mirror of
https://github.com/GreptimeTeam/greptimedb.git
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Arrangement&types
This commit is contained in:
9
Cargo.lock
generated
9
Cargo.lock
generated
@@ -2852,7 +2852,8 @@ checksum = "56254986775e3233ffa9c4d7d3faaf6d36a2c09d30b20687e9f88bc8bafc16c8"
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[[package]]
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name = "differential-dataflow"
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version = "0.12.0"
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source = "git+https://github.com/TimelyDataflow/differential-dataflow.git#99fa67db2b92d2ee938c6ffef0912908de3ef288"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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checksum = "cecb0345111032cfd995a1e9c1b79387a0e6bf6690be5d8dd12a58f4861bc6d9"
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dependencies = [
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"abomonation",
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"abomonation_derive",
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@@ -9588,9 +9589,11 @@ checksum = "9091b6114800a5f2141aee1d1b9d6ca3592ac062dc5decb3764ec5895a47b4eb"
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name = "stream"
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version = "0.1.0"
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dependencies = [
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"abomonation",
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"abomonation_derive",
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"datafusion-expr",
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"datafusion-substrait",
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"datatypes",
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"differential-dataflow",
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"serde",
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"timely",
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]
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@@ -6,11 +6,16 @@ edition = "2021"
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# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
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[dependencies]
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timely = {version = "0.12", features=["bincode"]}
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differential-dataflow = "0.12"
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abomonation = "0.7.3"
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abomonation_derive = "0.5"
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# use version from crates.io for now to prevent version slewing
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# disable default-features which include `abomonaion` which we don't need for IPC
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# timely = {version = "0.12.0", default-features = false, features = ["bincode"]}
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# differential-dataflow = "0.12.0"
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timely = "0.12.0"
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differential-dataflow = "0.12.0"
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# TODO: fork later for fixed version git dependency
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# timely = { git = "https://github.com/TimelyDataflow/timely-dataflow", default-features = false }
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# differential-dataflow = { git = "https://github.com/TimelyDataflow/differential-dataflow", rev ="99fa67db"}
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datafusion-expr.workspace = true
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datafusion-substrait.workspace = true
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serde = {version = "1.0", features = ["derive"]}
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datatypes = { path = "../datatypes" }
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serde = { version = "1.0", features = ["derive"] }
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datatypes = { path = "../datatypes" }
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@@ -1 +1,3 @@
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//! for getting data from source and sending results to sink
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//! and communicating with other parts of the database
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//! also commands storage and computation layer
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@@ -1,15 +1,59 @@
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use std::marker::PhantomData;
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use std::collections::BTreeMap;
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use differential_dataflow::lattice::Lattice;
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use differential_dataflow::Collection;
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use serde::{Deserialize, Serialize};
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use timely::dataflow::Scope;
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use differential_dataflow::operators::arrange::Arranged;
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use differential_dataflow::trace::wrappers::enter::TraceEnter;
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use differential_dataflow::trace::wrappers::frontier::TraceFrontier;
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use differential_dataflow::{Collection, Data};
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use timely::dataflow::{Scope, ScopeParent};
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use timely::progress::timestamp::Refines;
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use timely::progress::{Antichain, Timestamp};
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use timely::Data;
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use crate::Diff;
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pub struct Context<S, T>
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use crate::compute::typedefs::{TraceErrHandle, TraceRowHandle};
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use crate::expr::{GlobalId, Id, ScalarExpr};
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use crate::repr;
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use crate::repr::Diff;
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use crate::storage::errors::DataflowError;
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// Local type definition to avoid the horror in signatures.
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pub(crate) type KeyArrangement<S, K, V> =
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Arranged<S, TraceRowHandle<K, V, <S as ScopeParent>::Timestamp, Diff>>;
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pub(crate) type Arrangement<S, V> = KeyArrangement<S, V, V>;
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pub(crate) type ErrArrangement<S> =
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Arranged<S, TraceErrHandle<DataflowError, <S as ScopeParent>::Timestamp, Diff>>;
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pub(crate) type ArrangementImport<S, V, T> = Arranged<
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S,
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TraceEnter<TraceFrontier<TraceRowHandle<V, V, T, Diff>>, <S as ScopeParent>::Timestamp>,
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>;
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pub(crate) type ErrArrangementImport<S, T> = Arranged<
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S,
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TraceEnter<
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TraceFrontier<TraceErrHandle<DataflowError, T, Diff>>,
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<S as ScopeParent>::Timestamp,
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>,
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>;
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/// Describes flavor of arrangement: local or imported trace.
