mirror of
https://github.com/neondatabase/neon.git
synced 2026-05-25 00:50:36 +00:00
R-Tree layer map (#2317)
Replace the layer array and linear search with R-tree So far, the in-memory layer map that holds information about layer files that exist, has used a simple Vec, in no particular order, to hold information about all the layers. That obviously doesn't scale very well; with thousands of layer files the linear search was consuming a lot of CPU. Replace it with a two-dimensional R-tree, with Key and LSN ranges as the dimensions. For the R-tree, use the 'rstar' crate. To be able to use that, we convert the Keys and LSNs into 256-bit integers. 64 bits would be enough to represent LSNs, and 128 bits would be enough to represent Keys. However, we use 256 bits, because rstar internally performs multiplication to calculate the area of rectangles, and the result of multiplying two 128 bit integers doesn't necessarily fit in 128 bits, causing integer overflow and, if overflow-checks are enabled, panic. To avoid that, we use 256 bit integers. Add a performance test that creates a lot of layer files, to demonstrate the benefit.
This commit is contained in:
committed by
GitHub
parent
e9a103c09f
commit
f3073a4db9
222
Cargo.lock
generated
222
Cargo.lock
generated
@@ -37,6 +37,12 @@ dependencies = [
|
||||
"memchr",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "amplify_num"
|
||||
version = "0.4.1"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "f27d3d00d3d115395a7a8a4dc045feb7aa82b641e485f7e15f4e67ac16f4f56d"
|
||||
|
||||
[[package]]
|
||||
name = "ansi_term"
|
||||
version = "0.12.1"
|
||||
@@ -135,6 +141,15 @@ dependencies = [
|
||||
"syn",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "atomic-polyfill"
|
||||
version = "0.1.10"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "9c041a8d9751a520ee19656232a18971f18946a7900f1520ee4400002244dd89"
|
||||
dependencies = [
|
||||
"critical-section",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "atty"
|
||||
version = "0.2.14"
|
||||
@@ -212,6 +227,21 @@ dependencies = [
|
||||
"rustc-demangle",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "bare-metal"
|
||||
version = "0.2.5"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "5deb64efa5bd81e31fcd1938615a6d98c82eafcbcd787162b6f63b91d6bac5b3"
|
||||
dependencies = [
|
||||
"rustc_version 0.2.3",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "bare-metal"
|
||||
version = "1.0.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "f8fe8f5a8a398345e52358e18ff07cc17a568fbca5c6f73873d3a62056309603"
|
||||
|
||||
[[package]]
|
||||
name = "base64"
|
||||
version = "0.13.0"
|
||||
@@ -250,6 +280,18 @@ dependencies = [
|
||||
"which",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "bit_field"
|
||||
version = "0.10.1"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "dcb6dd1c2376d2e096796e234a70e17e94cc2d5d54ff8ce42b28cef1d0d359a4"
|
||||
|
||||
[[package]]
|
||||
name = "bitfield"
|
||||
version = "0.13.2"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "46afbd2983a5d5a7bd740ccb198caf5b82f45c40c09c0eed36052d91cb92e719"
|
||||
|
||||
[[package]]
|
||||
name = "bitflags"
|
||||
version = "1.3.2"
|
||||
@@ -528,6 +570,18 @@ version = "0.8.3"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "5827cebf4670468b8772dd191856768aedcb1b0278a04f989f7766351917b9dc"
|
||||
|
||||
[[package]]
|
||||
name = "cortex-m"
|
||||
version = "0.7.6"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "70858629a458fdfd39f9675c4dc309411f2a3f83bede76988d81bf1a0ecee9e0"
|
||||
dependencies = [
|
||||
"bare-metal 0.2.5",
|
||||
"bitfield",
|
||||
"embedded-hal",
|
||||
"volatile-register",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "cpp_demangle"
|
||||
version = "0.3.5"
|
||||
@@ -552,7 +606,7 @@ version = "0.6.3"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "3dfea2db42e9927a3845fb268a10a72faed6d416065f77873f05e411457c363e"
|
||||
dependencies = [
|
||||
"rustc_version",
|
||||
"rustc_version 0.4.0",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
@@ -600,6 +654,18 @@ dependencies = [
|
||||
"itertools",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "critical-section"
|
||||
version = "0.2.7"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "95da181745b56d4bd339530ec393508910c909c784e8962d15d722bacf0bcbcd"
|
||||
dependencies = [
|
||||
"bare-metal 1.0.0",
|
||||
"cfg-if",
