When `NeonEnv.from_repo_dir` was introduced, storage controller stored
its
state exclusively `attachments.json`.
Since then, it has moved to using Postgres, which stores its state in
`storage_controller_db`.
But `NeonEnv.from_repo_dir` wasn't adjusted to do this.
This PR rectifies the situation.
Context for this is failures in
`test_pageserver_characterize_throughput_with_n_tenants`
CF:
https://neondb.slack.com/archives/C033RQ5SPDH/p1721035799502239?thread_ts=1720901332.293769&cid=C033RQ5SPDH
Notably, `from_repo_dir` is also used by the backwards- and
forwards-compatibility.
Thus, the changes in this PR affect those tests as well.
However, it turns out that the compatibility snapshot already contains
the `storage_controller_db`.
Thus, it should just work and in fact we can remove hacks like
`fixup_storage_controller`.
Follow-ups created as part of this work:
* https://github.com/neondatabase/neon/issues/8399
* https://github.com/neondatabase/neon/issues/8400