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f9db5ff0d6d007e577287c90da3d74172596f735
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291 Commits

Author SHA1 Message Date
tison
f9db5ff0d6 build(deps): upgrade opendal to 0.46 (#4037) 
* build(deps): upgrade opendal to 0.46

Signed-off-by: tison <wander4096@gmail.com>

* migrate writes

Signed-off-by: tison <wander4096@gmail.com>

* migrate reads

Signed-off-by: tison <wander4096@gmail.com>

* fixup object safety

Signed-off-by: tison <wander4096@gmail.com>

* fixup names

Signed-off-by: tison <wander4096@gmail.com>

* fixup compilation

Signed-off-by: tison <wander4096@gmail.com>

* fixup compilation

Signed-off-by: tison <wander4096@gmail.com>

* a few Buffer to Vec

Signed-off-by: tison <wander4096@gmail.com>

* Make greptime buildable with opendal 0.46 (#5)

Signed-off-by: Xuanwo <github@xuanwo.io>

* fixup toml check

Signed-off-by: tison <wander4096@gmail.com>

* test_orc_opener

Signed-off-by: tison <wander4096@gmail.com>

* Fix lru cache (#6)

Signed-off-by: Xuanwo <github@xuanwo.io>

* clippy

Signed-off-by: tison <wander4096@gmail.com>

* improve comments

Signed-off-by: tison <wander4096@gmail.com>

* address comments

Signed-off-by: tison <wander4096@gmail.com>

* reduce buf copy

Signed-off-by: tison <wander4096@gmail.com>

* upgrade to reqwest 0.12

Signed-off-by: tison <wander4096@gmail.com>

---------

Signed-off-by: tison <wander4096@gmail.com>
Signed-off-by: Xuanwo <github@xuanwo.io>
Co-authored-by: Xuanwo <github@xuanwo.io>
 2024-05-27 09:12:23 +00:00
Weny Xu
389ded93d1 chore: add logs for setting the region to writable (#4044) 
* chore: add logs for setting the region to writable

* fix: ignore redundant logs
 2024-05-27 04:01:40 +00:00
Weny Xu
5df3d4e5da feat: implement the LogStoreRawEntryReader and RawEntryReaderFilter (#4030) 
* feat: implement the `LogStoreRawEntryReader`

* feat: implement the `RawEntryReaderFilter`

* test: add tests
 2024-05-24 11:53:15 +00:00
Weny Xu
466f7c6448 feat: add RawEntryReader and OneshotWalEntryReader trait (#4027) 
* feat: add `RawEntryReader` and `OneShotWalEntryReader` trait

* chore: rename `OneShot` to `Oneshot`

* refacotr: remove `region_id` from `OneshotWalEntryReader`
 2024-05-24 06:30:50 +00:00
Yingwen
dfc1acbb2a fix: notifies all workers once a region is flushed (#4016) 
* fix: notify workers to handle stalled requests if flush is finished

* chore: change stalled count to gauge

* feat: process stalled requests eagerly
 2024-05-23 12:45:00 +00:00
Jeremyhi
418090b464 chore: log error for detail (#4011) 
* chore: log error for detail

* chore: by cr
 2024-05-22 12:17:20 +00:00
Lei, HUANG
090b59e8d6 feat: manual compaction (#3988) 
* add compaction udf params

* wip: pass compaction options through grpc

* wip: pass compaction options all the way down to region server

* wip: window compaction task

* feat: trigger major compaction

* refactor: optimize compaction parameter parsing

* chore: rebase main

* chore: update proto

* chore: add some tests

* feat: validate catalog

* chore: fix typo and rebase main

* fix: some cr comments

* fix: file_time_bucket_span

* fix: avoid upper bound overflow

* chore: update proto
 2024-05-22 09:42:21 +00:00
shuiyisong
9e1af79637 chore: add ttl to write_cache (#4010) 
* chore: add ttl to write_cache

* chore: update test & add example config

* chore: fix typo

* chore: fix typo

* chore: fix typo
 2024-05-22 06:50:12 +00:00
Lei, HUANG
e070ba3c32 feat: respect time range when building parquet reader (#3947) 
* feat: convert timestamp range filters to predicates

