mirror of
https://github.com/neondatabase/neon.git
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Move logic for ingest benchmark from GitHub workflow into python testcase (#9762)
## Problem The first version of the ingest benchmark had some parsing and reporting logic in shell script inside GitHub workflow. it is better to move that logic into a python testcase so that we can also run it locally. ## Summary of changes - Create new python testcase - invoke pgcopydb inside python test case - move the following logic into python testcase - determine backpressure - invoke pgcopydb and report its progress - parse pgcopydb log and extract metrics - insert metrics into perf test database - add additional column to perf test database that can receive endpoint ID used for pgcopydb run to have it available in grafana dashboard when retrieving other metrics for an endpoint ## Example run https://github.com/neondatabase/neon/actions/runs/11860622170/job/33056264386
This commit is contained in:
277
.github/workflows/ingest_benchmark.yml
vendored
277
.github/workflows/ingest_benchmark.yml
vendored
@@ -1,4 +1,4 @@
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name: Benchmarking
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name: benchmarking ingest
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on:
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# uncomment to run on push for debugging your PR
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@@ -74,18 +74,16 @@ jobs:
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compute_units: '[7, 7]' # we want to test large compute here to avoid compute-side bottleneck
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api_key: ${{ secrets.NEON_STAGING_API_KEY }}
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- name: Initialize Neon project and retrieve current backpressure seconds
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- name: Initialize Neon project
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if: ${{ matrix.target_project == 'new_empty_project' }}
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env:
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NEW_PROJECT_CONNSTR: ${{ steps.create-neon-project-ingest-target.outputs.dsn }}
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BENCHMARK_INGEST_TARGET_CONNSTR: ${{ steps.create-neon-project-ingest-target.outputs.dsn }}
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NEW_PROJECT_ID: ${{ steps.create-neon-project-ingest-target.outputs.project_id }}
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run: |
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echo "Initializing Neon project with project_id: ${NEW_PROJECT_ID}"
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export LD_LIBRARY_PATH=${PG_16_LIB_PATH}
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${PSQL} "${NEW_PROJECT_CONNSTR}" -c "CREATE EXTENSION IF NOT EXISTS neon; CREATE EXTENSION IF NOT EXISTS neon_utils;"
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BACKPRESSURE_TIME_BEFORE_INGEST=$(${PSQL} "${NEW_PROJECT_CONNSTR}" -t -c "select backpressure_throttling_time()/1000000;")
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echo "BACKPRESSURE_TIME_BEFORE_INGEST=${BACKPRESSURE_TIME_BEFORE_INGEST}" >> $GITHUB_ENV
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echo "NEW_PROJECT_CONNSTR=${NEW_PROJECT_CONNSTR}" >> $GITHUB_ENV
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${PSQL} "${BENCHMARK_INGEST_TARGET_CONNSTR}" -c "CREATE EXTENSION IF NOT EXISTS neon; CREATE EXTENSION IF NOT EXISTS neon_utils;"
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echo "BENCHMARK_INGEST_TARGET_CONNSTR=${BENCHMARK_INGEST_TARGET_CONNSTR}" >> $GITHUB_ENV
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- name: Create Neon Branch for large tenant
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if: ${{ matrix.target_project == 'large_existing_project' }}
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@@ -95,266 +93,55 @@ jobs:
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project_id: ${{ vars.BENCHMARK_INGEST_TARGET_PROJECTID }}
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api_key: ${{ secrets.NEON_STAGING_API_KEY }}
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- name: Initialize Neon project and retrieve current backpressure seconds
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- name: Initialize Neon project
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if: ${{ matrix.target_project == 'large_existing_project' }}
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env:
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NEW_PROJECT_CONNSTR: ${{ steps.create-neon-branch-ingest-target.outputs.dsn }}
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BENCHMARK_INGEST_TARGET_CONNSTR: ${{ steps.create-neon-branch-ingest-target.outputs.dsn }}
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NEW_BRANCH_ID: ${{ steps.create-neon-branch-ingest-target.outputs.branch_id }}
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run: |
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echo "Initializing Neon branch with branch_id: ${NEW_BRANCH_ID}"
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export LD_LIBRARY_PATH=${PG_16_LIB_PATH}
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# Extract the part before the database name
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base_connstr="${NEW_PROJECT_CONNSTR%/*}"
