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## Summary - Complete the SQL reference: `ATTACH DATABASE`, the `CHANGES` clause, and `dedupe()`/`duplicate_pairs()` (verified against current sophon source; these were recently renamed from `vector_dedup`/`vector_duplicate_pairs`). Fix the blob-column default-projection claim and add the previously undocumented `blob_descriptor()`. - Enrich the gated Functions draft (still `.mintignore`'d, pre-release): chained Functions over blob outputs, GPU-produced blobs, Secrets, multi-input/output binding, `code=[module]` packaging. - Upgrade the materialized-view and computed-column auto-refresh drafts with precise, verified catch-up semantics, and add the missing `ALTER MATERIALIZED VIEW` / `CREATE ... WITH(...)` sections (also gated — the automatic-refresh scheduler is still dev/staging-only). - Thread one running example (video frames → GPU extract/caption → dedup → auto-refreshing materialized view) through Functions, materialized views, and the LeRobotDataset integration guide instead of a separate tutorial. - Rename "LanceDB OSS"/"OSS" to "LanceDB Embedded"/"Embedded" throughout (52 files); activate the existing availability-comparison mechanism on `basics/offerings.mdx` for a full feature-by-feature comparison table.
124 lines
5.9 KiB
Plaintext
124 lines
5.9 KiB
Plaintext
---
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title: "Permutation"
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sidebarTitle: "Permutation"
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description: "The low-level, customizable row ordering that StreamingDataset is built on."
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icon: shuffle
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availability:
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embedded: available
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enterprise: available
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---
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Most model training frameworks feed data into a model by sequencing through successive batches, a process
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often referred to as **data loading**. The simplest way to perform data loading is to read a LanceDB table in batches,
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in the order its rows are stored, through an identity `Permutation`. A table itself is not iterable.
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<CodeGroup>
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```py Python icon=Python
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import lancedb
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from lancedb.permutation import Permutation
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db = lancedb.connect("file://some/db/path")
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table = db.open_table("some_table")
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for batch in Permutation.identity(table).with_format("arrow").iter(batch_size=1024):
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print(batch.to_pydict())
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```
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</CodeGroup>
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In specific use cases, you may need the flexibility to shuffle, split, and select data without using the full
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[`StreamingDataset`](/training/data-loading) object. In these cases, use `Permutation`, the lower-level
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functionality `StreamingDataset` is built on. A `Permutation` defines a customizable row ordering, and supports
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map-style access through `__getitem__()` and batched access through `__getitems__()`.
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## Version Pinning {#version-pinning}
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A `Permutation` is pinned to the version of its base table at the time it was constructed, and every read (including future reads
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from a `StreamingDataset` that wraps it, and every DataLoader worker after it starts) resolves against that pinned
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version. This makes iteration deterministic across compactions and worker restarts: the permutation only addresses rows
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that existed when it was built, and rows appended to the base table afterwards are not visible through the existing
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permutation.
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To include newly appended rows, build a new `Permutation` (and any `StreamingDataset` that depends on it)
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against the updated table. Permutations written before this behavior shipped continue to
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read as they did before.
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## Output formats {#output-formats}
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By default, a `Table` data loader emits Arrow data. `collate_fn` is PyTorch's batching hook: PyTorch calls it to
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turn the fetched items into one batch. PyTorch's default collate function only knows how to combine tensors, NumPy
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arrays, numbers, dicts, and lists, so it does not accept Arrow data directly. When using a `Table` directly, pass
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LanceDB's `lancedb.util.tbl_to_tensor` helper as PyTorch's `collate_fn`; it converts numeric Arrow columns into a
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column-major `torch.Tensor` with shape `(columns, rows)`.
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`Permutation` works differently: its default output is a list of Python dicts, which PyTorch's default collate function
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can batch into a dict of tensors. This is usually more convenient when you are getting started. However, there is a
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significant performance penalty converting from Arrow, Lance's internal representation, to this default format. If you
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want the default PyTorch dict-of-tensors behavior, use a `Permutation` as-is; if you want direct Arrow-to-tensor
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conversion, either pass `lancedb.util.tbl_to_tensor` as `collate_fn` with a direct `Table` or configure a `Permutation`
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with one of the transform formats described below.
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To address this, the `Permutation` class provides a set of builtin transform functions that can be applied to map
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the Arrow data in different ways. The `arrow` and `polars` formats will always avoid data copies. However, `numpy`,
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`pandas`, and `torch_col` formats will also avoid data copies in most cases. The `python`, `python_col`, and
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`torch` formats will all require at least one full copy of the data and are the slowest options.
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### Using the torch column format with a torch data loader {#using-the-torch-column-format-with-a-torch-data-loader}
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The `torch_col` format is the most efficient way to convert from Arrow to a `torch.Tensor`. It will convert the
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entire Arrow batch to a _column-major_ `torch.Tensor`. In other words, given C columns and R rows, the resulting
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Tensor will have shape `(C, R)`. However, this format generates an error if you are using a
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`torch.utils.data.DataLoader` with the default collation function:
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```text
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TypeError: stack(): argument 'tensors' (position 1) must be tuple of Tensors, not Tensor
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```
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This error occurs because the default collation function does not currently expect a single two-dimensional tensor.
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It expects a list of tensors which it will then stack. This is what is output by the `torch` format but that format
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requires a data copy. To avoid this error, and avoid data copies, you will need to provide a custom collation function
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in addition to specifying the `torch_col` format.
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```py Python icon=Python
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from lancedb.permutation import Permutation
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permutation = Permutation.identity(table).with_format("torch_col")
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dataloader = torch.utils.data.DataLoader(permutation, collate_fn=lambda x: x)
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```
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This will now output a single two-dimensional tensor for each batch.
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## Selecting columns {#selecting-columns}
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By default, the `Table` class will return all columns in the table when used as input to PyTorch. If you only need
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a subset of columns, you can significantly reduce your I/O requirements by selecting only the columns you need. The
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`Permutation` class provides a `select_columns` method that provides this functionality.
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```py Python icon=Python
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import lancedb
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import pyarrow as pa
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import torch
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from lancedb.permutation import Permutation
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db = lancedb.connect("memory://")
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prompts = db.create_table(
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"prompts",
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pa.table(
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{
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"id": range(4),
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"prompt": ["north", "south", "east", "west"],
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"embedding": [[0.1, 0.2], [0.3, 0.4], [0.5, 0.6], [0.7, 0.8]],
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}
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),
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)
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permutation = Permutation.identity(prompts).select_columns(["id", "prompt"])
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dataloader = torch.utils.data.DataLoader(
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permutation, batch_size=1024, shuffle=True
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)
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for batch in dataloader:
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print(sorted(batch)) # ['id', 'prompt']: the embedding is never read
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```
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Each batch is a dict of the selected columns, the default `Permutation` format described above.
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