* chore: rebase main

* fix: remove prediactes once they have been added to timestamp filters to avoid duplicate filtering

* fix: some comments

* fix: resolve conflicts
 2024-05-21 16:02:25 +00:00
maco
40c585890a refactor: replace Expr with datafusion::Expr (#3995) 
* refactor: replace Expr with datafusion::Expr

* fix: fmt-toml

* fix: cr comment
 2024-05-21 06:40:29 +00:00
Yingwen
179c8c716c feat: Adds RegionScanner trait (#3948) 
* feat: define region scanner

* feat: single partition scanner

* feat: use single partition scanner

* feat: implement ExecutionPlan wip

* feat: mito engine returns single partition scanner

* feat: implement DisplayAs for region server

* feat: dummy table provider use handle_partitioned_query()

* test: update sqlness test

* feat: table provider use ReadFromRegion

* refactor: remove StreamScanAdapter

* chore: update lock

* style: fix clippy

* refactor: remove handle_query from the RegionEngine trait

* chore: address CR comments

* refactor: rename methods

* refactor: rename ReadFromRegion to RegionScanExec
 2024-05-20 11:52:00 +00:00
Yingwen
df13832a59 feat: use cache in compaction (#3982) 2024-05-20 02:36:51 +00:00
Eugene Tolbakov
6a9a92931d chore: change binary array type from LargeBinaryArray to BinaryArray (#3924) 
* chore: change binary array type from LargeBinaryArray to BinaryArray

* fix: adjust try_into_vector logic

* fix: apply CR suggestions, add tests

* chore: fix failing test

* chore: fix integration test

* chore: adjust the assertions according to changed implementation

* chore: add a test with LargeBinary type

* chore: apply CR suggestions

* chore: simplify tests
 2024-05-18 08:04:41 +00:00
Ruihang Xia
5c0a530ad1 feat: skip read-only region when trying to flush on region full (#3966) 
* feat: skip read-only region when trying to flush on region full

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* improve log

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* also skip in periodically

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2024-05-16 14:56:43 +00:00
Lei, HUANG
c04d02460f fix(metric engine): label mismatch in metric engine (#3927) 
* fix: label mismatch

* test: add unit test

* chore: avoid updating full primary keys

* fix: style

* chore: add some doc for PkIndexMap

* chore: update some doc
 2024-05-14 12:58:22 +00:00
Ruihang Xia
115c74791d build(deps): bump snafu to 0.8 (#3911) 
* change Cargo.toml

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* global replace

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* handle alias in script engine

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix clippy

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2024-05-10 13:36:25 +00:00
Yingwen
5a0629eaa0 feat: Parquet reader builder supports building multiple ranges to read (#3841) 
* chore: change `&mut self` to `&self`

* feat: define partition and partition context

* refactor: move precise_filter to PartitionContext

* feat: filter  wip

* feat: compute projection and fields in format

* feat: use RowGroupReader to implement ParquetReader

* fix: use expected meta to get column id for filters

* feat: partition returns row group reader

* style: fix clippy

* feat: add build partitions method

* docs: comment

* refactor: rename Partition to FileRange

* chore: address CR comments

* feat: avoid allocating column ids while constructing ReadFormat
 2024-05-10 07:39:38 +00:00
Yingwen
9d8f72d611 fix: add data type to vector cache key (#3876) 
* test: test for null tag

* test: sqlness test

* fix: add type to vector cache key

* test: update sqlness test
 2024-05-08 06:30:28 +00:00
Ruihang Xia
530353785c refactor: remove re-export from logging (#3865) 
* refactor: remove re-export from logging

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix merge problem

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* run formatter

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2024-05-06 13:26:01 +00:00
Lei, HUANG
f3b68253c2 chore: remove one slice copy in wal encoding (#3861) 
* chore: remove one slice copy in wal encoding

Signed-off-by: Lei, HUANG <mrsatangel@gmail.com>

* fix: cr comments

---------

Signed-off-by: Lei, HUANG <mrsatangel@gmail.com>
 2024-05-06 10:26:40 +00:00
tison
695746193b ci: reduce workflow files by merging actions (#3848) 
* ci: merge license header checker into dev ci