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#[derive(Clone)]
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pub enum ArrangementFlavor<S: Scope, V: Data, T = repr::Timestamp>
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where
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T: Timestamp + Lattice,
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S::Timestamp: Lattice + Refines<T>,
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{
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/// A dataflow-local arrangement.
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Local(Arrangement<S, V>, ErrArrangement<S>),
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/// An imported trace from outside the dataflow.
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///
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/// The `GlobalId` identifier exists so that exports of this same trace
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/// can refer back to and depend on the original instance.
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Trace(
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GlobalId,
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ArrangementImport<S, V, T>,
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ErrArrangementImport<S, T>,
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),
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}
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pub struct Context<S, V: Data, T = repr::Timestamp>
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where
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T: Timestamp + Lattice,
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S: Scope,
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@@ -30,26 +74,35 @@ where
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pub since_frontier: Antichain<T>,
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/// Frontier after which updates should not be emitted.
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/// Used to limit the amount of work done when appropriate.
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pub upper_frontier: Antichain<T>,
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pub until_frontier: Antichain<T>,
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/// Bindings of identifiers to collections.
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pub bindings: BTreeMap<Id, CollectionBundle<S, V, T>>,
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}
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impl<S: Scope, V: Data> Context<S, V>
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where
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S::Timestamp: Lattice + Refines<repr::Timestamp>,
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{
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/// TODO" DataflowDesc & Plan & etc.
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pub fn for_dataflow_in(scope: S) -> Self {
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let dataflow_id = scope.addr()[0];
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// TODO(discord9): get since_frontier and until_frontier from dataflow_desc
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todo!()
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}
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}
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#[derive(Clone)]
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pub struct CollectionBundle<S: Scope, V: Data, T>
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pub struct CollectionBundle<S, V, T = repr::Timestamp>
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where
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T: Timestamp + Lattice,
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S: Scope,
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S::Timestamp: Lattice + Refines<T>,
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V: Data,
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{
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pub(crate) collection: Collection<S, V, Diff>,
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/// TODO: impl arranged in memory
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pub(crate) arranged: PhantomData<T>,
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/// TODO: impl: 1. ScalarExpr(Could be from substrait), 2. Arrangement
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pub(crate) arranged: BTreeMap<Vec<ScalarExpr>, ArrangementFlavor<S, V, T>>,
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}
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#[derive(Ord, PartialOrd, Clone, Debug, Eq, Deserialize, Serialize, PartialEq, Hash)]
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pub enum DataflowError {
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EvalError(EvalError),
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}
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#[derive(Ord, PartialOrd, Clone, Debug, Eq, Deserialize, Serialize, PartialEq, Hash)]
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pub enum EvalError {
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DivisionByZero,
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}
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#[derive(Clone)]
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pub enum ArrangementFlavored {}
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@@ -1,4 +1,5 @@
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//! for generate dataflow from logical plan and computing the dataflow
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mod context;
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use datafusion_expr::LogicalPlan as DfLogicalPlan;
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use datafusion_substrait::logical_plan::producer::to_substrait_plan;
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mod plan;
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mod typedefs;
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mod types;
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83
src/flow/src/compute/plan/mod.rs
Normal file
83
src/flow/src/compute/plan/mod.rs
Normal file
@@ -0,0 +1,83 @@
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use std::collections::BTreeMap;
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use serde::{Deserialize, Serialize};
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use crate::expr::{Id, ScalarExpr};
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use crate::repr::{self, Row};
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use crate::storage::errors::EvalError;
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/// The forms in which an operator's output is available;
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/// it can be considered the plan-time equivalent of
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/// `render::context::CollectionBundle`.
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///
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/// These forms are either "raw", representing an unarranged collection,
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/// or "arranged", representing one that has been arranged by some key.
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///
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/// The raw collection, if it exists, may be consumed directly.
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///
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/// The arranged collections are slightly more complicated:
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/// Each key here is attached to a description of how the corresponding
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/// arrangement is permuted to remove value columns
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/// that are redundant with key columns. Thus, the first element in each
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/// tuple of `arranged` is the arrangement key; the second is the map of
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/// logical output columns to columns in the key or value of the deduplicated
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/// representation, and the third is a "thinning expression",
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/// or list of columns to include in the value
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/// when arranging.
