Commit Graph

999 Commits

Author SHA1 Message Date
Christian Schwarz
7721f1b9c6 work_queue: detect exception raise in work_fn 2024-01-09 15:04:46 +00:00
Christian Schwarz
af270a2ba0 more progress logging 2024-01-09 09:47:12 +00:00
Christian Schwarz
5f4fe8f72a fight various timeouts at high tenant count 2024-01-09 09:45:37 +00:00
Christian Schwarz
52e1d5605f work_queue abstraction: typing fixes 2024-01-08 18:29:29 +00:00
Christian Schwarz
587493dbe1 many_tenants: logging 2024-01-08 17:25:19 +00:00
Christian Schwarz
d9586e27fd Merge remote-tracking branch 'origin/main' into problame/benchmarking/pr/python-perftest 2024-01-08 14:24:32 +00:00
John Spray
b3a681d121 s3_scrubber: updates for sharding (#6281)
This is a lightweight change to keep the scrubber providing sensible
output when using sharding.

- The timeline count was wrong when using sharding
- When checking for tenant existence, we didn't re-use results between
different shards in the same tenant

Closes: https://github.com/neondatabase/neon/issues/5929
2024-01-08 09:19:10 +00:00
Christian Schwarz
fbcb1268bf extract work queue and use it to drive broken attach in parallel 2024-01-05 19:10:41 +00:00
Christian Schwarz
392e014a7f reuable abstraction for many tenants fixture 2024-01-05 18:08:59 +00:00
Christian Schwarz
dd69927953 do the on-demand downloads in Python, it's faster; plus some cleanups and renamings 2024-01-05 17:37:59 +00:00
Alexander Bayandin
7de829e475 test_runner: replace black with ruff format (#6268)
## Problem

`black` is slow sometimes, we can replace it with `ruff format` (a new
feature in 0.1.2 [0]), which produces pretty similar to black style [1].

On my local machine (MacBook M1 Pro 16GB):
```
# `black` on main
$ hyperfine "BLACK_CACHE_DIR=/dev/null poetry run black ."
Benchmark 1: BLACK_CACHE_DIR=/dev/null poetry run black .
  Time (mean ± σ):      3.131 s ±  0.090 s    [User: 5.194 s, System: 0.859 s]
  Range (min … max):    3.047 s …  3.354 s    10 runs
```
```
# `ruff format` on the current PR
$ hyperfine "RUFF_NO_CACHE=true poetry run ruff format"      
Benchmark 1: RUFF_NO_CACHE=true poetry run ruff format
  Time (mean ± σ):     300.7 ms ±  50.2 ms    [User: 259.5 ms, System: 76.1 ms]
  Range (min … max):   267.5 ms … 420.2 ms    10 runs
```

## Summary of changes
- Replace `black` with `ruff format` everywhere

- [0] https://docs.astral.sh/ruff/formatter/
- [1] https://docs.astral.sh/ruff/formatter/#black-compatibility
2024-01-05 15:35:07 +00:00
Christian Schwarz
838a6d304d test_snapshot_dir fixture with marker file for finished snapshot 2024-01-05 13:41:12 +00:00
Christian Schwarz
72da46dd5a improve overlayfs cleanup code 2024-01-05 13:17:28 +00:00
John Spray
3c560d27a8 pageserver: implement secondary-mode downloads (#6123)
Follows on from #6050 , in which we upload heatmaps. Secondary locations
will now poll those heatmaps and download layers mentioned in the
heatmap.

TODO:
- [X] ~Unify/reconcile stats for behind-schedule execution with
warn_when_period_overrun
(https://github.com/neondatabase/neon/pull/6050#discussion_r1426560695)~
- [x] Give downloads their own concurrency config independent of uploads

Deferred optimizations:
- https://github.com/neondatabase/neon/issues/6199
- https://github.com/neondatabase/neon/issues/6200

Eviction will be the next PR:
- #5342
2024-01-05 12:29:20 +00:00
Christian Schwarz
a748d67915 add support to use overlayfs in from_root_dir 2024-01-05 12:15:32 +00:00
Christian Schwarz
857eabc812 include downloaded layers in snapshot 2024-01-05 10:57:14 +00:00
Arthur Petukhovsky
f3b5db1443 Add API for safekeeper timeline copy (#6091)
Implement API for cloning a single timeline inside a safekeeper. Also
add API for calculating a sha256 hash of WAL, which is used in tests.