Signed-off-by: tison <wander4096@gmail.com>

* ci: merge nightly-funtional-tests.yml into nightly-ci.yml

Signed-off-by: tison <wander4096@gmail.com>

* fix typos

Signed-off-by: tison <wander4096@gmail.com>

---------

Signed-off-by: tison <wander4096@gmail.com>
 2024-05-01 04:44:00 +00:00
Yingwen
77fc1e6de0 fix: prune row groups correctly for columns with the same name (#3802) 
* test: add prune test case

* fix: use latest region metadata to get column id

* test: sort output
 2024-04-26 06:52:23 +00:00
Lei, HUANG
8d229dda98 chore: always obsolete wal to avoid discontinuous log entries (#3789) 2024-04-24 07:08:01 +00:00
Kould
42e7403fcc feat: support different types for CompatReader (#3745) 
* feat: support different types for `CompatReader`

* chore: only compare whether we need: (data_type)

* fix: optimize code based on review suggestions

- add unit test `test_safe_cast_to_null` to test safely cast
- add DataType to projected_fields
- remove TODO

* fix: assert_eq fail on `projection.rs`

* style: codefmt

* style: fix the code based on review suggestions
 2024-04-24 06:27:52 +00:00
Yingwen
4685b59ef1 feat: write manifests in background tasks (#3709) 
* chore: truncate wip

* feat: truncate and edit write manifest in background

* refactor: wrap in manifest context

* feat: alter write manifest in background

* chore: fix compiler errors

* feat: flush update manifest in background

* feat: compaction update manifest in background

* feat: set dropping state

* feat: reset drop state

* feat: check state before updating manifest

* test: fix compaction test

* refactor: rename method

* chore: update comment

* chore: discard state guard

* refactor: use atomic cell to store state enum

* chore: fix clippy

* chore: update toml

* chore: remove unused type alias

* feat: check state after writing manifest

* chore: address CR comments

* chore: change status code

* chore: Update src/mito2/src/region.rs

Co-authored-by: Lei, HUANG <6406592+v0y4g3r@users.noreply.github.com>

* fix: executes applier

---------

Co-authored-by: Lei, HUANG <6406592+v0y4g3r@users.noreply.github.com>
 2024-04-24 03:09:48 +00:00
Lei, HUANG
778e195f07 fix: do not remove deletion markers when window time range overlaps (#3773) 
* fix: do not remove deletion markers when window time range overlaps

* chore: fix some minor issues; add compaction test

* chore: add more test

* fix: nitpick master's nitpick
 2024-04-23 08:05:16 +00:00
Ruihang Xia
0c5f4801b7 build: update toolchain to nightly-2024-04-18 (#3740) 
* chore: update toolchain to nightly-2024-04-17

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix test clippy

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix ut

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update fuzz test

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update to nightly-2024-04-18

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* add document

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update CI

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* avoid unnecessary allow clippy attrs

Signed-off-by: tison <wander4096@gmail.com>

* help the compiler find the clone is unnecessary and make clippy happy

Signed-off-by: tison <wander4096@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
Signed-off-by: tison <wander4096@gmail.com>
Co-authored-by: tison <wander4096@gmail.com>
 2024-04-19 05:42:34 +00:00
LFC
314f2704d4 build(deps): update datafusion to latest and arrow to 51.0 (#3661) 
* chore: update datafusion

* update sqlness case of time.sql

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix: adjust range query partition

* fix: hisogram incorrect result

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix: ignore filter pushdown temporarily

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix: update limit sqlness result

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix: histogram with wrong distribution

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix: update negative ordinal sqlness case

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* feat: bump df to cd7a00b

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* resolve conflicts

* ignore test_range_filter

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix promql exec panic

* fix "select count(*)" exec error

* re-enable the "test_range_filter" test since the filter push down seems not necessary to be removed

