Commit Graph

1512 Commits

Author SHA1 Message Date
Joonas Koivunen
a06c8e9add inmemory_layer: drop impl Layer 2023-08-28 12:42:28 +03:00
Joonas Koivunen
18eefd61eb inmemory_layer: less warnings 2023-08-28 12:42:28 +03:00
Joonas Koivunen
a2de0574b5 inmemorylayer: flush integration, partial? 2023-08-28 12:42:28 +03:00
Joonas Koivunen
aa8e954197 layer_manager, layer_access_stats: remove witness sidequest
it was interfering with me moving responsibilities back and forth
2023-08-28 12:42:28 +03:00
Joonas Koivunen
30847e59b9 remove remote_layer instead of keep fixing 2023-08-28 12:42:28 +03:00
Joonas Koivunen
d930a581f8 layer_manager: compaction changes 2023-08-28 12:42:28 +03:00
Joonas Koivunen
931c22545b compaction: clippies 2023-08-28 12:42:28 +03:00
Joonas Koivunen
366f3c8ff8 compaction: reflect LayerE now managing remote client 2023-08-28 12:42:28 +03:00
Joonas Koivunen
26c39d7b4c timeline: pub(crate) compaction 2023-08-28 12:42:28 +03:00
Joonas Koivunen
6ffa5138ce compaction: upload index on success
otherwise test_gc_of_remote_layers fails
2023-08-28 12:42:28 +03:00
Joonas Koivunen
975e1558cc compaction: integration 2023-08-28 12:42:28 +03:00
Joonas Koivunen
82a955ebfe layer_manager: resident layer flush l0 changes 2023-08-28 12:42:28 +03:00
Joonas Koivunen
82596f8807 delta_layer: reflect non-async LayerE::for_written 2023-08-28 12:42:28 +03:00
Joonas Koivunen
e3e57579a1 integrate: download_all_layers
this time around with graceful cancellation.
2023-08-28 12:42:28 +03:00
Joonas Koivunen
b4a0f8baf7 integrate: Timeline::get_value_reconstruct_data 2023-08-28 12:42:28 +03:00
Joonas Koivunen
2e686ed6ea eviction: integration
- evictiontask: remove unused imports
- eviction_task and dube: cleanup
- timeline: pub(crate) eviction
- timeline: adjust to "layere: adjust eviction"
- test: remove layer_eviction_aba_fails because it can no longer happen
- test: fix up evicts later test with ability to await for eviction
- eviction_task: more unused imports
- eviction: clippy
- eviction_task: more clippy
- fixup eviction: docs
- eviction: hold only Arc<Layer> after checking downloadedness
- refactor earlier eviction: use drop_eviction_guard instead
- dube: evict in spawned tasks
- timeline, eviction: evict in spawned
- eviction: add more errors
- evict_layers: remove witness
- eviction: post-witness forgotten panic
- eviction: remove blog references
2023-08-28 12:42:28 +03:00
Joonas Koivunen
c46f72d411 create_image_layers integration (multifile) 2023-08-28 12:42:28 +03:00
Joonas Koivunen
ed46713e5c remote_timeline_client: pub(crate) on upload 2023-08-28 12:42:28 +03:00
Joonas Koivunen
c228cb7b3f remote_timeline_client: continued integration work post ResidentLayer 2023-08-28 12:42:28 +03:00
Joonas Koivunen
c88e4a0974 layer_manager: integration 2023-08-28 12:42:28 +03:00
Joonas Koivunen
b71a2f4cb2 load_layer_map: integration 2023-08-28 12:42:23 +03:00
Joonas Koivunen
235a8cbd28 wip: LayerE 2023-08-28 12:41:31 +03:00
Joonas Koivunen
f36658ac10 layerdesc: add from_filename 2023-08-28 12:41:31 +03:00
Joonas Koivunen
f8227da9da unrelated: layer_manager: avoid arc cloning 2023-08-28 12:41:31 +03:00
Joonas Koivunen
fbcd174489 load_layer_map: schedule deletions for any future layers (#5103)
Unrelated fixes noticed while integrating #4938.

