## Problem
`test_scrubber_tenant_snapshot` is flaky with `request was dropped`
errors. More details are in the issue.
- Closes: https://github.com/neondatabase/neon/issues/11278
## Summary of changes
- Disable shard scheduling during pageservers restart
- Add `reconcile_until_idle` in the end of the test
## Problem
`TYPE_CHECKING` is used inconsistently across Python tests.
## Summary of changes
- Update `ruff`: 0.7.0 -> 0.11.2
- Enable TC (flake8-type-checking):
https://docs.astral.sh/ruff/rules/#flake8-type-checking-tc
- (auto)fix all new issues
## Problem
In #10752 I used an overly-strict regex that only ignored error on a
particular key.
## Summary of changes
- Drop key from regex so it matches all such errors
## Problem
Previously, Workload was reconfiguring the compute before each run of
writes, which was meant to be a no-op when nothing changed, but was
actually writing extra data due to an issue being fixed in
https://github.com/neondatabase/neon/pull/10696.
The row counts in tests were too low in some cases, these tests were
only working because of those extra writes that shouldn't have been
happening, and moreover were relying on checkpoints happening.
## Summary of changes
- Only reconfigure compute if the attached pageserver actually changed.
If pageserver is set to None, that means controller is managing
everything, so never reconfigure compute.
- Update tests that wrote too few rows.
---------
Co-authored-by: Alexey Kondratov <kondratov.aleksey@gmail.com>
## Problem
These tests can encounter a bug in the pageserver read path (#9185)
which occurs under the very specific circumstances that the tests
create, but is very unlikely to happen in the field.
We will fix the bug, but in the meantime let's un-flake the tests.
Related: https://github.com/neondatabase/neon/issues/10720
## Summary of changes
- Permit "could not find data for key" errors in tests affected by #9185
## Problem
This test would sometimes emit unexpected logs from the storage
controller's requests to do migrations, which overlap with the test's
restarts of pageservers, where those migrations are happening some time
after a shard split as the controller moves load around.
Example:
https://neon-github-public-dev.s3.amazonaws.com/reports/pr-10602/13067323736/index.html#testresult/f66f1329557a1fc5/retries
## Summary of changes
- Do a reconcile_until_idle after shard split, so that the rest of the
test doesn't run concurrently with migrations
## Problem
test_scrubber_tenant_snapshot restarts pageservers, but log validation
fails tests on any non white listed storcon warnings, making the test
flaky.
## Summary of changes
Allow warns like
2025-01-29T12:37:42.622179Z WARN reconciler{seq=1
tenant_id=2011077aea9b4e8a60e8e8a19407634c shard_id=0004}: Call to node
2 (localhost:15352) management API failed, will retry (attempt 1):
receive body: error sending request for url
(http://localhost:15352/v1/tenant/2011077aea9b4e8a60e8e8a19407634c-0004/location_config):
client error (Connect)
ref https://github.com/neondatabase/neon/issues/10462
## Problem
PR #10457 was supposed to fix the flakiness of
`test_scrubber_physical_gc_ancestors`, but instead it made it even more
flaky. However, the original error causes disappeared, now to be
replaced by key not found errors.
See this for a longer explanation:
https://github.com/neondatabase/neon/issues/10391#issuecomment-2608018967
## Solution
This does one churn rows after all compactions, and before we do any
timeline gc's. That way, we remain more accessible at older lsn's.
We currently have some flakiness in
`test_scrubber_physical_gc_ancestors`, see #10391.
The first flakiness kind is about the reconciler not actually becoming
idle within the timeout of 30 seconds. We see continuous forward
progress so this is likely not a hang. We also see this happen in
parallel to a test failure, so is likely due to runners being
overloaded. Therefore, we increase the timeout.
The second flakiness kind is an assertion failure. This one is a little
bit more tricky, but we saw in the successful run that there was some
advance of the lsn between the compaction ran (which created layer
files) and the gc run. Apparently gc rejects reductions to the single
image layer setting if the cutoff lsn is the same as the lsn of the
image layer: it will claim that that layer is newer than the space
cutoff and therefore skip it, while thinking the old layer (that we want
to delete) is the latest one (so it's not deleted).
