feat: refresh computed columns (#3938)

table.refresh_column("doubled") fills the rows of a declared column that
hold no value, in two passes per fragment: the first scans only the
unfilled
live rows to count exact gains and decide staging, the second streams
the
fragment's physical rows into a standalone column file published in one
DataReplacement -- committed under the dataset's own session -- so peak
memory is bounded by a scan batch. A row that holds a value keeps it;
deleted and already-filled rows never reach the expression, so a poison
value in them cannot fail the refresh. Refresh refuses under an LSM
write
spec, including the mem-wal catch-up flag that outlives unset and marks
retained SSTable rows.

---

<sub>Stack created with <a
href="https://github.com/github/gh-stack">GitHub Stacks CLI</a> • <a
href="https://gh.io/stacks-feedback">Give Feedback 💬</a></sub>
This commit is contained in:
Wyatt Alt
2026-08-14 14:43:41 -07:00
committed by GitHub
parent def869bb78
commit fc0d917d32
18 changed files with 1042 additions and 29 deletions
+5
View File
@@ -341,6 +341,7 @@ class Table:
async def add_computed_columns(
self, columns: list[tuple[str, str]]
) -> AddColumnsResult: ...
async def refresh_column(self, column: str) -> RefreshColumnResult: ...
async def add_columns_with_schema(self, schema: pa.Schema) -> AddColumnsResult: ...
async def alter_columns(
self, columns: list[dict[str, Any]]
@@ -686,6 +687,10 @@ class LsmWriteSpec:
class AddColumnsResult:
version: int
class RefreshColumnResult:
rows_filled: int
version: int
class AlterColumnsResult:
version: int
+3
View File
@@ -970,6 +970,9 @@ class RemoteTable(Table):
)
return LOOP.run(self._table.add_columns(transforms))
def refresh_column(self, column: str):
raise NotImplementedError("computed columns are supported only on local tables")
def alter_columns(
self, *alterations: Iterable[Dict[str, str]]
) -> AlterColumnsResult:
+68 -7
View File
@@ -176,6 +176,7 @@ if TYPE_CHECKING:
CompactionStats,
Tag,
AddColumnsResult,
RefreshColumnResult,
AddResult,
AlterColumnsResult,
UpdateFieldMetadataResult,
@@ -1943,9 +1944,10 @@ class Table(ABC):
data type is supplied.
Unlike ``transforms``, the expression is stored rather than
evaluated now: the column is committed with no values, and a
later refresh fills the rows. Declaring one therefore costs the
same on a large table as on an empty one.
evaluated now: the column is committed with no values, and rows get
them from [`refresh_column`][lancedb.table.Table.refresh_column].
Declaring one therefore costs the same on a large table as on an
empty one.
A refresh does not revisit rows it has already filled, so mutating
an input leaves the value computed at fill time; recomputing means
@@ -1967,8 +1969,37 @@ class Table(ABC):
>>> table = db.create_table("computed_demo", [{"x": 1}, {"x": 2}])
>>> table.add_columns(computed={"doubled": "x * 2"})
AddColumnsResult(version=2)
>>> table.to_arrow()["doubled"].to_pylist()
[None, None]
>>> table.refresh_column("doubled")
RefreshColumnResult(rows_filled=2, version=3)
>>> table.to_arrow().sort_by("x").to_pandas()
x doubled
0 1 2
1 2 4
"""
@abstractmethod
def refresh_column(self, column: str) -> "RefreshColumnResult":
"""
Fill the rows of a computed column that hold no value yet.
Declared with ``add_columns(computed=...)``, a column starts empty and
gets its values here. Rows appended since the last refresh are filled
by the next one; rows already filled are left as they are, so the call
is idempotent and does not observe a mutated input.
Local tables only; LanceDB Cloud and Enterprise raise
``NotImplementedError``.
Parameters
----------
column: str
The name of the computed column to fill.
Returns
-------
RefreshColumnResult
rows_filled: the number of rows given a value.
version: the new version number of the table.
"""
@abstractmethod
@@ -3984,6 +4015,11 @@ class LanceTable(Table):
) -> AddColumnsResult:
return LOOP.run(self._table.add_columns(transforms, computed=computed))
def refresh_column(self, column: str) -> "RefreshColumnResult":
"""Fill a computed column's unfilled rows. See
[`AsyncTable.refresh_column`][lancedb.AsyncTable.refresh_column]."""
return LOOP.run(self._table.refresh_column(column))
def alter_columns(
self, *alterations: Iterable[Dict[str, str]]
) -> AlterColumnsResult:
@@ -5922,8 +5958,9 @@ class AsyncTable:
column's type and inputs are derived from the expression.
Unlike ``transforms``, the expression is stored rather than
evaluated now: the column is committed with no values, and a