- Stop leaking future layers in remote storage
- We schedule extra index_part uploads if layer name to be removed was
not actually present
2023-08-28 10:51:49 +03:00
John Spray
b758bf47ca pageserver: refactor TimelineMetadata serialization in IndexPart (#5091)
## Problem

The `metadata_bytes` field of IndexPart required explicit
deserialization & error checking everywhere it was used -- there isn't
anything special about this structure that should prevent it from being
serialized & deserialized along with the rest of the structure.

## Summary of changes

- Implement Serialize and Deserialize for TimelineMetadata
- Replace IndexPart::metadata_bytes with a simpler `metadata`, that can
be used directly.

---------

Co-authored-by: Arpad Müller <arpad-m@users.noreply.github.com>
2023-08-25 16:16:20 +01:00
Arpad Müller
8c13296add Remove BlockReader::read_blk in favour of BlockCursor (#5015)
## Problem

We want to make `read_blk` an async function, but outside of
`async_trait`, which allocates, and nightly features, we can't use async
fn's in traits.

## Summary of changes

* Remove all uses of `BlockReader::read_blk` in favour of using block
  cursors, at least where the type of the `BlockReader` is behind a
  generic
* Introduce a `BlockReaderRef` enum that lists all implementors of
  `BlockReader::read_blk`.
* Remove `BlockReader::read_blk` and move its implementations into
  inherent functions on the types instead.

We don't turn `read_blk` into an async fn yet, for that we also need to
modify the page cache. So this is a preparatory PR, albeit an important
one.

Part of #4743.
2023-08-25 12:28:01 +02:00
Arpad Müller
227c87e333 Make EphemeralFile::write_blob function async (#5056)
## Problem

The `EphemeralFile::write_blob` function accesses the page cache
internally. We want to require `async` for these accesses in #5023.

## Summary of changes

This removes the implementaiton of the `BlobWriter` trait for
`EphemeralFile` and turns the `write_blob` function into an inherent
function. We can then make it async as well as the `push_bytes`
function. We move the `SER_BUFFER` thread-local into the
`InMemoryLayerInner` so that the same buffer can be accessed by
different threads as the async is (potentially) moved between threads.

Part of #4743, preparation for #5023.
2023-08-24 19:18:30 +02:00
Chengpeng Yan
fa74d5649e rename EphmeralFile::size to EphemeralFile::len (#5076)
## Problem
close https://github.com/neondatabase/neon/issues/5034

## Summary of changes
Based on the
[comment](https://github.com/neondatabase/neon/pull/4994#discussion_r1297277922).
Just rename the `EphmeralFile::size` to `EphemeralFile::len`.
2023-08-24 16:41:57 +02:00
Joonas Koivunen
f70871dfd0 internal-devx: pageserver future layers (#5092)
I've personally forgotten why/how can we have future layers during
reconciliation. Adds `#[cfg(feature = "testing")]` logging when we
upload such index_part.json, with a cross reference to where the cleanup
happens.

Latest private slack thread:
https://neondb.slack.com/archives/C033RQ5SPDH/p1692879032573809?thread_ts=1692792276.173979&cid=C033RQ5SPDH

Builds upon #5074. Should had been considered on #4837.
2023-08-24 17:22:36 +03:00
Joonas Koivunen
76aa01c90f refactor: single phase Timeline::load_layer_map (#5074)
Current implementation first calls `load_layer_map`, which loads all
local layers, cleans up files, leave cleaning up stuff to "second
function". Then the "second function" is finally called, it does not do
the cleanup and some of the first functions setup can torn down. "Second
function" is actually both `reconcile_with_remote` and
`create_remote_layers`.

This change makes it a bit more verbose but in one phase with the
following sub-steps:
1. scan the timeline directory
2. delete extra files
    - now including on-demand download files
    - fixes #3660
3. recoincile the two sources of layers (directory, index_part)
4. rename_to_backup future layers, short layers
5. create the remaining as layers

Needed by #4938.

It was also noticed that this is blocking code in an `async fn` so just
do it in a `spawn_blocking`, which should be healthy for our startup
times. Other effects includes hopefully halving of `stat` calls; extra
calls which were not done previously are now done for the future layers.

