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438 Commits 106 Branches 227 Tags
7151deb4edb2fcbab56c4a72cde7266b907ee9bd
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348 Commits

Author SHA1 Message Date
Ruihang Xia
7151deb4ed Merge branch 'dev' into replace-arrow2 2022-12-05 20:10:37 +08:00
Ruihang Xia
6fb413ae50 ci: add toml format linter (#706) 
* chore: run taplo format

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* ci: add workflow to check toml

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* rerun formatter with ident to 4 spaces

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update check command

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2022-12-05 20:03:10 +08:00
Ruihang Xia
beb07fc895 feat: new datatypes subcrate based on the official arrow (#705) 
* feat: Init datatypes2 crate

* chore: Remove some unimplemented types

* feat: Implements PrimitiveType and PrimitiveVector for datatypes2 (#633)

* feat: Implement primitive types and vectors

* feat: Implement a wrapper type

* feat: Remove VectorType from ScalarRef

* feat: Move some trait bound from NativeType to WrapperType

* feat: pub use  primitive vectors and builders

* feat: Returns error in try_from when type mismatch

* feat: Impl PartialEq for some vectors

* test: Pass vector tests

* chore: Add license header

* test: Pass more vector tests

* feat: Implement some methods of vector Helper

* test: Pass more tests

* style: Fix clippy

* chore: Add license header

* feat: Remove IntoValueRef trait

* feat: Add NativeType trait bound to WrapperType::Native

* docs: Explain what is wrapper type

* chore: Fix typos

* refactor: LogicalPrimitiveType::type_name returns str

* feat: Implements DateType and DateVector (#651)

* feat: Implement DateType and DateVector

* test: Pass more value and data type tests

* chore: Address CR comments

* test: Skip list value test

* feat: datatypes2 datetime (#661)

* feat: impl DateTime type and vector

* fix: add license header

* fix: CR comments and add more tests

* fix: customized serialization for wrapper type

* feat: Implements NullType and NullVector (#658)

* feat: Implements NullType and NullVector

* chore: Address CR comment

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

* chore: Address CR comment

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

* feat: Implements StringType and StringVector (#659)

* feat: implement string vector

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* add more test and from

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix clippy

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* cover NUL

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* feat: impl datatypes2/timestamp (#686)

* feat: add timestamp datatype and vectors

* fix: cr comments and reformat code

* chore: add some tests

* feat: Implements ListType and ListVector (#681)

* feat: Implement ListType and ListVector

* test: Pass more tests

* style: Fix clippy

* chore: Fix comment

* chore: Address CR comments

* feat: impl constant vector (#680)

* feat: impl constant vector

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix tests

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* Apply suggestions from code review

Co-authored-by: Yingwen <realevenyag@gmail.com>

* rename fn names

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* remove println

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: Yingwen <realevenyag@gmail.com>

* feat: Implements Validity (#684)

* feat: Implements Validity

* chore: remove pub from sub mod in vectors

* feat: Implements schema for datatypes2 (#695)

* feat: Add is_timestamp_compatible to DataType

* feat: Implement ColumnSchema and Schema

* feat: Impl RawSchema

* chore: Remove useless codes and run more tests

* chore: Fix clippy

* feat: Impl from_arrow_time_unit and pass schema tests

* chore: add more tests for timestamp (#702)

* chore: add more tests for timestamp

* chore: add replicate test for timestamps

* feat: Implements helper methods for vectors/values (#703)

* feat: Implement helper methods for vectors/values

* chore: Address CR comments

* chore: add more test for timestamp

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: evenyag <realevenyag@gmail.com>
Co-authored-by: Lei, HUANG <6406592+v0y4g3r@users.noreply.github.com>
Co-authored-by: Lei, HUANG <mrsatangel@gmail.com>
 2022-12-05 19:59:23 +08:00
Ning Sun
4275e47bdb refactor: use updated mysql_async client (#698) 2022-12-05 11:18:32 +08:00
dennis zhuang
6720bc5f7c fix: validate create table request in mito engine (#690) 
* fix: validate create table request in mito engine

