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Ten merges and renames, all in one direction: fewer pages, each covering a whole subject. Table absorbs schema evolution and versioning. Vector search absorbs multi-vector. Explain absorbs explain analyze. Reranking was seven pages -- an overview and six rerankers of a few dozen lines each -- and is now one. The vector index page absorbs quantization, which was only ever a parameter of it. Indexing moves to Manage, where the other catalog objects are. The operational half stays in Operate as one Indexing page, absorbing GPU indexing -- which was filed in sophon despite importing lancedb's snippets and being mostly open-source content with one Enterprise-badged section. Performance was a single page aggregating tips for four unrelated operations, which is hard to keep current. Each section now sits with the operation it is about: ingestion tips on Insert, index tips on Indexing, compaction tips on Compaction, query tips on Search. Data Types leaves Concepts. The type reference belongs in the SQL reference, which already described the same types from the query side; Table now carries a short summary that points there. The multimodal material it had absorbed is its own page again, since storing blobs is a task rather than a type definition. Query becomes Semantic Search, Branches becomes Branch, and the Enterprise Security page becomes Compliance. Redirects cover every moved URL, and 30 files were repointed at the merged anchors.
191 lines
7.7 KiB
Plaintext
191 lines
7.7 KiB
Plaintext
---
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title: "PyTorch Integration"
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sidebarTitle: "PyTorch integration"
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description: Learn how to use LanceDB with PyTorch for training and inference.
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icon: fire
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---
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LanceDB provides a seamless integration with PyTorch for training and inference. This allows you to use LanceDB as a backend for your PyTorch models, and to use PyTorch for training and inference. You can use LanceDB to store your data, and PyTorch to train your models.
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## Quickstart {#quickstart}
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The `Table` class in LanceDB implements a contract for a PyTorch
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[Dataset](https://docs.pytorch.org/docs/stable/data.html#torch.utils.data.Dataset).
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This means you can simply use a LanceDB table in a PyTorch dataloader directly.
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```py Python icon=Python
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import lancedb
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import torch
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import pyarrow as pa
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from lancedb.util import tbl_to_tensor
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mem_db = lancedb.connect("memory://")
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table = mem_db.create_table("test_table", pa.table({"a": range(1000)}))
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# Any LanceDB table can be used as a PyTorch Dataset
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dataloader = torch.utils.data.DataLoader(
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table, batch_size=1024, shuffle=True, collate_fn=tbl_to_tensor
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)
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for batch in dataloader:
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print(batch)
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```
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Although the `Table` class in LanceDB implements the `torch.utils.data.Dataset` interface, you may find that using
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a table [Permutation](/training/) is more flexible.
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```py Python icon=Python
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from lancedb.permutation import Permutation
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permutation = Permutation.identity(table)
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dataloader = torch.utils.data.DataLoader(permutation)
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```
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## Output Formats {#output-formats}
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By default, a `Table` data loader will emit Arrow data. `collate_fn` is PyTorch's batching hook: PyTorch calls it to
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turn the fetched items into one batch. PyTorch's default collate function only knows how to combine tensors, NumPy
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arrays, numbers, dicts, and lists, so it does not accept Arrow data directly. When using a `Table` directly, pass
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LanceDB's `lancedb.util.tbl_to_tensor` helper as PyTorch's `collate_fn`; it converts numeric Arrow columns into a
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column-major `torch.Tensor` with shape `(columns, rows)`.
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`Permutation` works differently: its default output is a list of Python dicts, which PyTorch's default collate function
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can batch into a dict of tensors. This is usually more convenient when you are getting started. However, there is a
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significant performance penalty converting from Arrow, Lance's internal representation, to this default format. If you
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want the default PyTorch dict-of-tensors behavior, use a `Permutation` as-is; if you want direct Arrow-to-tensor
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conversion, either pass `lancedb.util.tbl_to_tensor` as `collate_fn` with a direct `Table` or configure a `Permutation`
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with one of the transform formats described below.
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To address this, the `Permutation` class provides a set of builtin transform functions that can be applied to map
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the Arrow data in different ways. The `arrow` and `polars` formats will always avoid data copies. However, `numpy`,
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`pandas`, and `torch_col` formats will also avoid data copies in most cases. The `python`, `python_col`, and
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`torch` formats will all require at least one full copy of the data and are the slowest options.