Co-authored-by: Christian Schwarz <christian@neon.tech>
Co-authored-by: John Spray <john@neon.tech>
2023-08-24 16:07:40 +03:00
John Spray
3e2f0ffb11 libs: make backoff::retry() take a cancellation token (#5065)
## Problem

Currently, anything that uses backoff::retry will delay the join of its
task by however long its backoff sleep is, multiplied by its max
retries.

Whenever we call a function that sleeps, we should be passing in a
CancellationToken.

## Summary of changes

- Add a `Cancel` type to backoff::retry that wraps a CancellationToken
and an error `Fn` to generate an error if the cancellation token fires.
- In call sites that already run in a `task_mgr` task, use
`shutdown_token()` to provide the token. In other locations, use a dead
`CancellationToken` to satisfy the interface, and leave a TODO to fix it
up when we broaden the use of explicit cancellation tokens.
2023-08-24 14:54:46 +03:00
Joonas Koivunen
ad8d777c1c refactor: remove is_incremental=true for ImageLayers footgun (#5061)
Accidentially giving is_incremental=true for ImageLayers costs a lot of
debugging time. Removes all API which would allow to do that. They can
easily be restored later *when needed*.

Split off from #4938.
2023-08-22 22:12:05 +03:00
Joonas Koivunen
533a92636c refactor: pre-cleanup Layer, PersistentLayer and impls (#5059)
Remove pub but dead code, move trait methods as inherent methods, remove
unnecessary. Split off from #4938.
2023-08-22 21:14:28 +03:00
Christian Schwarz
8cd20485f8 metrics: smgr query time: add a pre-aggregated histogram (#5064)
When doing global queries in VictoriaMetrics, the per-timeline
histograms make us run into cardinality limits.

We don't want to give them up just yet because we don't
have an alternative for drilling down on timeline-specific
performance issues.

So, add a pre-aggregated histogram and add observations to it
whenever we add observations to the per-timeline histogram.

While we're at it, switch to using a strummed enum for the operation
type names.
2023-08-22 20:08:31 +03:00
Joonas Koivunen
933a869f00 refactor: compaction becomes async again (#5058)
#4938 will make on-demand download of layers in compaction possible, so
it's not suitable for our "policy" of no `spawn_blocking(|| ...
Handle::block_on(async { spawn_blocking(...).await })` because this
poses a clear deadlock risk. Nested spawn_blockings are because of the
download using `tokio::fs::File`.

- Remove `spawn_blocking` from caller of `compact_level0_phase1`
- Remove `Handle::block_on` from `compact_level0_phase1` (indentation
change)
- Revert to `AsLayerDesc::layer_desc` usage temporarily (until it
becomes field access in #4938)
2023-08-22 20:03:14 +03:00
John Spray
615a490239 pageserver: refactor Tenant/Timeline args into structs (#5053)
## Problem

There are some common types that we pass into tenants and timelines as
we construct them, such as remote storage and the broker client.
Currently the list is small, but this is likely to grow -- the deletion
queue PR (#4960) pushed some methods to the point of clippy complaining
they had too many args, because of the extra deletion queue client being
passed around.

There are some shared objects that currently aren't passed around
explicitly because they use a static `once_cell` (e.g.
CONCURRENT_COMPACTIONS), but as we add more resource management and
concurreny control over time, it will be more readable & testable to
pass a type around in the respective Resources object, rather than to
coordinate via static objects. The `Resources` structures in this PR
will make it easier to add references to central coordination functions,
without having to rely on statics.

## Summary of changes

- For `Tenant`, the `broker_client` and `remote_storage` are bundled
into `TenantSharedResources`
- For `Timeline`, the `remote_client` is wrapped into
`TimelineResources`.

Both of these structures will get an additional deletion queue member in
#4960.
2023-08-21 17:30:28 +01:00
John Spray
b95addddd5 pageserver: do not read redundant timeline_layers from IndexPart, so that we can remove it later (#4972)
## Problem

IndexPart contains two redundant lists of layer names: a set of the
names, and then a map of name to metadata.

We already required that all the layers in `timeline_layers` are also in
`layers_metadata`, in `initialize_with_current_remote_index_part`, so if
there were any index_part.json files in the field that relied on these
sets being different, they would already be broken.