`/copy` API works by copying objects inside S3 for all but the last
segments, and the last segments are copied on-disk. A special temporary
directory is created for a timeline, because copy can take a lot of
time, especially for large timelines. After all files segments have been
prepared, this directory is mounted to the main tree and timeline is
loaded to memory.

Some caveats:
- large timelines can take a lot of time to copy, because we need to
copy many S3 segments
- caller should wait for HTTP call to finish indefinetely and don't
close the HTTP connection, because it will stop the process, which is
not continued in the background
- `until_lsn` must be a valid LSN, otherwise bad things can happen
- API will return 200 if specified `timeline_id` already exists, even if
it's not a copy
- each safekeeper will try to copy S3 segments, so it's better to not
call this API in-parallel on different safekeepers
2024-01-04 17:40:38 +00:00
Alexander Bayandin
be21ab135d Revert "test_pageserver: fix unexpected message: CopyFail during COPY by turning off safekeepers"
This reverts commit e91073df75.
2024-01-03 19:13:02 +00:00
Alexander Bayandin
c54b262bbe test_pageserver: start all components from snapshot 2024-01-03 19:12:38 +00:00
Alexander Bayandin
e91073df75 test_pageserver: fix unexpected message: CopyFail during COPY by turning off safekeepers 2024-01-03 17:06:21 +00:00
Alexander Bayandin
7322ccf3f7 test_pageserver: move attachment to different section 2024-01-03 17:04:47 +00:00
Alexander Bayandin
004aff5314 test_pageserver: report duration 2024-01-03 16:51:45 +00:00
John Spray
edc962f1d7 test_runner: test_issue_5878 log allow list (#6259)
## Problem


https://neon-github-public-dev.s3.amazonaws.com/reports/pr-6254/7388706419/index.html#suites/5a4b8734277a9878cb429b80c314f470/e54c4f6f6ed22672

## Summary of changes

Permit the log message: because the test helper's detach function
increments the generation number, a detach/attach cycle can cause the
error if the test runner node is slow enough for the opportunistic
deletion queue flush on detach not to complete by the time we call
attach.
2024-01-03 14:22:17 +00:00
Arseny Sher
65b4e6e7d6 Remove empty safekeeper init since truncateLsn.
It has caveats such as creating half empty segment which can't be
offloaded. Instead we'll pursue approach of pull_timeline, seeding new state
from some peer.
2024-01-03 18:20:19 +04:00
Alexander Bayandin
549f607a13 Merge remote-tracking branch 'origin/main' into problame/benchmarking/pr/python-perftest 2024-01-03 13:30:49 +00:00
John Spray
673a865055 tests: tolerate 304 when evicting layers (#6261)
In tests that evict layers, explicit eviction can race with automatic
eviction of the same layer and result in a 304
2024-01-03 11:50:58 +00:00
Arseny Sher
aaaa39d9f5 Add large insertion and slow WAL sending to test_hot_standby.
To exercise MAX_SEND_SIZE sending from safekeeper; we've had a bug with WAL
records torn across several XLogData messages. Add failpoint to safekeeper to
slow down sending. Also check for corrupted WAL complains in standby log.

Make the test a bit simpler in passing, e.g. we don't need explicit commits as
autocommit is enabled by default.

https://neondb.slack.com/archives/C05L7D1JAUS/p1703774799114719
https://github.com/neondatabase/cloud/issues/9057
2024-01-02 10:50:20 +04:00
Arseny Sher
e79a19339c Add failpoint support to safekeeper.
Just a copy paste from pageserver.
2024-01-02 10:50:20 +04:00
Arseny Sher
90ef48aab8 Fix safekeeper START_REPLICATION (term=n).
It was giving WAL only up to commit_lsn instead of flush_lsn, so recovery of
uncommitted WAL since cdb08f03 hanged. Add test for this.
2024-01-01 20:44:05 +04:00
Arseny Sher
d5fbfe2399 Remove test_wal_deleted_after_broadcast.
It is superseded by stronger test_lagging_sk.
2023-12-26 14:12:53 +04:00
Arseny Sher
df760e6de5 Add test_lagging_sk. 2023-12-26 14:12:53 +04:00
John Spray
e68ae2888a pageserver: expedite tenant activation on delete (#6190)
## Problem

During startup, a tenant delete request might have to retry for many
minutes waiting for a tenant to enter Active state.