* fix: range query schema error

* update sqlness results

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* resolve conflicts

* update datafusion, again

* fix pyo3 compile error, and update some sqlness results

* update decimal sqlness cases

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix: promql literal

* fix udaf tests

* fix filter pushdown sqlness tests

* fix?: test_cast

* fix: rspy test fail due to datafusion `sin` signature change

* rebase main to see if there are any failed tests

* debug ci

* debug ci

* debug ci

* enforce input partition

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* debug ci

* fix ci

* fix ci

* debug ci

* debug ci

* debug ci

* fix sqlness

* feat: do not return error while creating a filter

* chore: remove array from error

* chore: replace todo with unimplemented

* Update src/flow/clippy.toml

Co-authored-by: Yingwen <realevenyag@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: WUJingdi <taylor-lagrange@qq.com>
Co-authored-by: discord9 <discord9@163.com>
Co-authored-by: evenyag <realevenyag@gmail.com>
Co-authored-by: tison <wander4096@gmail.com>
 2024-04-18 12:07:18 +00:00
tison
50ae4dc174 refactor: merge RegionHandleResult into RegionHandleResponse (#3721) 
* refactor: merge RegionHandleResult into RegionHandleResponse

Signed-off-by: tison <wander4096@gmail.com>

* RegionResponse to api::region

Signed-off-by: tison <wander4096@gmail.com>

* order

Signed-off-by: tison <wander4096@gmail.com>

---------

Signed-off-by: tison <wander4096@gmail.com>
 2024-04-17 10:03:20 +00:00
Lei, HUANG
5af87baeb0 feat: add filter_deleted option to avoid removing deletion markers (#3707) 
* feat: add `filter_deleted` scan option to avoid removing deletion markers.

* refactor: move sort_batches_and_print to test_util
 2024-04-16 06:34:41 +00:00
Yingwen
2f4726f7b5 refactor: Move manifest manager lock to MitoRegion (#3689) 
* feat: remove manager inner wip

* feat: put manifest lock in region

* feat: don't update manifest if manager is stopped

* chore: address CR comments
 2024-04-15 05:48:25 +00:00
Ruihang Xia
aab7367804 feat: try get pk values from cache when applying predicate to parquet (#3286) 
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: tison <wander4096@gmail.com>
 2024-04-09 12:53:38 +00:00
tison
2c0c7759ee feat: add checksum for checkpoint data (#3651) 
* feat: add checksum for checkpoint data

Signed-off-by: tison <wander4096@gmail.com>

* add test

Signed-off-by: tison <wander4096@gmail.com>

* clippy

Signed-off-by: tison <wander4096@gmail.com>

* fix: checksum should calculate on uncompressed data

Signed-off-by: tison <wander4096@gmail.com>

* address comments

Signed-off-by: tison <wander4096@gmail.com>

---------

Signed-off-by: tison <wander4096@gmail.com>
 2024-04-09 08:32:24 +00:00
Yingwen
3e1a125732 feat: add append mode to table options (#3624) 
* feat: add append mode to table options

* test: add append mode test

* test: rename test tables

* chore: Add delete test for append mode
 2024-04-08 13:42:58 +00:00
Yingwen
89db8c18c8 feat: Add timers to more mito methods (#3659) 
* feat: add timers for more mito methods

* refactor: combine methods to get type name
 2024-04-08 05:53:34 +00:00
LFC
aa0af6135d chore: add manifest related metrics (#3634) 
* chore: add two manifest related metrics

* Update src/mito2/src/manifest/manager.rs

Co-authored-by: Yingwen <realevenyag@gmail.com>

* Update src/mito2/src/metrics.rs

Co-authored-by: Yingwen <realevenyag@gmail.com>

* fix: resolve PR comments

* update cargo lock

---------

Co-authored-by: Yingwen <realevenyag@gmail.com>
 2024-04-08 05:53:08 +00:00
Lei, HUANG
ddeb73fbb7 fix: mistakely removes compaction inputs on failure (#3635) 
* fix: mistakely removes compaction inputs on failure

* test: add test for compaction failure

---------

Co-authored-by: evenyag <realevenyag@gmail.com>
 2024-04-03 11:54:20 +00:00
Yingwen
bfd32571d9 fix: run purge jobs in another scheduler (#3621) 2024-04-01 03:18:14 +00:00
Yingwen
ffbb132f27 feat: Implement an unordered scanner for append mode (#3598) 
* feat: ScanInput

* refactor: seq scan use scan input

* chore: implement unordered scan

* feat: use unordered scan for append table

* fix: unordered scan panic

* docs: update mermaid

* chore: address comment

---------

Co-authored-by: Lei, HUANG <6406592+v0y4g3r@users.noreply.github.com>
 2024-03-29 07:25:35 +00:00
Yingwen
922b1a9b66 feat: Implement append mode for a region (#3558) 
* feat: add dedup option to merge reader