## Summary of changes

`timeline_layers` is made private and no longer read at runtime. It is
still serialized, but not deserialized.

`disk_consistent_lsn` is also made private, as this field only exists
for convenience of humans reading the serialized JSON.

This prepares us to entirely remove `timeline_layers` in a future
release, once this change is fully deployed, and therefore no
pageservers are trying to read the field.
2023-08-21 14:29:36 +03:00
Dmitry Rodionov
9140a950f4 Resume tenant deletion on attach (#5039)
I'm still a bit nervous about attach -> crash case. But it should work.
(unlike case with timeline). Ideally would be cool to cover this with
test.

This continues tradition of adding bool flags for Tenant::set_stopping.
Probably lifecycle project will help with fixing it.
2023-08-20 12:28:50 +03:00
Arpad Müller
a23b0773f1 Fix DeltaLayer dumping (#5045)
## Problem

Before, DeltaLayer dumping (via `cargo run --release -p pagectl --
print-layer-file` ) would crash as one can't call `Handle::block_on` in
an async executor thread.

## Summary of changes

Avoid the problem by using `DeltaLayerInner::load_keys` to load the keys
into RAM (which we already do during compaction), and then load the
values one by one during dumping.
2023-08-19 00:56:03 +02:00
Joonas Koivunen
368ee6c8ca refactor: failpoint support (#5033)
- move them to pageserver which is the only dependant on the crate fail
- "move" the exported macro to the new module
- support at init time the same failpoints as runtime

Found while debugging test failures and making tests more repeatable by
allowing "exit" from pageserver start via environment variables. Made
those changes to `test_gc_cutoff.py`.

---------

Co-authored-by: Christian Schwarz <christian@neon.tech>
2023-08-19 01:01:44 +03:00
Dmitry Rodionov
30888a24d9 Avoid flakiness in test_timeline_delete_fail_before_local_delete (#5032)
The problem was that timeline detail can return timelines in not only
active state. And by the time request comes timeline deletion can still
be in progress if we're unlucky (test execution happened to be slower
for some reason)

Reference for failed test run

https://neon-github-public-dev.s3.amazonaws.com/reports/pr-5022/5891420105/index.html#suites/f588e0a787c49e67b29490359c589fae/dab036e9bd673274

The error was `Exception: detail succeeded (it should return 404)`

reported by @koivunej
2023-08-18 20:49:11 +03:00
Dmitry Rodionov
f6c671c140 resume timeline deletions on attach (#5030)
closes [#5036](https://github.com/neondatabase/neon/issues/5036)
2023-08-18 20:48:33 +03:00
Christian Schwarz
7a63685cde simplify page-caching of EphemeralFile (#4994)
(This PR is the successor of https://github.com/neondatabase/neon/pull/4984 )

## Summary

The current way in which `EphemeralFile` uses `PageCache` complicates
the Pageserver code base to a degree that isn't worth it.
This PR refactors how we cache `EphemeralFile` contents, by exploiting
the append-only nature of `EphemeralFile`.

The result is that `PageCache` only holds `ImmutableFilePage` and
`MaterializedPage`.
These types of pages are read-only and evictable without write-back.
This allows us to remove the writeback code from `PageCache`, also
eliminating an entire failure mode.

Futher, many great open-source libraries exist to solve the problem of a
read-only cache,
much better than our `page_cache.rs` (e.g., better replacement policy,
less global locking).
With this PR, we can now explore using them.

## Problem & Analysis

Before this PR, `PageCache` had three types of pages:

* `ImmutableFilePage`: caches Delta / Image layer file contents
* `MaterializedPage`: caches results of Timeline::get (page
materialization)
* `EphemeralPage`: caches `EphemeralFile` contents

`EphemeralPage` is quite different from `ImmutableFilePage` and
`MaterializedPage`:

* Immutable and materialized pages are for the acceleration of (future)
reads of the same data using `PAGE_CACHE_SIZE * PAGE_SIZE` bytes of
DRAM.
* Ephemeral pages are a write-back cache of `EphemeralFile` contents,
i.e., if there is pressure in the page cache, we spill `EphemeralFile`
contents to disk.