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### Using the torch column format with a torch data loader {#using-the-torch-column-format-with-a-torch-data-loader}
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The `torch_col` format is the most efficient way to convert from Arrow to a `torch.Tensor`. It will convert the
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entire Arrow batch to a _column-major_ `torch.Tensor`. In other words, given C columns and R rows, the resulting
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Tensor will have shape `(C, R)`. However, this format generates an error if you are using a
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`torch.utils.data.DataLoader` with the default collation function:
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```py Python icon=Python
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TypeError: stack(): argument 'tensors' (position 1) must be tuple of Tensors, not Tensor
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```
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This error occurs because the default collation function does not currently expect a single two-dimensional tensor.
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It expects a list of tensors which it will then stack. This is what is output by the `torch` format but that format
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requires a data copy. To avoid this error, and avoid data copies, you will need to provide a custom collation function
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in addition to specifying the `torch_col` format.
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```py Python icon=Python
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from lancedb.permutation import Permutation
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permutation = Permutation.identity(table).with_format("torch_col")
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dataloader = torch.utils.data.DataLoader(permutation, collate_fn=lambda x: x)
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```
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This will now output a single two-dimensional tensor for each batch.
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## Selecting columns {#selecting-columns}
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By default, the `Table` class will return all columns in the table when used as input to PyTorch. If you only need
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a subset of columns, you can significantly reduce your I/O requirements by selecting only the columns you need. The
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`Permutation` class provides a `select_columns` method that provides this functionality.
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```py Python icon=Python
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from lancedb.permutation import Permutation
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permutation = Permutation.identity(table).select_columns(["id", "prompt"])
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dataloader = torch.utils.data.DataLoader(
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permutation, batch_size=1024, shuffle=True
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)
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for batch in dataloader:
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print(batch.schema)
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```
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## Using multiple DataLoader workers {#using-multiple-dataloader-workers}
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Set `num_workers > 0` to read from LanceDB in multiple PyTorch worker processes. LanceDB tables and `Permutation` objects are picklable, so each worker reopens the table after it starts.
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Prefer the `forkserver` start method when using multiple workers. LanceDB uses internal threads, so the default `fork` method is unsafe; `forkserver` avoids that while being cheaper to start than `spawn`, and it is set to become the Python default. See [the performance guide](/search#performance) for more multiprocessing guidance.
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<Note>
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`forkserver` is only available on POSIX systems (Linux and macOS). On Windows, use `spawn` instead — it is the only start method available there.
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</Note>
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```py Python icon=Python
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import torch
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from lancedb.permutation import Permutation
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permutation = Permutation.identity(table)
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dataloader = torch.utils.data.DataLoader(
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permutation,
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batch_size=1024,
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shuffle=True,
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num_workers=4,
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multiprocessing_context="forkserver",
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persistent_workers=True,
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)
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```
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### Remote tables in DataLoader workers {#remote-tables-in-dataloader-workers}
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Remote LanceDB Enterprise tables (`db://...`) work the same way: workers reopen the table from the pickled connection state.
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```py Python icon=Python
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import lancedb
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import torch
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from lancedb.util import tbl_to_tensor
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db = lancedb.connect(
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"db://my-database",
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api_key="sk-...",
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region="us-east-1",
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)
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table = db.open_table("my_table")
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dataloader = torch.utils.data.DataLoader(
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table,
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batch_size=512,
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num_workers=4,
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multiprocessing_context="forkserver",
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collate_fn=tbl_to_tensor,
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)
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```
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<Note>
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This sends the connection state, including the API key, to each worker. Use a connection factory if credentials should be loaded inside the worker or your `client_config` contains a non-serializable `header_provider`.
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</Note>
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### Providing a custom connection factory {#providing-a-custom-connection-factory}
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`Permutation.with_connection_factory` lets each worker reopen the base table with custom logic. The factory takes the table name, returns a LanceDB table, and must be picklable.
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```py Python icon=Python
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import os
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import lancedb
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import torch
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from lancedb.permutation import Permutation
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def open_table(name: str):
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db = lancedb.connect(
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"db://my-database",
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api_key=os.environ["LANCEDB_API_KEY"],
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region="us-east-1",
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)
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return db.open_table(name)
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table = open_table("my_table")
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permutation = (
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Permutation.identity(table)
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.with_connection_factory(open_table)
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)
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dataloader = torch.utils.data.DataLoader(
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permutation,
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batch_size=512,
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num_workers=4,
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multiprocessing_context="forkserver",
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)
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```
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