later refresh fills the rows.
evaluated now: the column is committed with no values, and rows get
them from
[`refresh_column`][lancedb.table.AsyncTable.refresh_column].
A refresh does not revisit rows it has already filled, so mutating
an input leaves the value computed at fill time. While a
@@ -5957,6 +5994,30 @@ class AsyncTable:
else:
return await self._inner.add_columns(list(transforms.items()))
async def refresh_column(self, column: str) -> RefreshColumnResult:
"""
Fill the rows of a computed column that hold no value yet.
Declared with ``add_columns(computed=...)``, a column starts empty and
gets its values here. Rows appended since the last refresh are filled
by the next one; rows already filled are left as they are, so the call
is idempotent and does not observe a mutated input.
Local tables only; LanceDB Cloud and Enterprise raise
``NotImplementedError``.
Parameters
----------
column: str
The name of the computed column to fill.
Returns
-------
RefreshColumnResult
The number of rows filled and the new version of the table.
"""
return await self._inner.refresh_column(column)
async def alter_columns(
self, *alterations: Iterable[dict[str, Any]]
) -> AlterColumnsResult:
+19 -4
View File
@@ -3856,16 +3856,20 @@ async def test_async_search_runs_embedding_on_dedicated_executor(
)
def test_computed_column_declares_all_null(tmp_path):
def test_computed_column_declare_and_refresh(tmp_path):
db = lancedb.connect(tmp_path)
table = db.create_table("computed", [{"x": 1}, {"x": 2}])
table.add_columns(computed={"doubled": "x * 2"})
assert table.to_arrow()["doubled"].to_pylist() == [None, None]
# The declaration is durable field metadata.
field = table.schema.field("doubled")
assert field.metadata[b"computed_column.expression"] == b"x * 2"
result = table.refresh_column("doubled")
assert result.rows_filled == 2
assert sorted(table.to_arrow()["doubled"].to_pylist()) == [2, 4]
table.add([{"x": 5}])
assert table.refresh_column("doubled").rows_filled == 1
assert sorted(table.to_arrow()["doubled"].to_pylist()) == [2, 4, 10]
def test_computed_column_rejects_transforms_and_computed_together(tmp_path):
@@ -3873,3 +3877,14 @@ def test_computed_column_rejects_transforms_and_computed_together(tmp_path):
table = db.create_table("computed_mixed", [{"x": 1}])
with pytest.raises(ValueError):
table.add_columns({"a": "x + 1"}, computed={"b": "x * 2"})
@pytest.mark.asyncio
async def test_computed_column_async(tmp_path):
db = await lancedb.connect_async(tmp_path)
table = await db.create_table("computed_async", [{"x": 3}])
await table.add_columns(computed={"tripled": "x * 3"})
await table.refresh_column("tripled")
assert (await table.to_arrow())["tripled"].to_pylist() == [9]
+3 -1
View File
@@ -16,7 +16,8 @@ use query::{FTSQuery, HybridQuery, Query, VectorQuery};
use session::Session;
use table::{
AddColumnsResult, AddResult, AlterColumnsResult, DeleteResult, DropColumnsResult, FtsToken,
LsmWriteSpec, MergeResult, PyBlobFile, Table, UpdateFieldMetadataResult, UpdateResult,
LsmWriteSpec, MergeResult, PyBlobFile, RefreshColumnResult, Table, UpdateFieldMetadataResult,
UpdateResult,
};
pub mod arrow;
@@ -57,6 +58,7 @@ pub fn _lancedb(_py: Python, m: &Bound<'_, PyModule>) -> PyResult<()> {
m.add_class::<VectorQuery>()?;
m.add_class::<RecordBatchStream>()?;
m.add_class::<AddColumnsResult>()?;
m.add_class::<RefreshColumnResult>()?;
m.add_class::<AlterColumnsResult>()?;
m.add_class::<UpdateFieldMetadataResult>()?;
m.add_class::<AddResult>()?;
+34
View File
@@ -415,6 +415,32 @@ pub struct AddColumnsResult {
pub version: u64,
}
#[pyclass(get_all, from_py_object)]
#[derive(Clone, Debug)]
pub struct RefreshColumnResult {
pub rows_filled: u64,
pub version: u64,
}
#[pymethods]
impl RefreshColumnResult {
pub fn __repr__(&self) -> String {
format!(
"RefreshColumnResult(rows_filled={}, version={})",
self.rows_filled, self.version
)
}
}
impl From<lancedb::table::RefreshColumnResult> for RefreshColumnResult {
fn from(result: lancedb::table::RefreshColumnResult) -> Self {
Self {
rows_filled: result.rows_filled,
version: result.version,
}
}
}
#[pymethods]
impl AddColumnsResult {
pub fn __repr__(&self) -> String {
@@ -1525,6 +1551,14 @@ impl Table {
})
}
pub fn refresh_column(self_: PyRef<'_, Self>, column: String) -> PyResult<Bound<'_, PyAny>> {
let inner = self_.inner_ref()?.clone();
future_into_py(self_.py(), async move {
let result = inner.refresh_column(column).await.infer_error()?;
Ok(RefreshColumnResult::from(result))
})
}
pub fn add_columns_with_schema(
self_: PyRef<'_, Self>,
schema: PyArrowType<Schema>,