|
||||
"cortex-m",
|
||||
"riscv",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "crossbeam-channel"
|
||||
version = "0.5.6"
|
||||
@@ -844,6 +910,16 @@ version = "1.7.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "3f107b87b6afc2a64fd13cac55fe06d6c8859f12d4b14cbcdd2c67d0976781be"
|
||||
|
||||
[[package]]
|
||||
name = "embedded-hal"
|
||||
version = "0.2.7"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "35949884794ad573cf46071e41c9b60efb0cb311e3ca01f7af807af1debc66ff"
|
||||
dependencies = [
|
||||
"nb 0.1.3",
|
||||
"void",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "encoding_rs"
|
||||
version = "0.8.31"
|
||||
@@ -1165,6 +1241,15 @@ version = "1.8.2"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "eabb4a44450da02c90444cf74558da904edde8fb4e9035a9a6a4e15445af0bd7"
|
||||
|
||||
[[package]]
|
||||
name = "hash32"
|
||||
version = "0.2.1"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "b0c35f58762feb77d74ebe43bdbc3210f09be9fe6742234d573bacc26ed92b67"
|
||||
dependencies = [
|
||||
"byteorder",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "hashbrown"
|
||||
version = "0.12.3"
|
||||
@@ -1174,6 +1259,19 @@ dependencies = [
|
||||
"ahash",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "heapless"
|
||||
version = "0.7.16"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "db04bc24a18b9ea980628ecf00e6c0264f3c1426dac36c00cb49b6fbad8b0743"
|
||||
dependencies = [
|
||||
"atomic-polyfill",
|
||||
"hash32",
|
||||
"rustc_version 0.4.0",
|
||||
"spin 0.9.4",
|
||||
"stable_deref_trait",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "heck"
|
||||
version = "0.3.3"
|
||||
@@ -1491,6 +1589,12 @@ dependencies = [
|
||||
"winapi",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "libm"
|
||||
version = "0.2.5"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "292a948cd991e376cf75541fe5b97a1081d713c618b4f1b9500f8844e49eb565"
|
||||
|
||||
[[package]]
|
||||
name = "lock_api"
|
||||
version = "0.4.7"
|
||||
@@ -1649,6 +1753,21 @@ dependencies = [
|
||||
"tempfile",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "nb"
|
||||
version = "0.1.3"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "801d31da0513b6ec5214e9bf433a77966320625a37860f910be265be6e18d06f"
|
||||
dependencies = [
|
||||
"nb 1.0.0",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "nb"
|
||||
version = "1.0.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "546c37ac5d9e56f55e73b677106873d9d9f5190605e41a856503623648488cae"
|
||||
|
||||
[[package]]
|
||||
name = "nix"
|
||||
version = "0.23.1"
|
||||
@@ -1716,6 +1835,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "578ede34cf02f8924ab9447f50c28075b4d3e5b269972345e7e0372b38c6cdcd"
|
||||
dependencies = [
|
||||
"autocfg",
|
||||
"libm",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
@@ -1828,6 +1948,7 @@ checksum = "648001efe5d5c0102d8cea768e348da85d90af8ba91f0bea908f157951493cd4"
|
||||
name = "pageserver"
|
||||
version = "0.1.0"
|
||||
dependencies = [
|
||||
"amplify_num",
|
||||
"anyhow",
|
||||
"async-stream",
|
||||
"async-trait",
|
||||
@@ -1852,6 +1973,7 @@ dependencies = [
|
||||
"itertools",
|
||||
"metrics",
|
||||
"nix",
|
||||
"num-traits",
|
||||
"once_cell",
|
||||
"postgres",
|
||||
"postgres-protocol",
|
||||
@@ -1861,6 +1983,7 @@ dependencies = [
|
||||
"rand",
|
||||
"regex",
|
||||
"remote_storage",
|
||||
"rstar",
|
||||
"scopeguard",
|
||||
"serde",
|
||||
"serde_json",
|
||||
@@ -2515,12 +2638,33 @@ dependencies = [
|
||||
"cc",
|
||||
"libc",
|
||||
"once_cell",
|
||||
"spin",
|
||||
"spin 0.5.2",
|
||||
"untrusted",
|
||||
"web-sys",
|
||||
"winapi",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "riscv"
|
||||
version = "0.7.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "6907ccdd7a31012b70faf2af85cd9e5ba97657cc3987c4f13f8e4d2c2a088aba"
|
||||
dependencies = [
|
||||
"bare-metal 1.0.0",
|
||||
"bit_field",
|
||||
"riscv-target",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "riscv-target"
|
||||
version = "0.1.2"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "88aa938cda42a0cf62a20cfe8d139ff1af20c2e681212b5b34adb5a58333f222"
|
||||
dependencies = [
|
||||
"lazy_static",
|
||||
"regex",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "routerify"
|
||||
version = "3.0.0"
|
||||
@@ -2534,6 +2678,17 @@ dependencies = [
|
||||
"regex",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "rstar"