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base_connstr="${BENCHMARK_INGEST_TARGET_CONNSTR%/*}"
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# Extract the query parameters (if any) after the database name
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query_params="${NEW_PROJECT_CONNSTR#*\?}"
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query_params="${BENCHMARK_INGEST_TARGET_CONNSTR#*\?}"
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# Reconstruct the new connection string
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if [ "$query_params" != "$NEW_PROJECT_CONNSTR" ]; then
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if [ "$query_params" != "$BENCHMARK_INGEST_TARGET_CONNSTR" ]; then
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new_connstr="${base_connstr}/neondb?${query_params}"
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else
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new_connstr="${base_connstr}/neondb"
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fi
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${PSQL} "${new_connstr}" -c "drop database ludicrous;"
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${PSQL} "${new_connstr}" -c "CREATE DATABASE ludicrous;"
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if [ "$query_params" != "$NEW_PROJECT_CONNSTR" ]; then
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NEW_PROJECT_CONNSTR="${base_connstr}/ludicrous?${query_params}"
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if [ "$query_params" != "$BENCHMARK_INGEST_TARGET_CONNSTR" ]; then
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BENCHMARK_INGEST_TARGET_CONNSTR="${base_connstr}/ludicrous?${query_params}"
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else
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NEW_PROJECT_CONNSTR="${base_connstr}/ludicrous"
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BENCHMARK_INGEST_TARGET_CONNSTR="${base_connstr}/ludicrous"
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fi
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${PSQL} "${NEW_PROJECT_CONNSTR}" -c "CREATE EXTENSION IF NOT EXISTS neon; CREATE EXTENSION IF NOT EXISTS neon_utils;"
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BACKPRESSURE_TIME_BEFORE_INGEST=$(${PSQL} "${NEW_PROJECT_CONNSTR}" -t -c "select backpressure_throttling_time()/1000000;")
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echo "BACKPRESSURE_TIME_BEFORE_INGEST=${BACKPRESSURE_TIME_BEFORE_INGEST}" >> $GITHUB_ENV
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echo "NEW_PROJECT_CONNSTR=${NEW_PROJECT_CONNSTR}" >> $GITHUB_ENV
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- name: Create pgcopydb filter file
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run: |
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cat << EOF > /tmp/pgcopydb_filter.txt
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[include-only-table]
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public.events
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public.emails
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public.email_transmissions
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public.payments
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public.editions
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public.edition_modules
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public.sp_content
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public.email_broadcasts
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public.user_collections
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public.devices
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public.user_accounts
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public.lessons
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public.lesson_users
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public.payment_methods
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public.orders
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public.course_emails
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public.modules
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public.users
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public.module_users
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public.courses
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public.payment_gateway_keys
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public.accounts
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public.roles
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public.payment_gateways
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public.management
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public.event_names
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EOF
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${PSQL} "${BENCHMARK_INGEST_TARGET_CONNSTR}" -c "CREATE EXTENSION IF NOT EXISTS neon; CREATE EXTENSION IF NOT EXISTS neon_utils;"
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echo "BENCHMARK_INGEST_TARGET_CONNSTR=${BENCHMARK_INGEST_TARGET_CONNSTR}" >> $GITHUB_ENV
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- name: Invoke pgcopydb
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- name: Invoke pgcopydb
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uses: ./.github/actions/run-python-test-set
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with:
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build_type: remote
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test_selection: performance/test_perf_ingest_using_pgcopydb.py
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run_in_parallel: false
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extra_params: -s -m remote_cluster --timeout 86400 -k test_ingest_performance_using_pgcopydb
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pg_version: v16
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save_perf_report: true
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aws_oicd_role_arn: ${{ vars.DEV_AWS_OIDC_ROLE_ARN }}
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env:
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BENCHMARK_INGEST_SOURCE_CONNSTR: ${{ secrets.BENCHMARK_INGEST_SOURCE_CONNSTR }}
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run: |
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export LD_LIBRARY_PATH=${PGCOPYDB_LIB_PATH}:${PG_16_LIB_PATH}
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export PGCOPYDB_SOURCE_PGURI="${BENCHMARK_INGEST_SOURCE_CONNSTR}"
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export PGCOPYDB_TARGET_PGURI="${NEW_PROJECT_CONNSTR}"
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export PGOPTIONS="-c maintenance_work_mem=8388608 -c max_parallel_maintenance_workers=7"
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${PG_CONFIG} --bindir
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${PGCOPYDB} --version
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${PGCOPYDB} clone --skip-vacuum --no-owner --no-acl --skip-db-properties --table-jobs 4 \
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--index-jobs 4 --restore-jobs 4 --split-tables-larger-than 10GB --skip-extensions \
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--use-copy-binary --filters /tmp/pgcopydb_filter.txt 2>&1 | tee /tmp/pgcopydb_${{ matrix.target_project }}.log
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BENCHMARK_INGEST_SOURCE_CONNSTR: ${{ secrets.BENCHMARK_INGEST_SOURCE_CONNSTR }}
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TARGET_PROJECT_TYPE: ${{ matrix.target_project }}
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# we report PLATFORM in zenbenchmark NeonBenchmarker perf database and want to distinguish between new project and large tenant
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PLATFORM: "${{ matrix.target_project }}-us-east-2-staging"
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PERF_TEST_RESULT_CONNSTR: "${{ secrets.PERF_TEST_RESULT_CONNSTR }}"
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# create dummy pgcopydb log to test parsing
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# - name: create dummy log for parser test
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# run: |
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# cat << EOF > /tmp/pgcopydb_${{ matrix.target_project }}.log
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# 2024-11-04 18:00:53.433 500861 INFO main.c:136 Running pgcopydb version 0.17.10.g8361a93 from "/usr/lib/postgresql/17/bin/pgcopydb"
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# 2024-11-04 18:00:53.434 500861 INFO cli_common.c:1225 [SOURCE] Copying database from "postgres://neondb_owner@ep-bitter-shape-w2c1ir0a.us-east-2.aws.neon.build/neondb?sslmode=require&keepalives=1&keepalives_idle=10&keepalives_interval=10&keepalives_count=60"
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# 2024-11-04 18:00:53.434 500861 INFO cli_common.c:1226 [TARGET] Copying database into "postgres://neondb_owner@ep-icy-union-w25qd5pj.us-east-2.aws.neon.build/ludicrous?sslmode=require&keepalives=1&keepalives_idle=10&keepalives_interval=10&keepalives_count=60"
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# 2024-11-04 18:00:53.442 500861 INFO copydb.c:105 Using work dir "/tmp/pgcopydb"
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# 2024-11-04 18:00:53.541 500861 INFO snapshot.c:107 Exported snapshot "00000008-00000033-1" from the source database
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# 2024-11-04 18:00:53.556 500865 INFO cli_clone_follow.c:543 STEP 1: fetch source database tables, indexes, and sequences
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# 2024-11-04 18:00:54.570 500865 INFO copydb_schema.c:716 Splitting source candidate tables larger than 10 GB
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# 2024-11-04 18:00:54.570 500865 INFO copydb_schema.c:829 Table public.events is 96 GB large which is larger than --split-tables-larger-than 10 GB, and does not have a unique column of type integer: splitting by CTID
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# 2024-11-04 18:01:05.538 500865 INFO copydb_schema.c:905 Table public.events is 96 GB large, 10 COPY processes will be used, partitioning on ctid.
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# 2024-11-04 18:01:05.564 500865 INFO copydb_schema.c:905 Table public.email_transmissions is 27 GB large, 4 COPY processes will be used, partitioning on id.
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# 2024-11-04 18:01:05.584 500865 INFO copydb_schema.c:905 Table public.lessons is 25 GB large, 4 COPY processes will be used, partitioning on id.
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# 2024-11-04 18:01:05.605 500865 INFO copydb_schema.c:905 Table public.lesson_users is 16 GB large, 3 COPY processes will be used, partitioning on id.