## Summary of changes

- Refactor delete_tenant into TenantManager: this is not a functional
change, but will avoid merge conflicts with
https://github.com/neondatabase/neon/pull/6105 later
- Add 412 responses to the swagger definition of this endpoint.
- Use Tenant::wait_to_become_active in `TenantManager::delete_tenant`

---------

Co-authored-by: Arpad Müller <arpad-m@users.noreply.github.com>
2023-12-22 10:22:22 +00:00
Bodobolero
f93d15f781 add comment to run vacuum for clickbench (#6212)
## Problem

This is a comment only change.
To ensure that our benchmarking results are fair we need to have correct
stats in catalog. Otherwise optimizer chooses seq scan instead of index
only scan for some queries. Added comment to run vacuum after data prep.
2023-12-21 13:34:31 +01:00
Alexander Bayandin
1a8a46bab4 test_pageserver: make compatible with the latest code 2023-12-21 12:29:29 +00:00
Alexander Bayandin
79917e1889 test_pageserver: add snapshotting_env fixture 2023-12-21 12:29:29 +00:00
Alexander Bayandin
69ec51d3c4 Add NeonBenchmarker#record_pagebench_results method 2023-12-21 12:29:29 +00:00
Christian Schwarz
8d4fc911c1 WIP: performance test that uses the getpage benchmark 2023-12-21 12:29:29 +00:00
Joonas Koivunen
48f156b8a2 feat: relative last activity based eviction (#6136)
Adds a new disk usage based eviction option, EvictionOrder, which
selects whether to use the current `AbsoluteAccessed` or this new
proposed but not yet tested `RelativeAccessed`. Additionally a fudge
factor was noticed while implementing this, which might help sparing
smaller tenants at the expense of targeting larger tenants.

Cc: #5304

Co-authored-by: Arpad Müller <arpad@neon.tech>
2023-12-20 18:44:19 +00:00
John Spray
ac38d3a88c remote_storage: don't count 404s as errors (#6201)
## Problem

Currently a chart of S3 error rate is misleading: it can show errors any
time we are attaching a tenant (probing for index_part generation,
checking for remote delete marker).

Considering 404 successful isn't perfectly elegant, but it enables the
error rate to be used a a more meaningful alert signal: it would
indicate if we were having auth issues, sending bad requests, getting
throttled ,etc.

## Summary of changes

Track 404 requests in the AttemptOutcome::Ok bucket instead of the
AttemptOutcome::Err bucket.
2023-12-20 17:00:29 +00:00
John Spray
f260f1565e pageserver: fixes + test updates for sharding (#6186)
This is a precursor to:
- https://github.com/neondatabase/neon/pull/6185

While that PR contains big changes to neon_local and attachment_service,
this PR contains a few unrelated standalone changes generated while
working on that branch:
- Fix restarting a pageserver when it contains multiple shards for the
same tenant
- When using location_config api to attach a tenant, create its
timelines dir
- Update test paths where generations were previously optional to make
them always-on: this avoids tests having to spuriously assert that
attachment_service is not None in order to make the linter happy.
- Add a TenantShardId python implementation for subsequent use in test
helpers that will be made shard-aware
- Teach scrubber to read across shards when checking for layer
existence: this is a refactor to track the list of existent layers at
tenant-level rather than locally to each timeline. This is a precursor
to testing shard splitting.
2023-12-20 12:26:20 +00:00
Bodobolero
73d247c464 Analyze clickbench performance with explain plans and pg_stat_statements (#6161)
## Problem

