Join multiline postgres logs in compute_ctl (#5903)

Postgres can write multiline logs, and they are difficult to handle
after they are mixed with other logs. This PR combines multiline logs
from postgres into a single line, where previous line breaks are
replaced with unicode zero-width spaces. Then postgres logs are written
to stderr with `PG:` prefix.

It makes it easy to distinguish postgres logs from all other compute
logs with a simple grep, e.g. `|= "PG:"`

compute_tools/src/bin/compute_ctl.rs

@@ -350,7 +350,7 @@ fn main() -> Result<()> {
 
     // Wait for the child Postgres process forever. In this state Ctrl+C will
     // propagate to Postgres and it will be shut down as well.
-    if let Some(mut pg) = pg {
+    if let Some((mut pg, logs_handle)) = pg {
         // Startup is finished, exit the startup tracing span
         drop(startup_context_guard);
 
@@ -358,6 +358,12 @@ fn main() -> Result<()> {
             .wait()
             .expect("failed to start waiting on Postgres process");
         PG_PID.store(0, Ordering::SeqCst);
+
+        // Process has exited, so we can join the logs thread.
+        let _ = logs_handle
+            .join()
+            .map_err(|e| tracing::error!("log thread panicked: {:?}", e));
+
         info!("Postgres exited with code {}, shutting down", ecode);
         exit_code = ecode.code()
     }

compute_tools/src/compute.rs

@@ -495,7 +495,7 @@ impl ComputeNode {
     pub fn sync_safekeepers(&self, storage_auth_token: Option<String>) -> Result<Lsn> {
         let start_time = Utc::now();
 
-        let sync_handle = maybe_cgexec(&self.pgbin)
+        let mut sync_handle = maybe_cgexec(&self.pgbin)
             .args(["--sync-safekeepers"])
             .env("PGDATA", &self.pgdata) // we cannot use -D in this mode
             .envs(if let Some(storage_auth_token) = &storage_auth_token {
@@ -504,18 +504,30 @@ impl ComputeNode {
                 vec![]
             })
             .stdout(Stdio::piped())
+            .stderr(Stdio::piped())
             .spawn()
             .expect("postgres --sync-safekeepers failed to start");
         SYNC_SAFEKEEPERS_PID.store(sync_handle.id(), Ordering::SeqCst);
 
         // `postgres --sync-safekeepers` will print all log output to stderr and
-        // final LSN to stdout. So we pipe only stdout, while stderr will be automatically
+        // final LSN to stdout. So we leave stdout to collect LSN, while stderr logs
-        // redirected to the caller output.
+        // will be collected in a child thread.
+        let stderr = sync_handle
+            .stderr
+            .take()
+            .expect("stderr should be captured");
+        let logs_handle = handle_postgres_logs(stderr);
+
         let sync_output = sync_handle
             .wait_with_output()
             .expect("postgres --sync-safekeepers failed");
         SYNC_SAFEKEEPERS_PID.store(0, Ordering::SeqCst);
 
+        // Process has exited, so we can join the logs thread.
+        let _ = logs_handle
+            .join()
+            .map_err(|e| tracing::error!("log thread panicked: {:?}", e));
+
         if !sync_output.status.success() {
             anyhow::bail!(
                 "postgres --sync-safekeepers exited with non-zero status: {}. stdout: {}",
@@ -652,11 +664,12 @@ impl ComputeNode {
 
     /// Start Postgres as a child process and manage DBs/roles.
     /// After that this will hang waiting on the postmaster process to exit.
+    /// Returns a handle to the child process and a handle to the logs thread.
     #[instrument(skip_all)]
     pub fn start_postgres(
         &self,
         storage_auth_token: Option<String>,
-    ) -> Result<std::process::Child> {
+    ) -> Result<(std::process::Child, std::thread::JoinHandle<()>)> {
         let pgdata_path = Path::new(&self.pgdata);
 
         // Run postgres as a child process.
@@ -667,13 +680,18 @@ impl ComputeNode {
             } else {
                 vec![]
             })
+            .stderr(Stdio::piped())
             .spawn()
             .expect("cannot start postgres process");
         PG_PID.store(pg.id(), Ordering::SeqCst);
 
+        // Start a thread to collect logs from stderr.
+        let stderr = pg.stderr.take().expect("stderr should be captured");
+        let logs_handle = handle_postgres_logs(stderr);
+
         wait_for_postgres(&mut pg, pgdata_path)?;
 
-        Ok(pg)
+        Ok((pg, logs_handle))
     }
 
     /// Do initial configuration of the already started Postgres.
@@ -818,7 +836,10 @@ impl ComputeNode {
     }
 