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# 2024-11-04 18:01:05.605 500865 INFO copydb_schema.c:761 Fetched information for 26 tables (including 4 tables split in 21 partitions total), with an estimated total of 907 million tuples and 175 GB on-disk
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# 2024-11-04 18:01:05.687 500865 INFO copydb_schema.c:968 Fetched information for 57 indexes (supporting 25 constraints)
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# 2024-11-04 18:01:05.753 500865 INFO sequences.c:78 Fetching information for 24 sequences
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# 2024-11-04 18:01:05.903 500865 INFO copydb_schema.c:1122 Fetched information for 4 extensions
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# 2024-11-04 18:01:06.178 500865 INFO copydb_schema.c:1538 Found 0 indexes (supporting 0 constraints) in the target database
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# 2024-11-04 18:01:06.184 500865 INFO cli_clone_follow.c:584 STEP 2: dump the source database schema (pre/post data)
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# 2024-11-04 18:01:06.186 500865 INFO pgcmd.c:468 /usr/lib/postgresql/16/bin/pg_dump -Fc --snapshot 00000008-00000033-1 --section=pre-data --section=post-data --file /tmp/pgcopydb/schema/schema.dump 'postgres://neondb_owner@ep-bitter-shape-w2c1ir0a.us-east-2.aws.neon.build/neondb?sslmode=require&keepalives=1&keepalives_idle=10&keepalives_interval=10&keepalives_count=60'
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# 2024-11-04 18:01:06.952 500865 INFO cli_clone_follow.c:592 STEP 3: restore the pre-data section to the target database
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# 2024-11-04 18:01:07.004 500865 INFO pgcmd.c:1001 /usr/lib/postgresql/16/bin/pg_restore --dbname 'postgres://neondb_owner@ep-icy-union-w25qd5pj.us-east-2.aws.neon.build/ludicrous?sslmode=require&keepalives=1&keepalives_idle=10&keepalives_interval=10&keepalives_count=60' --section pre-data --jobs 4 --no-owner --no-acl --use-list /tmp/pgcopydb/schema/pre-filtered.list /tmp/pgcopydb/schema/schema.dump
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# 2024-11-04 18:01:07.438 500874 INFO table-data.c:656 STEP 4: starting 4 table-data COPY processes
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# 2024-11-04 18:01:07.451 500877 INFO vacuum.c:139 STEP 8: skipping VACUUM jobs per --skip-vacuum
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# 2024-11-04 18:01:07.457 500875 INFO indexes.c:182 STEP 6: starting 4 CREATE INDEX processes
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# 2024-11-04 18:01:07.457 500875 INFO indexes.c:183 STEP 7: constraints are built by the CREATE INDEX processes
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# 2024-11-04 18:01:07.507 500865 INFO blobs.c:74 Skipping large objects: none found.
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# 2024-11-04 18:01:07.509 500865 INFO sequences.c:194 STEP 9: reset sequences values
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# 2024-11-04 18:01:07.510 500886 INFO sequences.c:290 Set sequences values on the target database
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# 2024-11-04 20:49:00.587 500865 INFO cli_clone_follow.c:608 STEP 10: restore the post-data section to the target database
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# 2024-11-04 20:49:00.600 500865 INFO pgcmd.c:1001 /usr/lib/postgresql/16/bin/pg_restore --dbname 'postgres://neondb_owner@ep-icy-union-w25qd5pj.us-east-2.aws.neon.build/ludicrous?sslmode=require&keepalives=1&keepalives_idle=10&keepalives_interval=10&keepalives_count=60' --section post-data --jobs 4 --no-owner --no-acl --use-list /tmp/pgcopydb/schema/post-filtered.list /tmp/pgcopydb/schema/schema.dump
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# 2024-11-05 10:50:58.508 500865 INFO cli_clone_follow.c:639 All step are now done, 16h49m elapsed
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# 2024-11-05 10:50:58.508 500865 INFO summary.c:3155 Printing summary for 26 tables and 57 indexes
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# OID | Schema | Name | Parts | copy duration | transmitted bytes | indexes | create index duration
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# ------+--------+----------------------+-------+---------------+-------------------+---------+----------------------
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# 24654 | public | events | 10 | 1d11h | 878 GB | 1 | 1h41m
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# 24623 | public | email_transmissions | 4 | 4h46m | 99 GB | 3 | 2h04m
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# 24665 | public | lessons | 4 | 4h42m | 161 GB | 4 | 1m11s
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# 24661 | public | lesson_users | 3 | 2h46m | 49 GB | 3 | 39m35s
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# 24631 | public | emails | 1 | 34m07s | 10 GB | 2 | 17s
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# 24739 | public | payments | 1 | 5m47s | 1848 MB | 4 | 4m40s
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# 24681 | public | module_users | 1 | 4m57s | 1610 MB | 3 | 1m50s
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# 24694 | public | orders | 1 | 2m50s | 835 MB | 3 | 1m05s
