Commit Graph

2402 Commits

Author SHA1 Message Date
Christian Schwarz
dde46aa9b0 https://github.com/neondatabase/neon/pull/8537#discussion_r1726852836 2024-08-22 13:46:28 +00:00
Christian Schwarz
06cb7b9845 more clippy (why doesn't my local clippy find this?) 2024-08-22 13:37:31 +00:00
Christian Schwarz
20d97f8430 clippy 2024-08-22 12:45:13 +00:00
Christian Schwarz
78d1ba4f5d Merge from main + revise everything to use u64==usize 2024-08-22 12:42:02 +00:00
John Spray
7c74112b2a pageserver: batch InMemoryLayer puts, remove need to sort items by LSN during ingest (#8591)
## Problem/Solution

TimelineWriter::put_batch is simply a loop over individual puts. Each
put acquires and releases locks, and checks for potentially starting a
new layer. Batching these is more efficient, but more importantly
unlocks future changes where we can pre-build serialized buffers much
earlier in the ingest process, potentially even on the safekeeper
(imagine a future model where some variant of DatadirModification lives
on the safekeeper).

Ensuring that the values in put_batch are written to one layer also
enables a simplification upstream, where we no longer need to write
values in LSN-order. This saves us a sort, but also simplifies follow-on
refactors to DatadirModification: we can store metadata keys and data
keys separately at that level without needing to zip them together in
LSN order later.

## Why?

In this PR, these changes are simplify optimizations, but they are
motivated by evolving the ingest path in the direction of disentangling
extracting DatadirModification from Timeline. It may not obvious how
right now, but the general idea is that we'll end up with three phases
of ingest:
- A) Decode walrecords and build a datadirmodification with all the
simple data contents already in a big serialized buffer ready to write
to an ephemeral layer **<-- this part can be pipelined and parallelized,
and done on a safekeeper!**
- B) Let that datadirmodification see a Timeline, so that it can also
generate all the metadata updates that require a read-modify-write of
existing pages
- C) Dump the results of B into an ephemeral layer.

Related: https://github.com/neondatabase/neon/issues/8452

## Caveats

Doing a big monolithic buffer of values to write to disk is ordinarily
an anti-pattern: we prefer nice streaming I/O. However:
- In future, when we do this first decode stage on the safekeeper, it
would be inefficient to serialize a Vec of Value, and then later
deserialize it just to add blob size headers while writing into the
ephemeral layer format. The idea is that for bulk write data, we will
serialize exactly once.
- The monolithic buffer is a stepping stone to pipelining more of this:
by seriailizing earlier (rather than at the final put_value), we will be
able to parallelize the wal decoding and bulk serialization of data page
writes.
- The ephemeral layer's buffered writer already stalls writes while it
waits to flush: so while yes we'll stall for a couple milliseconds to
write a couple megabytes, we already have stalls like this, just
distributed across smaller writes.

## Benchmarks

This PR is primarily a stepping stone to safekeeper ingest filtering,
but also provides a modest efficiency improvement to the `wal_recovery`
part of `test_bulk_ingest`.