* test: test merger

* feat: append mode option

* feat: implement append mode for regions

* feat: only allow put under append mode

* feat: always create builder

* test: test append mode

* style: fix clippy

* test: trigger compaction

* chore: fix compiler errors
 2024-03-27 03:21:22 +00:00
dimbtp
dd18d8c97b build(deps): remove some unused dependencies (#3582) 
* build(deps): remove some unused dependencies

* add `arc-swap` dependency back
 2024-03-26 12:48:28 +00:00
Ruihang Xia
74565151e9 fix: update pk_cache in compat reader (#3576) 
* fix: update pk_cache in compat reader

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* add sqlness case

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update document

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* add more sqlness case

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* avoid mysterious bug

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2024-03-26 08:31:00 +00:00
Ruihang Xia
2b2fd80bf4 feat: return new added columns in region server's extension response (#3533) 
* feat: adapt the new proto response

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update interfaces

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* write columns to extension

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* use physical column's schema

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* sort logical columns by name

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* format code

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* return physical table's column

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* Update src/common/meta/src/datanode_manager.rs

Co-authored-by: JeremyHi <jiachun_feng@proton.me>

* implement sort column logic

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* proxy create table procedure to create logical table

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* add unit test for sort_columns

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update sqlness cases

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

---------

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: JeremyHi <jiachun_feng@proton.me>
 2024-03-23 09:31:16 +00:00
Lei, HUANG
1f0fc40287 fix: performance degradation caused by config change (#3556) 2024-03-21 12:23:52 +00:00
Yingwen
39b69f1e3b refactor!: Renames the new memtable to PartitionTreeMemtable (#3547) 
* refactor: rename mod merge_tree to partition_tree

* refactor: rename merge_tree

* refactor: change merge tree comment

* refactor: rename merge tree struct

* refactor: memtable options
 2024-03-20 06:40:41 +00:00
Lei, HUANG
ddbcff68dd feat: support append-only mode in time-series memtable (#3540) 
* feat: support append-only mode in time-series memtable

* fix: rename sort_and_dedup to sort
 2024-03-19 20:37:54 +00:00
Yingwen
641592644d feat: support per table memtable options (#3524) 
* feat: add memtable builder to region

* refactor: rename memtable_builder in worker to default_memtable_builder

* fix: return error instead of using default compaction options

Support deserializing memtable and compaction options from the option
map

* feat: optional memtable options

* feat: add MemtableBuilderProvider to create builders

* feat: change default memtable and skip deserializing dedup

* chore: update test and comment

* chore: test invalid type

* feat: metric engine use new memtable manually

* feat: expose more memtable configs

* feat: add memtable options to valid option list

* test: add test

* test: sqlness test

* chore: serde workspace

* chore: remove comments
 2024-03-19 08:50:10 +00:00
Yingwen
74862f8c3f feat(mito): Checks whether a region should flush periodically (#3459) 
* feat: handle flush periodically

* chore: call periodical method in loop

* feat: check periodical tasks on channel timeout

* refactor: use time provider to get time

Mock a time provider to test auto flush

* chore: fix typos

* refactor: rename mock time provider

* style: fix cilppy

* chore: address comment
 2024-03-15 06:41:28 +00:00
Yingwen
8ca9e01455 feat: Partition memtables by time if compaction window is provided (#3501) 
* feat: define time partitions

* feat: adapt time partitions to version

* feat: implement non write methods

* feat: add write one to memtable

* feat: implement write

* chore: fix warning

* fix: inner not set

* refactor: add collect_iter_timestamps

* test: test partitions

* chore: debug log

* chore: fix typos

* chore: log memtable id

* fix: empty check

* chore: log total parts

* chore: update comments
 2024-03-14 11:13:01 +00:00
Yingwen
7c895e2605 perf: more benchmarks for memtables (#3491) 
* chore: remove duplicate bench

* refactor: rename bench

* perf: add full scan bench for memtable

* feat: filter bench and add time series to bench group

* chore: comment

* refactor: rename

* style: fix clippy
 2024-03-12 12:02:58 +00:00