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///
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/// For example, assume a 5-column collection is to be arranged by the key
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/// `[Column(2), Column(0) + Column(3), Column(1)]`.
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/// Then `Column(1)` and `Column(2)` in the value are redundant with the key, and
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/// only columns 0, 3, and 4 need to be stored separately.
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/// The thinning expression will then be `[0, 3, 4]`.
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///
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/// The permutation represents how to recover the
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/// original values (logically `[Column(0), Column(1), Column(2), Column(3), Column(4)]`)
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/// from the key and value of the arrangement, logically
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/// `[Column(2), Column(0) + Column(3), Column(1), Column(0), Column(3), Column(4)]`.
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/// Thus, the permutation in this case should be `{0: 3, 1: 2, 2: 0, 3: 4, 4: 5}`.
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///
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/// Note that this description, while true at the time of writing, is merely illustrative;
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/// users of this struct should not rely on the exact strategy used for generating
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/// the permutations. As long as clients apply the thinning expression
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/// when creating arrangements, and permute by the hashmap when reading them,
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/// the contract of the function where they are generated (`expr::permutation_for_arrangement`)
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/// ensures that the correct values will be read.
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#[derive(Default, Clone, Debug, Deserialize, Serialize, PartialEq, Eq)]
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pub struct AvailableCollections {
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/// Whether the collection exists in unarranged form.
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pub raw: bool,
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/// The set of arrangements of the collection, along with a
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/// column permutation mapping
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pub arranged: Vec<KeyWithColumnPermutation>,
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}
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pub type KeyWithColumnPermutation = (Vec<ScalarExpr>, BTreeMap<usize, usize>, Vec<usize>);
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impl AvailableCollections {
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/// Represent a collection that has no arrangements.
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pub fn new_raw() -> Self {
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Self {
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raw: true,
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arranged: vec![],
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}
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}
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/// Represent a collection that is arranged in the
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/// specified ways.
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pub fn new_arranged(arranged: Vec<KeyWithColumnPermutation>) -> Self {
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assert!(
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!arranged.is_empty(),
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"Invariant violated: at least one collection must exist"
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);
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Self {
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raw: false,
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arranged,
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}
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}
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}
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pub enum Plan {
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Constant { rows: Result<Vec<Row>, EvalError> },
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Get { id: Id, keys: AvailableCollections },
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}
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20
src/flow/src/compute/typedefs.rs
Normal file
20
src/flow/src/compute/typedefs.rs
Normal file
@@ -0,0 +1,20 @@
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use differential_dataflow::operators::arrange::TraceAgent;
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use differential_dataflow::trace::implementations::ord::{OrdKeySpine, OrdValSpine};
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use crate::repr::{Diff, Row, Timestamp};
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use crate::storage::errors::DataflowError;
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// TODO: consider use ColValSpine for columnation storage
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/// T: Time, R: Diff, O: Offset
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pub type RowSpine<K, V, T, R, O = usize> = OrdValSpine<K, V, T, R, O>;
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/// T: Time, R: Diff, O: Offset
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pub type RowKeySpine<K, T, R, O = usize> = OrdKeySpine<K, T, R, O>;
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/// T: Time, R: Diff, O: Offset
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pub type ErrSpine<K, T, R, O = usize> = OrdKeySpine<K, T, R, O>;
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/// T: Time, R: Diff, O: Offset
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pub type ErrValSpine<K, T, R, O = usize> = OrdValSpine<K, DataflowError, T, R, O>;
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pub type TraceRowHandle<K, V, T, R> = TraceAgent<RowSpine<K, V, T, R>>;
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pub type TraceErrHandle<K, T, R> = TraceAgent<ErrSpine<K, T, R>>;
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pub type KeysValsHandle = TraceRowHandle<Row, Row, Timestamp, Diff>;
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pub type ErrsHandle = TraceErrHandle<DataflowError, Timestamp, Diff>;
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1
src/flow/src/compute/types/mod.rs
Normal file
1
src/flow/src/compute/types/mod.rs
Normal file
@@ -0,0 +1 @@
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16
src/flow/src/expr/func.rs
Normal file
16
src/flow/src/expr/func.rs
Normal file
@@ -0,0 +1,16 @@
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use crate::repr::Row;
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/// Stateless functions
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#[derive(Debug, Clone)]
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pub enum Func {
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BuiltIn(BuiltInFunc),
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Custom(fn(Row) -> Row),
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}
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#[derive(Debug, Clone)]
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pub enum BuiltInFunc {
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Not,
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IsNull,
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IsTrue,
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IsFalse,
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}
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@@ -1,5 +1,23 @@
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//! for declare dataflow description that is the last step before build dataflow
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mod func;
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mod id;
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use datatypes::prelude::ConcreteDataType;
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use datatypes::value::Value;
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pub use id::{GlobalId, Id, LocalId};
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use serde::{Deserialize, Serialize};
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use crate::storage::errors::DataflowError;
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#[derive(Debug, Clone, Deserialize, Serialize, PartialEq, Eq)]
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pub enum ScalarExpr {
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/// A column of the input row
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Column(usize),
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/// A literal value.