We address the second flakiness kind by inserting a tiny amount of WAL
between the compaction and gc. This should hopefully fix things.
Related issue: #10391
(not closing it with the merger of the PR as we'll need to validate that
these changes had the intended effect).
Thanks to Chi for going over this together with me in a call.
## Problem
We see periodic failures in `test_scrubber_physical_gc_ancestors`, where
the logs show that the pageserver is creating image layers that should
cause child shards to no longer reference their parents' layers, but
then the scrubber runs and doesn't find any unreferenced layers.[
https://neon-github-public-dev.s3.amazonaws.com/reports/pr-10256/12582034135/index.html#/testresult/78ea06dea6ba8dd3
From inspecting the code & test, it seems like this could be as simple
as the test failing to wait for uploads before running the scrubber. It
had a 2 second delay built in to satisfy the scrubbers time threshold
checks, which on a lightly loaded machine would also have been easily
enough for uploads to complete, but our test machines are more heavily
loaded all the time.
## Summary of changes
- Wait for uploads to complete after generating images layers in
test_scrubber_physical_gc_ancestors, so that the scrubber should
reliably see the post-compaction metadata.
## Problem
resolve
https://github.com/neondatabase/neon/issues/9988#issuecomment-2528239437
## Summary of changes
* New verbose mode for storage scrubber scan metadata (pageserver) that
contains the error messages.
* Filter allowed_error list from the JSON output to determine the
healthy flag status.
---------
Signed-off-by: Alex Chi Z <chi@neon.tech>
Improves `wait_until` by:
* Use `timeout` instead of `iterations`. This allows changing the
timeout/interval parameters independently.
* Make `timeout` and `interval` optional (default 20s and 0.5s). Most
callers don't care.
* Only output status every 1s by default, and add optional
`status_interval` parameter.
* Remove `show_intermediate_error`, this was always emitted anyway.
Most callers have been updated to use the defaults, except where they
had good reason otherwise.
## Problem
On Debian 12 (Bookworm), Python 3.11 is the latest available version.
## Summary of changes
- Update Python to 3.11 in build-tools
- Fix ruff check / format
- Fix mypy
- Use `StrEnum` instead of pair `str`, `Enum`
- Update docs
Add wrappers for a few commands that didn't have them before. Move the
logic to generate tenant and timeline IDs from NeonCli to the callers,
so that NeonCli is more purely just a type-safe wrapper around
'neon_local'.
Part of #7497, closes https://github.com/neondatabase/neon/issues/8890.
## Problem
Since leases are in-memory objects, we need to take special care of them
after pageserver restarts and while doing a live migration. The approach
we took for pageserver restart is to wait for at least lease duration
before doing first GC. We want to do the same for live migration. Since
we do not do any GC when a tenant is in `AttachedStale` or
`AttachedMulti` mode, only the transition from `AttachedMulti` to
`AttachedSingle` requires this treatment.
## Summary of changes
- Added `lsn_lease_deadline` field in `GcBlock::reasons`: the tenant is
temporarily blocked from GC until we reach the deadline. This
information does not persist to S3.
- In `GCBlock::start`, skip the GC iteration if we are blocked by the
lsn lease deadline.
- In `TenantManager::upsert_location`, set the lsn_lease_deadline to
`Instant::now() + lsn_lease_length` so the granted leases have a chance
to be renewed before we run GC for the first time after transitioned
from AttachedMulti to AttachedSingle.
Signed-off-by: Yuchen Liang <yuchen@neon.tech>
Co-authored-by: Joonas Koivunen <joonas@neon.tech>
## Problem
The initial implementation of the validate API treats the in-memory
generations as authoritative.
- This is true when only one storage controller is running, but if a
rogue controller was running that hadn't been shut down properly, and
some pageserver requests were routed to that bad controller, it could
incorrectly return valid=true for stale generations.
