com>

* Update src/servers/src/line_writer.rs

Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>

* Update src/servers/src/line_writer.rs

Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>

* fix: compile error

* ci: use larger runner for running coverage

* fix: address already in use in test

Co-authored-by: LFC <bayinamine@gmail.com>
Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>
2022-11-14 23:16:52 +08:00
Ning Sun
f243649971 refactor: Removed openssl from build requirement (#308)
* refactor:replace another axum-test-helper branch

* refactor: upgrade opendal  version

* refactor: use cursor for file buffer

* refactor:remove native-tls in mysql_async

* refactor: use async block and pipeline for newer opendal api

* chore: update Cargo.lock

* chore: update dependencies

* docs: removed openssl from build requirement

* fix: call close on pipe writer to flush reader for parquet streamer

* refactor: remove redundant return

* chore: use pinned revision for our forked mysql_async

* style: avoid wild-card import in test code

* Apply suggestions from code review

Co-authored-by: Yingwen <realevenyag@gmail.com>

* style: use chained call for builder

Co-authored-by: liangxingjian <965662709@qq.com>
Co-authored-by: Yingwen <realevenyag@gmail.com>
2022-10-17 19:29:17 +08:00
dennis zhuang
c8cb705d9e ci: pre-commit configuration and hooks (#261)
* feat: adds pre-commit config and hooks

* refactor: sort all Cargo.toml by cargo-sort

* ci: adds conventional-pre-commit hook to pre-commit

* fix: remove .pre-commit-hooks.yaml

* fix: readme

* Update .pre-commit-config.yaml

Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>

* ci: move clippy hook to push stage

* docs: install pre-push github hook

Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>
2022-09-15 11:30:08 +08:00
evenyag
03e965954a feat: implement read framework (#108)
* feat: implement read framework

feat: chunk reader builder

refactor: rename BatchIteratorPtr to BoxedBatchIterator

feat: BatchReader to read batch from ssts

feat: Add a ConcatReader to concat sst readers

test: Add tests for concat reader

chore: Fix clippy

* feat: implement SST parquet reader (#109)

* feat: implement parquet sst reader

* chores: fix some CR comments

* gst

* fix sst writer flush issue

* feat: Implement FsAccessLayer::read_sst

* fix: remove lifetime from ChunkStream

* refactor: Store file name in FileMeta

- Store file name instead of path (`region-name/file-name`) in FileMeta.
- `AccessLayer::read()` takes file name instead of path, so the read/write api are consistent

Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>
Co-authored-by: Lei, HUANG <mrsatangel@gmail.com>
2022-07-28 11:46:51 +08:00
evenyag
bf5975ca3e feat: Prototype of the storage engine (#107)
* feat: memtable flush (#63)

* wip: memtable flush

* optimize schema conversion

* remove unnecessary import

* add parquet file verfication

* add backtrace to error

* chore: upgrade opendal to 0.9 and fixed some problems

* rename error

* fix: error description

Co-authored-by: Dennis Zhuang <killme2008@gmail.com>

* feat: region manifest service (#57)

* feat: adds Manifest API

* feat: impl region manifest service

* refactor: by CR comments

* fix: storage error mod test

* fix: tweak storage cargo

* fix: tweak storage cargo

* refactor: by CR comments

* refactor: rename current_version

* feat: add wal writer (#60)

* feat: add Wal

* upgrade engine for wal

* fix: unit test for wal

* feat: wal into region

* fix: unix test

* fix clippy

* chore: by cr

* chore: by cr

* chore: prevent test data polution

* chore: by cr

* minor fix

* chore: by cr

* feat: Implement flush (#65)

* feat: Flush framework

- feat: Add id to memtable
- refactor: Rename MemtableSet/MutableMemtables to MemtableVersion/MemtableSet
- feat: Freeze memtable
- feat: Trigger flush
- feat: Background job pool
- feat: flush job
- feat: Sst access layer
- feat: Custom Deserialize for StringBytes
- feat: Use RegionWriter to apply file metas
- feat: Apply version edit
- chore: Remove unused imports

refactor: Use ParquetWriter to replace FlushTask

refactor: FsAccessLayer takes object store as param

chore: Remove todo from doc comments

feat: Move wal to WriterContext

chore: Fix clippy

chore: Add backtrace to WriteWal error

* feat: adds manifest to region and refactor sst/manifest dir config (#72)

* feat: adds manifest to region and refactor sst/manifest dir with EngineConfig

* refactor: ensure path ends with '/' in ManifestLogStorage

* fix: style

* refactor: normalize storage directory path and minor changes by CR

* refactor: doesn't need slash any more

* feat: Implement apply_edit() and add timestamp index to schema (#73)

* feat: Implement VersionControl::apply_edit()

* feat: Add timestamp index to schema

* feat: Implement Schema::timestamp_column()

* feat: persist region metadata to manifest (#74)

* feat: persist metadata when creating region or sst files

* fix: revert FileMeta comment

* feat: resolve todo

* fix: clippy warning

* fix: revert files_to_remove type in RegionEdit

* feat: impl SizeBasedStrategy for flush (#76)