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Literal(Result<Value, DataflowError>, ConcreteDataType),
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CallFunc {
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func: String,
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exprs: Vec<ScalarExpr>,
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},
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}
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@@ -1,133 +1,6 @@
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mod adapter;
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mod compute;
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mod expr;
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mod render;
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mod repr;
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mod storage;
|
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|
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/// Record count difference type.
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pub type Diff = i64;
|
||||
|
||||
#[test]
|
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fn demo_multitemporal() {
|
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use differential_dataflow::input::InputSession;
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use differential_dataflow::lattice::Lattice;
|
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use differential_dataflow::operators::{Count, Join};
|
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use serde::{Deserialize, Serialize};
|
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use timely::progress::timestamp::Refines;
|
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#[derive(Debug, Clone, Default, Eq, PartialEq, Hash, Deserialize, Serialize)]
|
||||
/// (System, Event)
|
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struct MT(usize, usize);
|
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impl Ord for MT {
|
||||
fn cmp(&self, other: &Self) -> std::cmp::Ordering {
|
||||
self.0.cmp(&other.0).then(self.1.cmp(&other.1))
|
||||
}
|
||||
}
|
||||
impl PartialOrd for MT {
|
||||
fn partial_cmp(&self, other: &Self) -> Option<std::cmp::Ordering> {
|
||||
self.cmp(other).into()
|
||||
}
|
||||
}
|
||||
impl timely::PartialOrder for MT {
|
||||
fn less_equal(&self, other: &Self) -> bool {
|
||||
self.0 <= other.0 && self.1 <= other.1
|
||||
}
|
||||
}
|
||||
impl timely::order::TotalOrder for MT {}
|
||||
impl timely::progress::Timestamp for MT {
|
||||
type Summary = MT;
|
||||
fn minimum() -> Self {
|
||||
Self(0, 0)
|
||||
}
|
||||
}
|
||||
impl timely::progress::PathSummary<MT> for MT {
|
||||
fn results_in(&self, src: &MT) -> Option<MT> {
|
||||
self.0
|
||||
.results_in(&src.0)
|
||||
.and_then(|x| self.1.results_in(&src.1).map(|y| MT(x, y)))
|
||||
//.and_then(|x| self.1.results_in(&src.1).map(|y| MT(x, y)))
|
||||
}
|
||||
|
||||
fn followed_by(&self, other: &Self) -> Option<Self> {
|
||||
self.0
|
||||
.followed_by(&other.0)
|
||||
.and_then(|x| self.1.followed_by(&other.1).map(|y| MT(x, y)))
|
||||
}
|
||||
}
|
||||
impl Refines<()> for MT {
|
||||
fn to_inner(other: ()) -> Self {
|
||||
Self(0, 0)
|
||||
}
|
||||
|
||||
fn to_outer(self) -> () {
|
||||
todo!()
|
||||
}
|
||||
|
||||
fn summarize(
|
||||
path: <Self as timely::progress::Timestamp>::Summary,
|
||||
) -> <() as timely::progress::Timestamp>::Summary {
|
||||
todo!()
|
||||
}
|
||||
}
|
||||
impl Lattice for MT {
|
||||
fn join(&self, other: &Self) -> Self {
|
||||
Self(self.0.max(other.0), self.1.max(other.1))
|
||||
}
|
||||
|
||||
fn meet(&self, other: &Self) -> Self {
|
||||
Self(self.0.min(other.0), self.1.min(other.1))
|
||||
}
|
||||
}
|
||||
|
||||
// define a new timely dataflow computation.
|
||||
timely::execute_from_args(["w2".to_string()].into_iter(), move |worker| {
|
||||
// create an input collection of data.
|
||||
let mut input = InputSession::new();
|
||||
|
||||
// define a new computation.