- The generation in the main in-memory map gets out of date while a live
migration is in flight, and if the origin location for the migration
tries to do some deletions even though it is in AttachedStale (for
example because it had already started compaction), these might be
wrongly validated + executed.
## Summary of changes
- Continue to do the in-memory check: if this returns valid=false it is
sufficient to reject requests.
- When valid=true, do an additional read from the database to confirm
the generation is fresh.
- Revise behavior for validation on missing shards: this used to always
return valid=true as a convenience for deletions and shard splits, so
that pageservers weren't prevented from completing any enqueued
deletions for these shards after they're gone. However, this becomes
unsafe when we consider split brain scenarios. We could reinstate this
in future if we wanted to store some tombstones for deleted shards.
- Update test_scrubber_physical_gc to cope with the behavioral change:
they must now explicitly flush the deletion queue before splits, to
avoid tripping up on deletions that are enqueued at the time of the
split (these tests assert "scrubber deletes nothing", which check fails
if the split leaves behind some remote objects that are legitimately
GC'able)
- Add `test_storage_controller_validate_during_migration`, which uses
failpoints to create a situation where incorrect generation validation
during a live migration could result in a corruption
The rate of validate calls for tenants is pretty low: it happens as a
consequence deletions from GC and compaction, which are both
concurrency-limited on the pageserver side.
This copies a piece of code from `test_scrubber_physical_gc_ancestors`
to fix a source of flakiness: later on we rely on stuff being older than
a second, but the test can run faster under optimal conditions (as
happened to me locally, but also obvservable in
[this](https://neon-github-public-dev.s3.amazonaws.com/reports/main/10470762360/index.html#testresult/f713b02657db4b4c/retries)
allure report):
```
test_runner/regress/test_storage_scrubber.py:169: in test_scrubber_physical_gc
assert gc_summary["remote_storage_errors"] == 0
E assert 1 == 0
```
## Problem
The storage scrubber was reporting warnings for lots of timelines like:
```
WARN Missed some shards at count ShardCount(0) tenant_id=25eb7a83d9a2f90ac0b765b6ca84cf4c
```
These were spurious: these tenants are fine. There was a bug in
accumulating the ShardIndex for each tenant, whereby multiple timelines
would lead us to add the same ShardIndex more than one.
Closes: #8646
## Summary of changes
- Accumulate ShardIndex in a BTreeSet instead of a Vec
- Extend the test to reproduce the issue
Part of #8128.
## Problem
Currently, scrubber `scan_metadata` command will return with an error
code if the metadata on remote storage is corrupted with fatal errors.
To safely deploy this command in a cronjob, we want to differentiate
between failures while running scrubber command and the erroneous
metadata. At the same time, we also want our regression tests to catch
corrupted metadata using the scrubber command.
## Summary of changes
- Return with error code only when the scrubber command fails
- Uses explicit checks on errors and warnings to determine metadata
health in regression tests.
**Resolve conflict with `tenant-snapshot` command (after shard split):**
[`test_scrubber_tenant_snapshot`](https://github.com/neondatabase/neon/blob/yuchen/scrubber-scan-cleanup-before-prod/test_runner/regress/test_storage_scrubber.py#L23)
failed before applying 422a8443dd
- When taking a snapshot, the old `index_part.json` in the unsharded
tenant directory is not kept.
- The current `list_timeline_blobs` implementation consider no
`index_part.json` as a parse error.
- During the scan, we are only analyzing shards with highest shard
count, so we will not get a parse error. but we do need to add the
layers to tenant object listing, otherwise we will get index is
referencing a layer that is not in remote storage error.
- **Action:** Add s3_layers from `list_timeline_blobs` regardless of
parsing error
Signed-off-by: Yuchen Liang <yuchen@neon.tech>
## Problem
Previously, when we do a timeline deletion, shards will delete layers
that belong to an ancestor. That is not a correctness issue, because
when we delete a timeline, we're always deleting it from all shards, and
destroying data for that timeline is clearly fine.