|
||||
version = "0.9.3"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "b40f1bfe5acdab44bc63e6699c28b74f75ec43afb59f3eda01e145aff86a25fa"
|
||||
dependencies = [
|
||||
"heapless",
|
||||
"num-traits",
|
||||
"smallvec",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "rstest"
|
||||
version = "0.12.0"
|
||||
@@ -2543,7 +2698,7 @@ dependencies = [
|
||||
"cfg-if",
|
||||
"proc-macro2",
|
||||
"quote",
|
||||
"rustc_version",
|
||||
"rustc_version 0.4.0",
|
||||
"syn",
|
||||
]
|
||||
|
||||
@@ -2565,7 +2720,7 @@ dependencies = [
|
||||
"log",
|
||||
"rusoto_credential",
|
||||
"rusoto_signature",
|
||||
"rustc_version",
|
||||
"rustc_version 0.4.0",
|
||||
"serde",
|
||||
"serde_json",
|
||||
"tokio",
|
||||
@@ -2623,7 +2778,7 @@ dependencies = [
|
||||
"percent-encoding",
|
||||
"pin-project-lite",
|
||||
"rusoto_credential",
|
||||
"rustc_version",
|
||||
"rustc_version 0.4.0",
|
||||
"serde",
|
||||
"sha2 0.9.9",
|
||||
"tokio",
|
||||
@@ -2641,13 +2796,22 @@ version = "1.1.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "08d43f7aa6b08d49f382cde6a7982047c3426db949b1424bc4b7ec9ae12c6ce2"
|
||||
|
||||
[[package]]
|
||||
name = "rustc_version"
|
||||
version = "0.2.3"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "138e3e0acb6c9fb258b19b67cb8abd63c00679d2851805ea151465464fe9030a"
|
||||
dependencies = [
|
||||
"semver 0.9.0",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "rustc_version"
|
||||
version = "0.4.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "bfa0f585226d2e68097d4f95d113b15b83a82e819ab25717ec0590d9584ef366"
|
||||
dependencies = [
|
||||
"semver",
|
||||
"semver 1.0.13",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
@@ -2800,12 +2964,27 @@ dependencies = [
|
||||
"libc",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "semver"
|
||||
version = "0.9.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "1d7eb9ef2c18661902cc47e535f9bc51b78acd254da71d375c2f6720d9a40403"
|
||||
dependencies = [
|
||||
"semver-parser",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "semver"
|
||||
version = "1.0.13"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "93f6841e709003d68bb2deee8c343572bf446003ec20a583e76f7b15cebf3711"
|
||||
|
||||
[[package]]
|
||||
name = "semver-parser"
|
||||
version = "0.7.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "388a1df253eca08550bef6c72392cfe7c30914bf41df5269b68cbd6ff8f570a3"
|
||||
|
||||
[[package]]
|
||||
name = "serde"
|
||||
version = "1.0.142"
|
||||
@@ -2999,6 +3178,15 @@ version = "0.5.2"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "6e63cff320ae2c57904679ba7cb63280a3dc4613885beafb148ee7bf9aa9042d"
|
||||
|
||||
[[package]]
|
||||
name = "spin"
|
||||
version = "0.9.4"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "7f6002a767bff9e83f8eeecf883ecb8011875a21ae8da43bffb817a57e78cc09"
|
||||
dependencies = [
|
||||
"lock_api",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "stable_deref_trait"
|
||||
version = "1.2.0"
|
||||
@@ -3675,6 +3863,12 @@ version = "0.1.0"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "830b7e5d4d90034032940e4ace0d9a9a057e7a45cd94e6c007832e39edb82f6d"
|
||||
|
||||
[[package]]
|
||||
name = "vcell"
|
||||
version = "0.1.3"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "77439c1b53d2303b20d9459b1ade71a83c716e3f9c34f3228c00e6f185d6c002"
|
||||
|
||||
[[package]]
|
||||
name = "vcpkg"
|
||||
version = "0.2.15"
|
||||
@@ -3687,6 +3881,21 @@ version = "0.9.4"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "49874b5167b65d7193b8aba1567f5c7d93d001cafc34600cee003eda787e483f"
|
||||
|
||||
[[package]]
|
||||
name = "void"
|
||||
version = "1.0.2"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "6a02e4885ed3bc0f2de90ea6dd45ebcbb66dacffe03547fadbb0eeae2770887d"
|
||||
|
||||
[[package]]
|
||||
name = "volatile-register"
|
||||
version = "0.2.1"
|
||||
source = "registry+https://github.com/rust-lang/crates.io-index"
|
||||
checksum = "9ee8f19f9d74293faf70901bc20ad067dc1ad390d2cbf1e3f75f721ffee908b6"
|
||||
dependencies = [
|
||||
"vcell",
|
||||
]
|
||||
|
||||
[[package]]
|
||||
name = "wal_craft"
|
||||
version = "0.1.0"
|
||||
@@ -3952,6 +4161,7 @@ dependencies = [
|
||||
"regex-syntax",
|
||||
"scopeguard",
|
||||
"serde",
|
||||
"stable_deref_trait",
|
||||
"syn",
|
||||
"time 0.3.12",
|
||||
"tokio",
|
||||
|
||||
Reference in New Issue
Block a user