To understand differences in performance between neon, aurora and rds we
want to collect explain analyze plans and pg_stat_statements for
selected benchmarking runs

## Summary of changes

Add workflow input options to collect explain and pg_stat_statements for
benchmarking workflow

Co-authored-by: BodoBolero <bodobolero@gmail.com>
2023-12-19 11:44:25 +00:00
Arpad Müller
a89d6dc76e Always send a json response for timeline_get_lsn_by_timestamp (#6178)
As part of the transition laid out in
[this](https://github.com/neondatabase/cloud/pull/7553#discussion_r1370473911)
comment, don't read the `version` query parameter in
`timeline_get_lsn_by_timestamp`, but always return the structured json
response.

Follow-up of https://github.com/neondatabase/neon/pull/5608
2023-12-19 11:29:16 +01:00
John Khvatov
33cb9a68f7 pageserver: Reduce tracing overhead in timeline::get (#6115)
## Problem

Compaction process (specifically the image layer reconstructions part)
is lagging behind wal ingest (at speed ~10-15MB/s) for medium-sized
tenants (30-50GB). CPU profile shows that significant amount of time
(see flamegraph) is being spent in `tracing::span::Span::new`.

mainline (commit: 0ba4cae491):

![reconstruct-mainline-0ba4cae491c2](https://github.com/neondatabase/neon/assets/289788/ebfd262e-5c97-4858-80c7-664a1dbcc59d)

## Summary of changes

By lowering the tracing level in get_value_reconstruct_data and
get_or_maybe_download from info to debug, we can reduce the overhead of
span creation in prod environments. On my system, this sped up the image
reconstruction process by 60% (from 14500 to 23160 page reconstruction
per sec)

pr:

![reconstruct-opt-2](https://github.com/neondatabase/neon/assets/289788/563a159b-8f2f-4300-b0a1-6cd66e7df769)


`create_image_layers()` (it's 1 CPU bound here) mainline vs pr:

![image](https://github.com/neondatabase/neon/assets/289788/a981e3cb-6df9-4882-8a94-95e99c35aa83)
2023-12-18 13:33:23 +00:00
John Spray
d066dad84b pageserver: prioritize activation of tenants with client requests (#6112)
## Problem

During startup, a client request might have to wait a long time while
the system is busy initializing all the attached tenants, even though
most of the attached tenants probably don't have any client requests to
service, and could wait a bit.

## Summary of changes

- Add a semaphore to limit how many Tenant::spawn()s may concurrently do
I/O to attach their tenant (i.e. read indices from remote storage, scan
local layer files, etc).
- Add Tenant::activate_now, a hook for kicking a tenant in its spawn()
method to skip waiting for the warmup semaphore
- For tenants that attached via warmup semaphore units, wait for logical
size calculation to complete before dropping the warmup units
- Set Tenant::activate_now in `get_active_tenant_with_timeout` (the page
service's path for getting a reference to a tenant).
- Wait for tenant activation in HTTP handlers for timeline creation and
deletion: like page service requests, these require an active tenant and
should prioritize activation if called.
2023-12-15 20:37:47 +00:00
John Spray
56f7d55ba7 pageserver: basic cancel/timeout for remote storage operations (#6097)
## Problem

Various places in remote storage were not subject to a timeout (thereby
stuck TCP connections could hold things up), and did not respect a
cancellation token (so things like timeline deletion or tenant detach
would have to wait arbitrarily long).



## Summary of changes

- Add download_cancellable and upload_cancellable helpers, and use them
in all the places we wait for remote storage operations (with the
exception of initdb downloads, where it would not have been safe).
- Add a cancellation token arg to `download_retry`.
- Use cancellation token args in various places that were missing one
per #5066