However, there exists a race where one shard might start doing this
deletion while another shard has not yet received the deletion request,
and might try to access an ancestral layer. This creates ambiguity over
the "all layers referenced by my index should always exist" invariant,
which is important to detecting and reporting corruption.
Now that we have a GC mode for clearing up ancestral layers, we can rely
on that to clean up such layers, and avoid deleting them right away.
This makes things easier to reason about: there are now no cases where a
shard will delete a layer that belongs to a ShardIndex other than
itself.
## Summary of changes
- Modify behavior of RemoteTimelineClient::delete_all
- Add `test_scrubber_physical_gc_timeline_deletion` to exercise this
case
- Tweak AWS SDK config in the scrubber to enable retries. Motivated by
seeing the test for this feature encounter some transient "service
error" S3 errors (which are probably nothing to do with the changes in
this PR)
Part of #8128, followup to #8480. closes#8421.
Enable scrubber to optionally post metadata scan health results to
storage controller.
Signed-off-by: Yuchen Liang <yuchen@neon.tech>
## Problem
This test relies on writing image layers before the split. It can fail
to do so durably if the image layers are written ahead of the remote
consistent LSN, so we should have been doing a checkpoint rather than
just a compaction
## Problem
This test sometimes found that ancestors were getting cleaned up before
it had done any compaction.
Compaction was happening implicitly via Workload.
Example:
https://neon-github-public-dev.s3.amazonaws.com/reports/pr-8298/10032173390/index.html#testresult/fb04786402f80822/retries
## Summary of changes
- Set upload=False when writing data after shard split, to avoid doing a
checkpoint
- Add a checkpoint_period & explicit wait for uploads so that we ensure
data lands in S3 without doing a checkpoint
Part of #8128.
## Problem
Scrubber uses `scan_metadata` command to flag metadata inconsistencies.
To trust it at scale, we need to make sure the errors we emit is a
reflection of real scenario. One check performed in the scrubber is to
see whether layers listed in the latest `index_part.json` is present in
object listing. Currently, the scrubber does not robustly handle the
case where objects are uploaded/deleted during the scan.
## Summary of changes
**Condition for success:** An object in the index is (1) in the object
listing we acquire from S3 or (2) found in a HeadObject request (new
object).
- Add in the `HeadObject` requests for the layers missing from the
object listing.
- Keep the order of first getting the object listing and then
downloading the layers.
- Update check to only consider shards with highest shard count.
- Skip analyzing a timeline if `deleted_at` tombstone is marked in
`index_part.json`.
- Add new test to see if scrubber actually detect the metadata
inconsistency.
_Misc_
- A timeline with no ancestor should always have some layers.
- Removed experimental histograms
_Caveat_
- Ancestor layer is not cleaned until #8308 is implemented. If ancestor
layers reference non-existing layers in the index, the scrubber will
emit false positives.
Signed-off-by: Yuchen Liang <yuchen@neon.tech>
## Problem
After a shard split, the pageserver leaves the ancestor shard's content
in place. It may be referenced by child shards, but eventually child
shards will de-reference most ancestor layers as they write their own
data and do GC. We would like to eventually clean up those ancestor
layers to reclaim space.
## Summary of changes
- Extend the physical GC command with `--mode=full`, which includes
cleaning up unreferenced ancestor shard layers
- Add test `test_scrubber_physical_gc_ancestors`
- Remove colored log output: in testing this is irritating ANSI code
spam in logs, and in interactive use doesn't add much.
- Refactor storage controller API client code out of storcon_client into
a `storage_controller/client` crate
- During physical GC of ancestors, call into the storage controller to
check that the latest shards seen in S3 reflect the latest state of the
tenant, and there is no shard split in progress.
The S3 scrubber contains "S3" in its name, but we want to make it
generic in terms of which storage is used (#7547). Therefore, rename it
to "storage scrubber", following the naming scheme of already existing
components "storage broker" and "storage controller".
Part of #7547