* feat: impl SizeBasedStrategy for flush

* doc: get_mutable_limitation

* fix: code style and comment

* feat: align timestamp (#75)

* feat: align timestamps in write batch

* fix cr comments

* fix timestamp overflow

* simplify overflow check

* fix cr comments

* fix clippy issues

* test: Fix region tests (comment out some unsupported tests) (#82)

* feat: flush job (#80)

* feat: flush job

* fix cr comments

* move file name instead of clone

* comment log file test (#84)

* feat: improve MemtableVersion (#78)

* feat: improve MemtableVersion

* feat: remove flushed immutable memtables and test MemtableVersion

* refactor: by CR comments

* refactor: clone kv in iterator

* fix: clippy warning

* refactor: Make BatchIterator supertrait of Iterator (#85)

* refactor: rename Version to ManifestVersion and move out manifest from ShareData (#83)

* feat: Insert multiple memtables by time range (#77)

* feat: memtable::Inserter supports insert multiple memtables by time range

* chore: Update timestamp comment

* test: Add tests for Inserter

* test: Fix region tests (comment out some unsupported tests)

* refactor: align_timestamp() use TimestampMillis::aligned_by_bucket()

* chore: rename aligned_by_bucket to align_by_bucket

* fix: Fix compile errors

* fix: sst and manifest dir (#86)

* Set RowKeyDescriptor::enable_version_column to false by default

* feat: Implement write stall (#90)

* feat: Implement write stall

* chore: Update comments

* feat: Support reading multiple memtables (#93)

* feat: Support reading multiple memtables

* test: uncomment tests rely on snapshot read

* feat: wal format (#70)

* feat: wal codec

* chore: minor fix

* chore: comment

* chore: by cr

* chore: write_batch_codec mod

* chore: by cr

* chore: upgrade proto

* chore: by cr

* fix failing test

* fix failing test

* feat: manifest to wal (#100)

* feat: write manifest to wal

* chore: sequence into wal

* chore: by cr

* chore: by cr

* refactor: create log store (#104)

Co-authored-by: dennis zhuang <killme2008@gmail.com>
Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>
Co-authored-by: fariygirl <clickmetoday@163.com>
Co-authored-by: Jiachun Feng <jiachun_feng@proton.me>
Co-authored-by: Lei, HUANG <mrsatangel@gmail.com>

* chore: Fix clippy

Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>
Co-authored-by: Dennis Zhuang <killme2008@gmail.com>
Co-authored-by: Jiachun Feng <jiachun_feng@proton.me>
Co-authored-by: fariygirl <clickmetoday@163.com>
Co-authored-by: Lei, HUANG <mrsatangel@gmail.com>
2022-07-25 15:26:00 +08:00
evenyag
4171173b76 feat: Support creating in memory region and writing to memtable (#40)
* chore(store-api): Fix typo in region comments

* feat(storage): Init storage crate

* feat(store-api): Make some method async

* feat(storage): Blank StorageEngine implementation

* feat(storage): StorageEngine returns owned SchemaRef

* feat: pub use arrow in datatypes

* feat(store-api): Implement RegionMetadata

* feat(storage): Impl create region in memory.

* chore(object-store): Format cargo toml

* chore(storage): Log on region created

* feat: Impl CowCell

* feat: Store id to cf meta mapping

* refactor: Refactor version and rename it to VersionControl

* feat: Impl write batch for put, refactor column family

* feat(storage): Skeleton of writing to memtable

* refactor(storage): MemTable returns MemTableSchema

* feat: Add ColumnSchema and conversion between schema and arrow's schema

* feat: Validate put data

* feat: Valid schema of write batch

* feat: insert memtable WIP

* feat: Impl Inserter for memtable

* feat(datatypes): Implement Eq/Ord for Value

feat: Implement Ord/Eq for Bytes/StringBytes and Deref for Bytes

test: Test Value::from()

* feat: Define BTreeMemTable

* Fix: Rename get/get_unchecked to try_get/get and fix get not consider null.

* feat: Impl BTreeMemTable::write()

* refactor: Remove useless ColumnFamilyHandle now

* chore: Clean comment

* feat(common): Add from `String/&str/Vec<u8>/&[u8]` for Value

* test(storage): Add tests for WriteBatch

* chore: Fix clippy

* feat: Add builder for RowKey/ColumnFamilyDescriptor

* test: Add test for metadata

* chore: Fix clippy

* test: Add test for region and engine

* chore: Fix clippy

* chore: Address CR comment
2022-06-09 16:50:02 +08:00
dennis zhuang
a819b6bce5 feat: impl object-store based on opendal (#27)
* feat: impl object-store based on opendal

* feat: adds s3 test

* feat: export Layer

* feat: pass s3 access key/secret by env vars

* fix: logging when s3 test is running
2022-05-17 15:58:27 +08:00
evenyag
ced9a7c97f chore: Create datanode, datatypes, log-store, object-store, query, table crates 2022-04-20 16:34:22 +08:00