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# 24597 | public | devices | 1 | 1m45s | 498 MB | 2 | 40s
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# 24723 | public | payment_methods | 1 | 1m24s | 548 MB | 2 | 31s
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# 24765 | public | user_collections | 1 | 2m17s | 1005 MB | 2 | 968ms
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# 24774 | public | users | 1 | 52s | 291 MB | 4 | 27s
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# 24760 | public | user_accounts | 1 | 16s | 172 MB | 3 | 16s
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# 24606 | public | edition_modules | 1 | 8s983 | 46 MB | 3 | 4s749
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# 24583 | public | course_emails | 1 | 8s526 | 26 MB | 2 | 996ms
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# 24685 | public | modules | 1 | 1s592 | 21 MB | 3 | 1s696
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# 24610 | public | editions | 1 | 2s199 | 7483 kB | 2 | 1s032
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# 24755 | public | sp_content | 1 | 1s555 | 4177 kB | 0 | 0ms
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# 24619 | public | email_broadcasts | 1 | 744ms | 2645 kB | 2 | 677ms
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# 24590 | public | courses | 1 | 387ms | 1540 kB | 2 | 367ms
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# 24704 | public | payment_gateway_keys | 1 | 1s972 | 164 kB | 2 | 27ms
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# 24576 | public | accounts | 1 | 58ms | 24 kB | 1 | 14ms
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# 24647 | public | event_names | 1 | 32ms | 397 B | 1 | 8ms
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# 24716 | public | payment_gateways | 1 | 1s675 | 117 B | 1 | 11ms
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# 24748 | public | roles | 1 | 71ms | 173 B | 1 | 8ms
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# 24676 | public | management | 1 | 33ms | 40 B | 1 | 19ms
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# Step Connection Duration Transfer Concurrency
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# -------------------------------------------------- ---------- ---------- ---------- ------------
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# Catalog Queries (table ordering, filtering, etc) source 12s 1
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# Dump Schema source 765ms 1
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# Prepare Schema target 466ms 1
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# COPY, INDEX, CONSTRAINTS, VACUUM (wall clock) both 2h47m 12
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# COPY (cumulative) both 7h46m 1225 GB 4
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# CREATE INDEX (cumulative) target 4h36m 4
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# CONSTRAINTS (cumulative) target 8s493 4
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# VACUUM (cumulative) target 0ms 4
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# Reset Sequences both 60ms 1
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# Large Objects (cumulative) (null) 0ms 0
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# Finalize Schema both 14h01m 4
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# -------------------------------------------------- ---------- ---------- ---------- ------------
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# Total Wall Clock Duration both 16h49m 20
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# EOF
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- name: show tables sizes and retrieve current backpressure seconds
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- name: show tables sizes after ingest
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run: |
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export LD_LIBRARY_PATH=${PG_16_LIB_PATH}
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${PSQL} "${NEW_PROJECT_CONNSTR}" -c "\dt+"
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BACKPRESSURE_TIME_AFTER_INGEST=$(${PSQL} "${NEW_PROJECT_CONNSTR}" -t -c "select backpressure_throttling_time()/1000000;")
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echo "BACKPRESSURE_TIME_AFTER_INGEST=${BACKPRESSURE_TIME_AFTER_INGEST}" >> $GITHUB_ENV
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- name: Parse pgcopydb log and report performance metrics
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env:
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PERF_TEST_RESULT_CONNSTR: ${{ secrets.PERF_TEST_RESULT_CONNSTR }}
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run: |
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export LD_LIBRARY_PATH=${PG_16_LIB_PATH}
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# Define the log file path
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LOG_FILE="/tmp/pgcopydb_${{ matrix.target_project }}.log"
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# Get the current git commit hash
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git config --global --add safe.directory /__w/neon/neon
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COMMIT_HASH=$(git rev-parse --short HEAD)
