Files
neon/test_runner
Arpad Müller 0bdbc39cb1 Compaction: unify key and value reference vecs (#4888)
## Problem

PR #4839 has already reduced the number of b-tree traversals and vec
creations from 3 to 2, but as pointed out in
https://github.com/neondatabase/neon/pull/4839#discussion_r1279167815 ,
we would ideally just traverse the b-tree once during compaction.

Afer #4836, the two vecs created are one for the list of keys, lsns and
sizes, and one for the list of `(key, lsn, value reference)`. However,
they are not equal, as pointed out in
https://github.com/neondatabase/neon/pull/4839#issuecomment-1660418012
and the following comment: the key vec creation combines multiple
entries for which the lsn is changing but the key stays the same into
one, with the size being the sum of the sub-sizes. In SQL, this would
correspond to something like `SELECT key, lsn, SUM(size) FROM b_tree
GROUP BY key;` and `SELECT key, lsn, val_ref FROM b_tree;`. Therefore,
the join operation is non-trivial.

## Summary of changes

This PR merges the two lists of keys and value references into one. It's
not a trivial change and affects the size pattern of the resulting
files, which is why this is in a separate PR from #4839 .

The key vec is used in compaction for determining when to start a new
layer file. The loop uses various thresholds to come to this conclusion,
but the grouping via the key has led to the behaviour that regardless of
the threshold, it only starts a new file when either a new key is
encountered, or a new delta file.

The new code now does the combination after the merging and sorting of
the various keys from the delta files. This *mostly* does the same as
the old code, except for a detail: with the grouping done on a
per-delta-layer basis, the sorted and merged vec would still have
multiple entries for multiple delta files, but now, we don't have an
easy way to tell when a new input delta layer file is encountered, so we
cannot create multiple entries on that basis easily.

To prevent possibly infinite growth, our new grouping code compares the
combined size with the threshold, and if it is exceeded, it cuts a new
entry so that the downstream code can cut a new output file. Here, we
perform a tradeoff however, as if the threshold is too small, we risk
putting entries for the same key into multiple layer files, but if the
threshold is too big, we can in some instances exceed the target size.

Currently, we set the threshold to the target size, so in theory we
would stay below or roughly at double the `target_file_size`.

We also fix the way the size was calculated for the last key. The calculation
was wrong and accounted for the old layer's btree, even though we
already account for the overhead of the in-construction btree.

Builds on top of #4839 .
2023-08-16 18:27:18 +03:00
..
2023-07-18 12:56:40 +03:00

Neon test runner

This directory contains integration tests.

Prerequisites:

  • Correctly configured Python, see /docs/sourcetree.md
  • Neon and Postgres binaries
    • See the root README.md for build directions If you want to test tests with test-only APIs, you would need to add --features testing to Rust code build commands. For convenience, repository cargo config contains build_testing alias, that serves as a subcommand, adding the required feature flags. Usage example: cargo build_testing --release is equivalent to cargo build --features testing --release
    • Tests can be run from the git tree; or see the environment variables below to run from other directories.
  • The neon git repo, including the postgres submodule (for some tests, e.g. pg_regress)

Test Organization

Regression tests are in the 'regress' directory. They can be run in parallel to minimize total runtime. Most regression test sets up their environment with its own pageservers and safekeepers (but see TEST_SHARED_FIXTURES).

'pg_clients' contains tests for connecting with various client libraries. Each client test uses a Dockerfile that pulls an image that contains the client, and connects to PostgreSQL with it. The client tests can be run against an existing PostgreSQL or Neon installation.

'performance' contains performance regression tests. Each test exercises a particular scenario or workload, and outputs measurements. They should be run serially, to avoid the tests interfering with the performance of each other. Some performance tests set up their own Neon environment, while others can be run against an existing PostgreSQL or Neon environment.

Running the tests

There is a wrapper script to invoke pytest: ./scripts/pytest. It accepts all the arguments that are accepted by pytest. Depending on your installation options pytest might be invoked directly.