test_bulk_ingest:

```
test_bulk_insert[neon-release-pg16].insert: 23.659 s
test_bulk_insert[neon-release-pg16].pageserver_writes: 5,428 MB
test_bulk_insert[neon-release-pg16].peak_mem: 626 MB
test_bulk_insert[neon-release-pg16].size: 0 MB
test_bulk_insert[neon-release-pg16].data_uploaded: 1,922 MB
test_bulk_insert[neon-release-pg16].num_files_uploaded: 8 
test_bulk_insert[neon-release-pg16].wal_written: 1,382 MB
test_bulk_insert[neon-release-pg16].wal_recovery: 18.981 s
test_bulk_insert[neon-release-pg16].compaction: 0.055 s

vs. tip of main:
test_bulk_insert[neon-release-pg16].insert: 24.001 s
test_bulk_insert[neon-release-pg16].pageserver_writes: 5,428 MB
test_bulk_insert[neon-release-pg16].peak_mem: 604 MB
test_bulk_insert[neon-release-pg16].size: 0 MB
test_bulk_insert[neon-release-pg16].data_uploaded: 1,922 MB
test_bulk_insert[neon-release-pg16].num_files_uploaded: 8 
test_bulk_insert[neon-release-pg16].wal_written: 1,382 MB
test_bulk_insert[neon-release-pg16].wal_recovery: 23.586 s
test_bulk_insert[neon-release-pg16].compaction: 0.054 s
```
2024-08-22 10:04:42 +00:00
Alex Chi Z.
a968554a8c fix(pageserver): unify initdb optimization for sparse keyspaces; fix force img generation (#8776)
close https://github.com/neondatabase/neon/issues/8558

* Directly generate image layers for sparse keyspaces during initdb
optimization.
* Support force image layer generation for sparse keyspaces.
* Fix a bug of incorrect image layer key range in case of duplicated
keys. (The added line: `start = img_range.end;`) This can cause
overlapping image layers and keys to disappear.

---------

Signed-off-by: Alex Chi Z <chi@neon.tech>
2024-08-21 21:25:21 +01:00
Christian Schwarz
0d6ae6e18b fix doc comment 2024-08-21 19:22:29 +00:00
Christian Schwarz
d5a17b09e4 Merge remote-tracking branch 'origin/main' into problame/inmemory-layer-offset-u32 2024-08-21 18:54:23 +00:00
Christian Schwarz
e4af31cd7d packed index value 2024-08-21 18:51:28 +00:00
Joonas Koivunen
07b7c63975 test: avoid some too long shutdowns by flushing before shutdown (#8772)
After #8655, we needed to mark some tests to shut down immediately. To
aid these tests, try the new pattern of `flush_ep_to_pageserver`
followed by a non-compacting checkpoint. This moves the general graceful
shutdown problem of having too much to flush at shutdown into the test.
Also, add logging for how long the graceful shutdown took, if we got to
complete it for faster log eyeballing.

Fixes: #8712
Cc: #8715, #8708
2024-08-21 14:26:27 -04:00
Christian Schwarz
4c115bc9eb add basic test for EphemeralFile 2024-08-21 16:23:33 +00:00
Christian Schwarz
f686b91693 clippy 2024-08-21 15:58:16 +00:00
Christian Schwarz
9d9b5f272c fix release build 2024-08-21 15:54:49 +00:00
Christian Schwarz
2159ae8e92 commentary in inmemory_layer.rs 2024-08-21 15:41:22 +00:00
Christian Schwarz
13ec4a073c the great rename 2024-08-21 15:33:03 +00:00
Christian Schwarz
f245fa4c04 coverage for peeking_take_while deciding to skip 2024-08-21 14:38:50 +00:00
Christian Schwarz
a38714a93d tests for short chunk reads + refactor for ValueReadState 2024-08-21 14:28:44 +00:00
Christian Schwarz
21b684718e pageserver: add counter for wait time on background loop semaphore (#8769)
## Problem

Compaction jobs and other background loops are concurrency-limited
through a global semaphore.

The current counters allow quantifying how _many_ tasks are waiting.
But there is no way to tell how _much_ delay is added by the semaphore.

So, add a counter that aggregates the wall clock time seconds spent
acquiring the semaphore.