`EphemeralFile` is only used by `InMemoryLayer`, for the following
purposes:
* **write**: when filling up the `InMemoryLayer`, via `impl BlobWriter
for EphemeralFile`
* **read**: when doing **page reconstruction** for a page@lsn that isn't
written to disk
* **read**: when writing L0 layer files, we re-read the `InMemoryLayer`
and put the contents into the L0 delta writer
(**`create_delta_layer`**). This happens every 10min or when
InMemoryLayer reaches 256MB in size.

The access patterns of the `InMemoryLayer` use case are as follows:

* **write**: via `BlobWriter`, strictly append-only
* **read for page reconstruction**: via `BlobReader`, random
* **read for `create_delta_layer`**: via `BlobReader`, dependent on
data, but generally random. Why?
* in classical LSM terms, this function is what writes the
memory-resident `C0` tree into the disk-resident `C1` tree
* in our system, though, the values of InMemoryLayer are stored in an
EphemeralFile, and hence they are not guaranteed to be memory-resident
* the function reads `Value`s in `Key, LSN` order, which is `!=` insert
order

What do these `EphemeralFile`-level access patterns mean for the page
cache?

* **write**:
* the common case is that `Value` is a WAL record, and if it isn't a
full-page-image WAL record, then it's smaller than `PAGE_SIZE`
* So, the `EphemeralPage` pages act as a buffer for these `< PAGE_CACHE`
sized writes.
* If there's no page cache eviction between subsequent
`InMemoryLayer::put_value` calls, the `EphemeralPage` is still resident,
so the page cache avoids doing a `write` system call.
* In practice, a busy page server will have page cache evictions because
we only configure 64MB of page cache size.
* **reads for page reconstruction**: read acceleration, just as for the
other page types.
* **reads for `create_delta_layer`**:
* The `Value` reads happen through a `BlockCursor`, which optimizes the
case of repeated reads from the same page.
* So, the best case is that subsequent values are located on the same
page; hence `BlockCursor`s buffer is maximally effective.
* The worst case is that each `Value` is on a different page; hence the
`BlockCursor`'s 1-page-sized buffer is ineffective.
* The best case translates into `256MB/PAGE_SIZE` page cache accesses,
one per page.
    * the worst case translates into `#Values` page cache accesses
* again, the page cache accesses must be assumed to be random because
the `Value`s aren't accessed in insertion order but `Key, LSN` order.

## Summary of changes

Preliminaries for this PR were:

- #5003
- #5004 
- #5005 
  - uncommitted microbenchmark in #5011 

Based on the observations outlined above, this PR makes the following
changes:

* Rip out `EphemeralPage` from `page_cache.rs`
* Move the `block_io::FileId` to `page_cache::FileId`
* Add a `PAGE_SIZE`d buffer to the `EphemeralPage` struct.
  It's called `mutable_tail`.
* Change `write_blob` to use `mutable_tail` for the write buffering
instead of a page cache page.
* if `mutable_tail` is full, it writes it out to disk, zeroes it out,
and re-uses it.
* There is explicitly no double-buffering, so that memory allocation per
`EphemeralFile` instance is fixed.
* Change `read_blob` to return different `BlockLease` variants depending
on `blknum`
* for the `blknum` that corresponds to the `mutable_tail`, return a ref
to it
* Rust borrowing rules prevent `write_blob` calls while refs are
outstanding.
  * for all non-tail blocks, return a page-cached `ImmutablePage`
* It is safe to page-cache these as ImmutablePage because EphemeralFile
is append-only.

## Performance 

How doe the changes above affect performance?
M claim is: not significantly.