|
||||
let probe = worker.dataflow(|scope| {
|
||||
// create a new collection from our input.
|
||||
let manages = input.to_collection(scope);
|
||||
|
||||
// if (m2, m1) and (m1, p), then output (m1, (m2, p))
|
||||
manages
|
||||
.map(|(m2, m1)| (m1, m2))
|
||||
.join(&manages)
|
||||
.count()
|
||||
//.inspect(|x| println!("{:?}", x))
|
||||
.probe()
|
||||
});
|
||||
|
||||
// Read a size for our organization from the arguments.
|
||||
let size = 10;
|
||||
|
||||
// Load input (a binary tree).
|
||||
input.advance_to(MT(0, 0));
|
||||
let mut person = worker.index();
|
||||
while person < size {
|
||||
input.insert((person / 2, person));
|
||||
person += worker.peers();
|
||||
}
|
||||
|
||||
// wait for data loading.
|
||||
input.advance_to(MT(0, 0));
|
||||
input.flush();
|
||||
while probe.less_than(input.time()) {
|
||||
worker.step();
|
||||
}
|
||||
println!("{:?}\tdata loaded", worker.timer().elapsed());
|
||||
|
||||
let mut person = 1 + worker.index();
|
||||
while person < size {
|
||||
input.remove((person / 2, person));
|
||||
input.insert((person / 3, person));
|
||||
input.advance_to(MT(0, person));
|
||||
input.flush();
|
||||
while probe.less_than(&input.time()) {
|
||||
worker.step();
|
||||
}
|
||||
println!("{:?}\tstep {} complete", worker.timer().elapsed(), person);
|
||||
person += worker.peers();
|
||||
}
|
||||
})
|
||||
.expect("Computation terminated abnormally");
|
||||
}
|
||||
|
||||
2
src/flow/src/render/mod.rs
Normal file
2
src/flow/src/render/mod.rs
Normal file
@@ -0,0 +1,2 @@
|
||||
//! for building the flow graph from PLAN
|
||||
//! this is basically the last step before actually running the flow graph
|
||||
@@ -1,9 +1,35 @@
|
||||
//! basically a wrapper around the `datatype` crate
|
||||
//! for basic Data Representation
|
||||
use std::borrow::Borrow;
|
||||
|
||||
use datatypes::value::Value;
|
||||
|
||||
/// System-wide Record count difference type.
|
||||
pub type Diff = i64;
|
||||
|
||||
/// A row is a vector of values.
|
||||
///
|
||||
/// TODO: use a more efficient representation
|
||||
/// i.e. more compact like raw u8 of \[tag0, value0, tag1, value1, ...\]
|
||||
pub type Row = Vec<Value>;
|
||||
#[derive(Clone)]
|
||||
pub struct Row {
|
||||
/// TODO: use a more efficient representation
|
||||
///
|
||||
/// i.e. more compact like raw u8 of \[tag0, value0, tag1, value1, ...\]
|
||||
inner: Vec<Value>,
|
||||
}
|
||||
|
||||
impl Row {
|
||||
pub fn pack<I>(iter: I) -> Row
|
||||
where
|
||||
I: IntoIterator<Item = Value>,
|
||||
{
|
||||
Self {
|
||||
inner: iter.into_iter().collect(),
|
||||
}
|
||||
}
|
||||
pub fn unpack(&self) -> Vec<Value> {
|
||||
self.inner.clone()
|
||||
}
|
||||
}
|
||||
|
||||
/// System-wide default timestamp type
|
||||
pub type Timestamp = u64;
|
||||
|
||||
11
src/flow/src/storage/errors.rs
Normal file
11
src/flow/src/storage/errors.rs
Normal file
@@ -0,0 +1,11 @@
|
||||
use serde::{Deserialize, Serialize};
|
||||
|
||||
#[derive(Ord, PartialOrd, Clone, Debug, Eq, Deserialize, Serialize, PartialEq, Hash)]
|
||||
pub enum DataflowError {
|
||||
EvalError(EvalError),
|
||||
}
|
||||
|
||||
#[derive(Ord, PartialOrd, Clone, Debug, Eq, Deserialize, Serialize, PartialEq, Hash)]
|
||||
pub enum EvalError {
|
||||
DivisionByZero,
|
||||
}
|
||||
@@ -1 +1 @@
|
||||
|
||||
pub(crate) mod errors;
|
||||
|
||||
Reference in New Issue
Block a user