The metrics can be used as follows:

* retroactively calculate average acquisition time in a given time range
* compare the degree of background loop backlog among pageservers

The metric is insufficient to calculate

* run-up of ongoing acquisitions that haven't finished acquiring yet
* Not easily feasible because ["Cancelling a call to acquire makes you
lose your place in the
queue"](https://docs.rs/tokio/latest/tokio/sync/struct.Semaphore.html#method.acquire)

## Summary of changes

* Refactor the metrics to follow the current best practice for typed
metrics in `metrics.rs`.
* Add the new counter.
2024-08-21 10:55:01 +00:00
Christian Schwarz
5c448cea01 permutation testing 2024-08-21 08:58:59 +00:00
Alex Chi Z.
c8b9116a97 impr(pageserver): abort on fatal I/O writer error (#8777)
part of https://github.com/neondatabase/neon/issues/8140

The blob writer path now uses `maybe_fatal_err`

Signed-off-by: Alex Chi Z <chi@neon.tech>
2024-08-20 20:05:33 +01:00
John Spray
beefc7a810 pageserver: add metric pageserver_secondary_heatmap_total_size (#8768)
## Problem

We don't have a convenient way for a human to ask "how far are secondary
downloads along for this tenant".

This is useful when driving migrations of tenants to the storage
controller, as we first create a secondary location and want to see it
warm up before we cut over. That can already be done via storcon_cli,
but we would like a way that doesn't require direct API access.

## Summary of changes

Add a metric that reports to total size of layers in the heatmap: this
may be used in conjunction with the existing
`pageserver_secondary_resident_physical_size` to estimate "warmth" of
the secondary location.
2024-08-20 19:47:42 +01:00
Christian Schwarz
1feca8d84c add test testing partial error behavior 2024-08-20 15:54:20 +00:00
Christian Schwarz
34d3d4e312 add basic test for valueread reuse 2024-08-20 15:24:04 +00:00
Christian Schwarz
9f27e36fb4 move MockFile to bottom 2024-08-20 15:18:08 +00:00
Christian Schwarz
43e2d1d0be add two recorder tests (more to come) 2024-08-20 14:11:48 +00:00
Christian Schwarz
c6f4fce1b4 move MockFile section after blackbox test 2024-08-20 13:28:26 +00:00
Christian Schwarz
c047d01850 add blackbox test 2024-08-20 13:27:19 +00:00
Christian Schwarz
39707294aa add MockFile infrastructure 2024-08-20 12:33:15 +00:00
Christian Schwarz
e68555e6ee fix the compile errors & progress with testability 2024-08-20 12:08:21 +00:00
Christian Schwarz
521da324ab Revert "try a closure approach, also has same error "Send is not general enough""
This reverts commit ef2b384cf8.
2024-08-20 10:07:07 +00:00
Christian Schwarz
ef2b384cf8 try a closure approach, also has same error "Send is not general enough" 2024-08-20 09:53:41 +00:00
Alexander Bayandin
c96593b473 Make Postgres 16 default version (#8745)
## Problem

The default Postgres version is set to 15 in code, while we use 16 in
most of the other places (and Postgres 17 is coming)

## Summary of changes
- Run `benchmarks` job with Postgres 16 (instead of Postgres 14)
- Set `DEFAULT_PG_VERSION` to 16 in all places
- Remove deprecated `--pg-version` pytest argument
- Update `test_metadata_bincode_serde_ensure_roundtrip` for Postgres 16
2024-08-20 10:46:58 +01:00
Christian Schwarz
ef57e73fbf task_mgr::spawn: require a TenantId (#8462)
… to dis-incentivize global tasks via task_mgr in the future

(As of https://github.com/neondatabase/neon/pull/8339 all remaining
task_mgr usage is tenant or timeline scoped.)
2024-08-20 08:26:44 +00:00
Christian Schwarz
6efd9fb0a6 WIP: refactor for unit testing 2024-08-19 16:56:24 +00:00
Christian Schwarz
0d22d4d310 https://github.com/neondatabase/neon/pull/8537#discussion_r1719877858 2024-08-19 15:26:56 +00:00
Christian Schwarz
10c7419fee https://github.com/neondatabase/neon/pull/8537#discussion_r1719830114 2024-08-19 15:22:33 +00:00
Christian Schwarz
eb7241c798 l0_flush: remove support for mode page-cached (#8739)
It's been rolled out everywhere, no configs are referencing it.