Closes: #5066 

Why is this only "basic" handling?
- Doesn't express difference between shutdown and errors in return
types, to avoid refactoring all the places that use an anyhow::Error
(these should all eventually return a more structured error type)
- Implements timeouts on top of remote storage, rather than within it:
this means that operations hitting their timeout will lose their
semaphore permit and thereby go to the back of the queue for their
retry.
- Doing a nicer job is tracked in
https://github.com/neondatabase/neon/issues/6096
2023-12-15 17:43:02 +00:00
John Spray
bd1cb1b217 tests: update allow list for negative_env (#6144)
Tests attaching the tenant immediately after the fixture detaches it
could result in LSN updates failing validation

e.g.
https://neon-github-public-dev.s3.amazonaws.com/reports/pr-6142/7211196140/index.html#suites/7745dadbd815ab87f5798aa881796f47/32b12ccc0b01b122
2023-12-15 15:08:28 +00:00
Arseny Sher
5bb9ba37cc Fix python list_segments of sk.
Fixes rare test_peer_recovery flakiness as we started to compare tmp control
file.

https://neondb.slack.com/archives/C04KGFVUWUQ/p1702310929657179
2023-12-15 13:43:11 +04:00
John Spray
f1cd1a2122 pageserver: improved handling of concurrent timeline creations on the same ID (#6139)
## Problem

Historically, the pageserver used an "uninit mark" file on disk for two
purposes:
- Track which timeline dirs are incomplete for handling on restart
- Avoid trying to create the same timeline twice at the same time.

The original purpose of handling restarts is now defunct, as we use
remote storage as the source of truth and clean up any trash timeline
dirs on startup. Using the file to mutually exclude creation operations
is error prone compared with just doing it in memory, and the existing
checks happened some way into the creation operation, and could expose
errors as 500s (anyhow::Errors) rather than something clean.

## Summary of changes

- Creations are now mutually excluded in memory (using
`Tenant::timelines_creating`), rather than relying on a file on disk for
coordination.
- Acquiring unique access to the timeline ID now happens earlier in the
request.
- Creating the same timeline which already exists is now a 201: this
simplifies retry handling for clients.
- 409 is still returned if a timeline with the same ID is still being
created: if this happens it is probably because the client timed out an
earlier request and has retried.
- Colliding timeline creation requests should no longer return 500
errors

This paves the way to entirely removing uninit markers in a subsequent
change.

---------

Co-authored-by: Joonas Koivunen <joonas@neon.tech>
2023-12-15 08:51:23 +00:00
John Spray
c4e0ef507f pageserver: heatmap uploads (#6050)
Dependency (commits inline):
https://github.com/neondatabase/neon/pull/5842

## Problem

Secondary mode tenants need a manifest of what to download. Ultimately
this will be some kind of heat-scored set of layers, but as a robust
first step we will simply use the set of resident layers: secondary
tenant locations will aim to match the on-disk content of the attached
location.

## Summary of changes

- Add heatmap types representing the remote structure
- Add hooks to Tenant/Timeline for generating these heatmaps
- Create a new `HeatmapUploader` type that is external to `Tenant`, and
responsible for walking the list of attached tenants and scheduling
heatmap uploads.

Notes to reviewers:
- Putting the logic for uploads (and later, secondary mode downloads)
outside of `Tenant` is an opinionated choice, motivated by:
- Enable future smarter scheduling of operations, e.g. uploading the
stalest tenant first, rather than having all tenants compete for a fair
semaphore on a first-come-first-served basis. Similarly for downloads,
we may wish to schedule the tenants with the hottest un-downloaded
layers first.
- Enable accessing upload-related state without synchronization (it
belongs to HeatmapUploader, rather than being some Mutex<>'d part of
Tenant)
- Avoid further expanding the scope of Tenant/Timeline types, which are
already among the largest in the codebase
- You might reasonably wonder how much of the uploader code could be a
generic job manager thing. Probably some of it: but let's defer pulling
that out until we have at least two users (perhaps secondary downloads
will be the second one) to highlight which bits are really generic.

Compromises:
- Later, instead of using digests of heatmaps to decide whether anything
changed, I would prefer to avoid walking the layers in tenants that
don't have changes: tracking that will be a bit invasive, as it needs
input from both remote_timeline_client and Layer.
2023-12-14 13:09:24 +00:00
Alexander Bayandin
0cd49cac84 test_compatibility: make it use initdb.tar.zst 2023-12-13 15:04:25 -06:00