Test state (postgres data, pageserver state, and log files) will be stored under a directory test_output.

You can run all the tests with:

./scripts/pytest

If you want to run all the tests in a particular file:

./scripts/pytest test_pgbench.py

If you want to run all tests that have the string "bench" in their names:

./scripts/pytest -k bench

To run tests in parellel we utilize pytest-xdist plugin. By default everything runs single threaded. Number of workers can be specified with -n argument:

./scripts/pytest -n4

By default performance tests are excluded. To run them explicitly pass performance tests selection to the script:

./scripts/pytest test_runner/performance

Useful environment variables:

NEON_BIN: The directory where neon binaries can be found. POSTGRES_DISTRIB_DIR: The directory where postgres distribution can be found. Since pageserver supports several postgres versions, POSTGRES_DISTRIB_DIR must contain a subdirectory for each version with naming convention v{PG_VERSION}/. Inside that dir, a bin/postgres binary should be present. DEFAULT_PG_VERSION: The version of Postgres to use, This is used to construct full path to the postgres binaries. Format is 2-digit major version nubmer, i.e. DEFAULT_PG_VERSION="14". Alternatively, you can use --pg-version argument. TEST_OUTPUT: Set the directory where test state and test output files should go. TEST_SHARED_FIXTURES: Try to re-use a single pageserver for all the tests. NEON_PAGESERVER_OVERRIDES: add a ;-separated set of configs that will be passed as RUST_LOG: logging configuration to pass into Neon CLI

Useful parameters and commands:

--pageserver-config-override=${value} -c values to pass into pageserver through neon_local cli

--preserve-database-files to preserve pageserver (layer) and safekeer (segment) timeline files on disk after running a test suite. Such files might be large, so removed by default; but might be useful for debugging or creation of svg images with layer file contents.

Let stdout, stderr and INFO log messages go to the terminal instead of capturing them: ./scripts/pytest -s --log-cli-level=INFO ... (Note many tests capture subprocess outputs separately, so this may not show much.)

Exit after the first test failure: ./scripts/pytest -x ... (there are many more pytest options; run pytest -h to see them.)

Writing a test

Every test needs a Neon Environment, or NeonEnv to operate in. A Neon Environment is like a little cloud-in-a-box, and consists of a Pageserver, 0-N Safekeepers, and compute Postgres nodes. The connections between them can be configured to use JWT authentication tokens, and some other configuration options can be tweaked too.

The easiest way to get access to a Neon Environment is by using the neon_simple_env fixture. The 'simple' env may be shared across multiple tests, so don't shut down the nodes or make other destructive changes in that environment. Also don't assume that there are no tenants or branches or data in the cluster. For convenience, there is a branch called empty, though. The convention is to create a test-specific branch of that and load any test data there, instead of the 'main' branch.

For more complicated cases, you can build a custom Neon Environment, with the neon_env fixture:

def test_foobar(neon_env_builder: NeonEnvBuilder):
    # Prescribe the environment.
    # We want to have 3 safekeeper nodes, and use JWT authentication in the
    # connections to the page server
    neon_env_builder.num_safekeepers = 3
    neon_env_builder.set_pageserver_auth(True)

    # Now create the environment. This initializes the repository, and starts
    # up the page server and the safekeepers
    env = neon_env_builder.init_start()

    # Run the test
    ...

For more information about pytest fixtures, see https://docs.pytest.org/en/stable/fixture.html

At the end of a test, all the nodes in the environment are automatically stopped, so you don't need to worry about cleaning up. Logs and test data are preserved for the analysis, in a directory under ../test_output/<testname>

Before submitting a patch

Ensure that you pass all obligatory checks.

Also consider:

  • Writing a couple of docstrings to clarify the reasoning behind a new test.
  • Adding more type hints to your code to avoid Any, especially:
    • For fixture parameters, they are not automatically deduced.
    • For function arguments and return values.