     #[instrument(skip_all)]
-    pub fn start_compute(&self, extension_server_port: u16) -> Result<std::process::Child> {
+    pub fn start_compute(
+        &self,
+        extension_server_port: u16,
+    ) -> Result<(std::process::Child, std::thread::JoinHandle<()>)> {
         let compute_state = self.state.lock().unwrap().clone();
         let pspec = compute_state.pspec.as_ref().expect("spec must be set");
         info!(
@@ -889,7 +910,7 @@ impl ComputeNode {
         self.prepare_pgdata(&compute_state, extension_server_port)?;
 
         let start_time = Utc::now();
-        let pg = self.start_postgres(pspec.storage_auth_token.clone())?;
+        let pg_process = self.start_postgres(pspec.storage_auth_token.clone())?;
 
         let config_time = Utc::now();
         if pspec.spec.mode == ComputeMode::Primary && !pspec.spec.skip_pg_catalog_updates {
@@ -939,7 +960,7 @@ impl ComputeNode {
         };
         info!(?metrics, "compute start finished");
 
-        Ok(pg)
+        Ok(pg_process)
     }
 
     // Look for core dumps and collect backtraces.

compute_tools/src/pg_helpers.rs

@@ -6,12 +6,15 @@ use std::io::{BufRead, BufReader};
 use std::os::unix::fs::PermissionsExt;
 use std::path::Path;
 use std::process::Child;
+use std::thread::JoinHandle;
 use std::time::{Duration, Instant};
 
 use anyhow::{bail, Result};
 use ini::Ini;
 use notify::{RecursiveMode, Watcher};
 use postgres::{Client, Transaction};
+use tokio::io::AsyncBufReadExt;
+use tokio::time::timeout;
 use tokio_postgres::NoTls;
 use tracing::{debug, error, info, instrument};
 
@@ -426,3 +429,72 @@ pub async fn tune_pgbouncer(
 
     Ok(())
 }
+
+/// Spawn a thread that will read Postgres logs from `stderr`, join multiline logs
+/// and send them to the logger. In the future we may also want to add context to
+/// these logs.
+pub fn handle_postgres_logs(stderr: std::process::ChildStderr) -> JoinHandle<()> {
+    std::thread::spawn(move || {
+        let runtime = tokio::runtime::Builder::new_current_thread()
+            .enable_all()
+            .build()
+            .expect("failed to build tokio runtime");
+
+        let res = runtime.block_on(async move {
+            let stderr = tokio::process::ChildStderr::from_std(stderr)?;
+            handle_postgres_logs_async(stderr).await
+        });
+        if let Err(e) = res {
+            tracing::error!("error while processing postgres logs: {}", e);
+        }
+    })
+}
+
+/// Read Postgres logs from `stderr` until EOF. Buffer is flushed on one of the following conditions:
+/// - next line starts with timestamp
+/// - EOF
+/// - no new lines were written for the last second
+async fn handle_postgres_logs_async(stderr: tokio::process::ChildStderr) -> Result<()> {
+    let mut lines = tokio::io::BufReader::new(stderr).lines();
+    let timeout_duration = Duration::from_secs(1);
+    let ts_regex =
+        regex::Regex::new(r"^\d+-\d{2}-\d{2} \d{2}:\d{2}:\d{2}").expect("regex is valid");
+
+    let mut buf = vec![];
+    loop {
+        let next_line = timeout(timeout_duration, lines.next_line()).await;
+
+        // we should flush lines from the buffer if we cannot continue reading multiline message
+        let should_flush_buf = match next_line {
+            // Flushing if new line starts with timestamp
+            Ok(Ok(Some(ref line))) => ts_regex.is_match(line),
+            // Flushing on EOF, timeout or error
+            _ => true,
+        };
+
+        if !buf.is_empty() && should_flush_buf {
+            // join multiline message into a single line, separated by unicode Zero Width Space.
+            // "PG:" suffix is used to distinguish postgres logs from other logs.
+            let combined = format!("PG:{}\n", buf.join("\u{200B}"));
+            buf.clear();
+
+            // sync write to stderr to avoid interleaving with other logs
+            use std::io::Write;
+            let res = std::io::stderr().lock().write_all(combined.as_bytes());
+            if let Err(e) = res {
+                tracing::error!("error while writing to stderr: {}", e);
+            }
+        }
+
+        // if not timeout, append line to the buffer
+        if next_line.is_ok() {
+            match next_line?? {
+                Some(line) => buf.push(line),
+                // EOF
+                None => break,
+            };
+        }
+    }
+
+    Ok(())
+}