All code that's made dead by the removal of the config option is removed
as part of this PR.

The `page_caching::PreWarmingWriter` in `::No` mode is equivalent to a
`size_tracking_writer`, so, use that.

part of https://github.com/neondatabase/neon/issues/7418
2024-08-19 16:35:34 +02:00
Arpad Müller
188bde7f07 Default image compression to zstd at level 1 (#8677)
After the rollout has succeeded, we now set the default image
compression to be enabled.

We also remove its explicit mention from `neon_fixtures.py` added in
#8368 as it is now the default (and we switch to `zstd(1)` which is a
bit nicer on CPU time).

Part of https://github.com/neondatabase/neon/issues/5431
2024-08-18 18:32:10 +01:00
John Spray
e2d89f7991 pageserver: prioritize secondary downloads to get most recent layers first, except l0s (#8729)
## Problem

When a secondary location is trying to catch up while a tenant is
receiving new writes, it can become quite wasteful:
- Downloading L0s which are soon destroyed by compaction to L1s
- Downloading older layer files which are soon made irrelevant when
covered by image layers.

## Summary of changes

Sort the layer files in the heatmap:
- L0 layers are the lowest priority
- Other layers are sorted to download the highest LSNs first.
2024-08-16 14:35:02 +02:00
Joonas Koivunen
4763a960d1 chore: log if we have an open layer or any frozen on shutdown (#8740)
Some benchmarks are failing with a "long" flushing, which might be
because there is a queue of in-memory layers, or something else. Add
logging to narrow it down.

Private slack DM ref:
https://neondb.slack.com/archives/D049K7HJ9JM/p1723727305238099
2024-08-16 06:10:05 +01:00
Christian Schwarz
fb78185074 merging of adjacent chunk reads, up to max batch size 2024-08-15 11:31:24 +00:00
Christian Schwarz
6f65b4d2d3 don't think in pages, but DIO chunks; remove read_page & page_caching remnants 2024-08-15 11:28:34 +00:00
Alexander Bayandin
a9c28be7d0 fix(pageserver): allow unused_imports in download.rs on macOS (#8733)
## Problem

On macOS, clippy fails with the following error:

```
error: unused import: `crate::virtual_file::owned_buffers_io::io_buf_ext::IoBufExt`
  --> pageserver/src/tenant/remote_timeline_client/download.rs:26:5
   |
26 | use crate::virtual_file::owned_buffers_io::io_buf_ext::IoBufExt;
   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
   |
   = note: `-D unused-imports` implied by `-D warnings`
   = help: to override `-D warnings` add `#[allow(unused_imports)]`
```

Introduced in https://github.com/neondatabase/neon/pull/8717

## Summary of changes
- allow `unused_imports` for
`crate::virtual_file::owned_buffers_io::io_buf_ext::IoBufExt` on macOS
in download.rs
2024-08-15 10:06:28 +01:00
Christian Schwarz
37bfa04996 implement coalescing of multiple reads onto same page 2024-08-14 19:58:26 +00:00
Christian Schwarz
332ca2bf09 WIP 2024-08-14 19:58:26 +00:00
Christian Schwarz
168913bdf0 refactor(write path): newtype to enforce use of fully initialized slices (#8717)
The `tokio_epoll_uring::Slice` / `tokio_uring::Slice` type is weird.
The new `FullSlice` newtype is better. See the doc comment for details.