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# Define the platform and test suite
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PLATFORM="pg16-${{ matrix.target_project }}-us-east-2-staging"
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SUIT="pgcopydb_ingest_bench"
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# Function to convert time (e.g., "2h47m", "4h36m", "118ms", "8s493") to seconds
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convert_to_seconds() {
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local duration=$1
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local total_seconds=0
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# Check for hours (h)
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if [[ "$duration" =~ ([0-9]+)h ]]; then
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total_seconds=$((total_seconds + ${BASH_REMATCH[1]#0} * 3600))
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fi
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# Check for seconds (s)
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if [[ "$duration" =~ ([0-9]+)s ]]; then
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total_seconds=$((total_seconds + ${BASH_REMATCH[1]#0}))
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fi
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# Check for milliseconds (ms) (if applicable)
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if [[ "$duration" =~ ([0-9]+)ms ]]; then
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total_seconds=$((total_seconds + ${BASH_REMATCH[1]#0} / 1000))
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duration=${duration/${BASH_REMATCH[0]}/} # need to remove it to avoid double counting with m
|
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fi
|
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|
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# Check for minutes (m) - must be checked after ms because m is contained in ms
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if [[ "$duration" =~ ([0-9]+)m ]]; then
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total_seconds=$((total_seconds + ${BASH_REMATCH[1]#0} * 60))
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fi
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echo $total_seconds
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}
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|
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# Calculate the backpressure difference in seconds
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BACKPRESSURE_TIME_DIFF=$(awk "BEGIN {print $BACKPRESSURE_TIME_AFTER_INGEST - $BACKPRESSURE_TIME_BEFORE_INGEST}")
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# Insert the backpressure time difference into the performance database
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if [ -n "$BACKPRESSURE_TIME_DIFF" ]; then
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PSQL_CMD="${PSQL} \"${PERF_TEST_RESULT_CONNSTR}\" -c \"
|
||||
INSERT INTO public.perf_test_results (suit, revision, platform, metric_name, metric_value, metric_unit, metric_report_type, recorded_at_timestamp)
|
||||
VALUES ('${SUIT}', '${COMMIT_HASH}', '${PLATFORM}', 'backpressure_time', ${BACKPRESSURE_TIME_DIFF}, 'seconds', 'lower_is_better', now());
|
||||
\""
|
||||
echo "Inserting backpressure time difference: ${BACKPRESSURE_TIME_DIFF} seconds"
|
||||
eval $PSQL_CMD
|
||||
fi
|
||||
|
||||
# Extract and process log lines
|
||||
while IFS= read -r line; do
|
||||
METRIC_NAME=""
|
||||
# Match each desired line and extract the relevant information
|
||||
if [[ "$line" =~ COPY,\ INDEX,\ CONSTRAINTS,\ VACUUM.* ]]; then
|
||||
METRIC_NAME="COPY, INDEX, CONSTRAINTS, VACUUM (wall clock)"
|
||||
elif [[ "$line" =~ COPY\ \(cumulative\).* ]]; then
|
||||
METRIC_NAME="COPY (cumulative)"
|
||||
elif [[ "$line" =~ CREATE\ INDEX\ \(cumulative\).* ]]; then
|
||||
METRIC_NAME="CREATE INDEX (cumulative)"
|
||||
elif [[ "$line" =~ CONSTRAINTS\ \(cumulative\).* ]]; then
|
||||
METRIC_NAME="CONSTRAINTS (cumulative)"
|
||||
elif [[ "$line" =~ Finalize\ Schema.* ]]; then
|
||||
METRIC_NAME="Finalize Schema"
|
||||
elif [[ "$line" =~ Total\ Wall\ Clock\ Duration.* ]]; then
|
||||
METRIC_NAME="Total Wall Clock Duration"
|
||||
fi
|
||||
|
||||
# If a metric was matched, insert it into the performance database
|
||||
if [ -n "$METRIC_NAME" ]; then
|
||||
DURATION=$(echo "$line" | grep -oP '\d+h\d+m|\d+s|\d+ms|\d{1,2}h\d{1,2}m|\d+\.\d+s' | head -n 1)
|
||||
METRIC_VALUE=$(convert_to_seconds "$DURATION")
|
||||
PSQL_CMD="${PSQL} \"${PERF_TEST_RESULT_CONNSTR}\" -c \"
|
||||
INSERT INTO public.perf_test_results (suit, revision, platform, metric_name, metric_value, metric_unit, metric_report_type, recorded_at_timestamp)
|
||||
VALUES ('${SUIT}', '${COMMIT_HASH}', '${PLATFORM}', '${METRIC_NAME}', ${METRIC_VALUE}, 'seconds', 'lower_is_better', now());
|
||||
\""
|
||||
echo "Inserting ${METRIC_NAME} with value ${METRIC_VALUE} seconds"
|
||||
eval $PSQL_CMD
|
||||
fi
|
||||
done < "$LOG_FILE"
|
||||
${PSQL} "${BENCHMARK_INGEST_TARGET_CONNSTR}" -c "\dt+"
|
||||
|
||||
- name: Delete Neon Project
|
||||
if: ${{ always() && matrix.target_project == 'new_empty_project' }}
|
||||
|
||||
Reference in New Issue
Block a user