* **write path**:
* before this PR, the `EphemeralFile::write_blob` didn't issue its own
`write` system calls.
* If there were enough free pages, it didn't issue *any* `write` system
calls.
* If it had to evict other `EphemeralPage`s to get pages a page for its
writes (`get_buf_for_write`), the page cache code would implicitly issue
the writeback of victim pages as needed.
* With this PR, `EphemeralFile::write_blob` *always* issues *all* of its
*own* `write` system calls.
* Also, the writes are explicit instead of implicit through page cache
write back, which will help #4743
* The perf impact of always doing the writes is the CPU overhead and
syscall latency.
* Before this PR, we might have never issued them if there were enough
free pages.
* We don't issue `fsync` and can expect the writes to only hit the
kernel page cache.
* There is also an advantage in issuing the writes directly: the perf
impact is paid by the tenant that caused the writes, instead of whatever
tenant evicts the `EphemeralPage`.
* **reads for page reconstruction**: no impact.
* The `write_blob` function pre-warms the page cache when it writes the
`mutable_tail` to disk.
* So, the behavior is the same as with the EphemeralPages before this
PR.
* **reads for `create_delta_layer`**: no impact.
  * Same argument as for page reconstruction.
  * Note for the future:
* going through the page cache likely causes read amplification here.
Why?
* Due to the `Key,Lsn`-ordered access pattern, we don't read all the
values in the page before moving to the next page. In the worst case, we
might read the same page multiple times to read different `Values` from
it.
    * So, it might be better to bypass the page cache here.
    * Idea drafts:
      * bypass PS page cache + prefetch pipeline + iovec-based IO
* bypass PS page cache + use `copy_file_range` to copy from ephemeral
file into the L0 delta file, without going through user space
2023-08-18 20:31:03 +03:00
Arpad Müller
f4da010aee Make the compaction warning more tolerant (#5024)
## Problem

The performance benchmark in `test_runner/performance/test_layer_map.py`
is currently failing due to the warning added in #4888.

## Summary of changes

The test mentioned has a `compaction_target_size` of 8192, which is just
one page size. This is an unattainable goal, as we generate at least
three pages: one for the header, one for the b-tree (minimally sized
ones have just the root node in a single page), one for the data.

Therefore, we add two pages to the warning limit. The warning text
becomes a bit less accurate but I think this is okay.
2023-08-18 16:36:31 +02:00
Joonas Koivunen
67af24191e test: cleanup remote_timeline_client tests (#5013)
I will have to change these as I change remote_timeline_client api in
#4938. So a bit of cleanup, handle my comments which were just resolved
during initial review.

Cleanup:
- use unwrap in tests instead of mixed `?` and `unwrap`
- use `Handle` instead of `&'static Reactor` to make the
RemoteTimelineClient more natural
- use arrays in tests
- use plain `#[tokio::test]`
2023-08-17 19:27:30 +03:00
Joonas Koivunen
6af5f9bfe0 fix: format context (#5022)
We return an error with unformatted `{timeline_id}`.
2023-08-17 14:30:25 +00:00
Dmitry Rodionov
d8b0a298b7 Do not attach deleted tenants (#5008)
Rather temporary solution before proper:
https://github.com/neondatabase/neon/issues/5006

It requires more plumbing so lets not attach deleted tenants first and
then implement resume.

Additionally fix `assert_prefix_empty`. It had a buggy prefix calculation,
and since we always asserted for absence of stuff it worked. Here I
started to assert for presence of stuff too and it failed. Added more
"presence" asserts to other places to be confident that it works.

Resolves [#5016](https://github.com/neondatabase/neon/issues/5016)
2023-08-17 13:46:49 +03:00
Christian Schwarz
957af049c2 ephemeral file: refactor write_blob impl to concentrate mutable state (#5004)
Before this patch, we had the `off` and `blknum` as function-wide
mutable state. Now it's contained in the `Writer` struct.

The use of `push_bytes` instead of index-based filling of the buffer
also makes it easier to reason about what's going on.

This is prep for https://github.com/neondatabase/neon/pull/4994
2023-08-17 13:07:25 +03:00
Joonas Koivunen
d3612ce266 delta_layer: Restore generic from last week (#5014)
Restores #4937 work relating to the ability to use `ResidentDeltaLayer`
(which is an Arc wrapper) in #4938 for the ValueRef's by removing the
borrow from `ValueRef` and providing it from an upper layer.

This should not have any functional changes, most importantly, the
`main` will continue to use the borrowed `DeltaLayerInner`. It might be
that I can change #4938 to be like this. If that is so, I'll gladly rip
out the `Ref` and move the borrow back. But I'll first want to look at
the current test failures.
2023-08-17 11:47:31 +03:00