The naming is not ideal, but we'll clean that up in a future refactoring
where we move the `FullSlice` into `tokio_epoll_uring`. Then, we'll do
the following:
* tokio_epoll_uring::Slice is removed
* `FullSlice` becomes `tokio_epoll_uring::IoBufView`
* new type `tokio_epoll_uring::IoBufMutView` for the current
`tokio_epoll_uring::Slice<IoBufMut>`

Context
-------

I did this work in preparation for
https://github.com/neondatabase/neon/pull/8537.
There, I'm changing the type that the `inmemory_layer.rs` passes to
`DeltaLayerWriter::put_value_bytes` and thus it seemed like a good
opportunity to make this cleanup first.
2024-08-14 21:57:17 +02:00
Joonas Koivunen
60fc1e8cc8 chore: even more responsive compaction cancellation (#8725)
Some benchmarks and tests might still fail because of #8655 (tracked in
#8708) because we are not fast enough to shut down ([one evidence]).
Partially this is explained by the current validation mode of streaming
k-merge, but otherwise because that is where we use a lot of time in
compaction. Outside of L0 => L1 compaction, the image layer generation
is already guarded by vectored reads doing cancellation checks.

32768 is a wild guess based on looking how many keys we put in each
layer in a bench (1-2 million), but I assume it will be good enough
divisor. Doing checks more often will start showing up as contention
which we cannot currently measure. Doing checks less often might be
reasonable.

[one evidence]:
https://neon-github-public-dev.s3.amazonaws.com/reports/main/10384136483/index.html#suites/9681106e61a1222669b9d22ab136d07b/96e6d53af234924/

Earlier PR: #8706.
2024-08-14 14:48:15 +01:00
Joonas Koivunen
6c9e3c9551 refactor: error/anyhow::Error wrapping (#8697)
We can get CompactionError::Other(Cancelled) via the error handling with
a few ways.
[evidence](https://neon-github-public-dev.s3.amazonaws.com/reports/pr-8655/10301613380/index.html#suites/cae012a1e6acdd9fdd8b81541972b6ce/653a33de17802bb1/).
Hopefully fix it by:

1. replace the `map_err` which hid the
`GetReadyAncestorError::Cancelled` with `From<GetReadyAncestorError> for
GetVectoredError` conversion
2. simplifying the code in pgdatadir_mapping to eliminate the token
anyhow wrapping for deserialization errors
3. stop wrapping GetVectoredError as anyhow errors
4. stop wrapping PageReconstructError as anyhow errors

Additionally, produce warnings if we treat any other error (as was legal
before this PR) as missing key.

Cc: #8708.
2024-08-14 12:45:56 +01:00
John Spray
19d69d515c pageserver: evict covered layers earlier (#8679)
## Problem

When pageservers do compaction, they frequently create image layers that
make earlier layers un-needed for reads, but then keep those earlier
layers around for 24 hours waiting for time-based eviction to expire
them.

Now that we track layer visibility, we can use it as an input to
eviction, and avoid the 24 hour "disk bump" that happens around
pageserver restarts.

## Summary of changes

- During time-based eviction, if a layer is marked Covered, use the
eviction period as the threshold: i.e. these layers get to remain
resident for at least one iteration of the eviction loop, but then get
evicted. With current settings this means they get evicted after 1h
instead of 24h.
- During disk usage eviction, prioritized evicting covered layers above
all other layers.


Caveats:
- Using the period as the threshold for time based eviction in this case
is a bit of a hack, but it avoids adding yet another configuration
property, and in any case the value of a new property would be somewhat
arbitrary: there's no "right" length of time to keep covered layers
around just in case.
- We had previously planned on removing time-based eviction: this change
would motivate us to keep it around, but we can still simplify the code
later to just do the eviction of covered layers, rather than applying a
TTL policy to all layers.
2024-08-14 12:10:15 +01:00
Joonas Koivunen
485d76ac62 timeline_detach_ancestor: adjust error handling (#8528)
With additional phases from #8430 the `detach_ancestor::Error` became
untenable. Split it up into phases, and introduce laundering for
remaining `anyhow::Error` to propagate them as most often
`Error::ShuttingDown`.

Additionally, complete FIXMEs.

Cc: #6994
2024-08-14 10:16:18 +01:00