* fix: comment

* chore: remove TIMESTAMP_INDEX in system.rs
 2022-12-05 11:01:43 +08:00
shuiyisong
8232015998 fix: cargo sort in pre-commit (#689) 2022-12-02 16:19:31 +08:00
Ruihang Xia
d82a3a7d58 feat: implement most of scalar function and selection conversion in substrait (#678) 
* impl to_df_scalar_function

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* part of scalar functions

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* conjunction over filters

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* change the ser/de target to substrait::Plan

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* basic test coverage

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix typos and license header

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix clippy

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix CR comments

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* logs unsupported extension

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* Update src/common/substrait/src/df_expr.rs

Co-authored-by: Yingwen <realevenyag@gmail.com>

* address review comments

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* change format

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* replace context with with_context

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
Co-authored-by: Yingwen <realevenyag@gmail.com>
 2022-12-02 14:46:05 +08:00
Ning Sun
0599465685 feat: inject current database/schema into query context for postgres protocol (#685) 
* feat: inject current database/schema into query context

* test: avoid duplicate server setup
 2022-12-02 11:49:39 +08:00
Mofeng
13d51250ba feat: add http /health api (#676) 
* feat: add http `/health` api

* feat: add `/health` api test suit in http intergration test
 2022-12-01 19:11:58 +08:00
LFC
6127706b5b feat: support "use" stmt part 1 (#672) 
* feat: a bare sketch of session; support "use" in MySQL server; modify insertion and selection related codes in Datanode
 2022-12-01 17:05:32 +08:00
dennis zhuang
2e17e9c4b5 feat: supports s3 storage (#656) 
* feat: adds s3 object storage configuration

* feat: adds s3 integration test

* chore: use map

* fix: forgot license header

* fix: checking if bucket is empty in test_on

* chore: address CR issues

* refactor: run s3 test with dotenv

* chore: randomize grpc port for test

* fix: README in tests-integration

* chore: remove redundant comments
 2022-12-01 10:59:14 +08:00
Dongxu Wang
6d24f7ebb6 refactor: bump axum 0.6, use recommended way to nest routes (#668) 2022-11-30 20:04:33 +08:00
SSebo
68c2de8e45 feat: mysql and pg server support tls (#641) 
* feat: mysql and pg server support tls

* chore: replace opensrv-mysql to original

* chore: TlsOption is required but supply default value

* feat: mysql server support force tls

* chore: move TlsOption to servers

* test: mysql server disable / prefer / required tls mode

* test: pg server disable / prefer / required tls mode

* chore: add doc and remove no used code

* chore: add TODO and restore cargo linker config
 2022-11-30 12:46:15 +08:00
Yingwen
a17dcbc511 chore: fix SequenceNotMonotonic error message (#664) 
* chore: fix SequenceNotMonotonic error message

previous sequence should greater than or equal to given sequence

* Apply suggestions from code review

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>
 2022-11-30 11:58:43 +08:00
LFC
020b9936cd fix: correctly detach spawned mysql listener task (#657) 
Co-authored-by: luofucong <luofucong@greptime.com>
 2022-11-29 18:39:18 +08:00
Ning Sun
75dcf2467b refactor: add tests-integration module (#590) 
* refactor: add integration-tests module

* Apply suggestions from code review

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

* test: move grpc module to tests-integration

* test: adapt new standalone mode

* test: improve http assertion

Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
 2022-11-29 16:28:58 +08:00
dennis zhuang
fdc73fb52f perf: cache python interpreter in TLS (#649) 
* perf: cache python interpreter when executing coprocessors

* test: speedup test_execute_script by reusing interpreter

* fix: remove comment

* chore: use get_or_insert_with instead
 2022-11-29 14:41:37 +08:00
Zheming Li
baef640fe3 feat: add --version command line option (#632) 
* add version command line option

* use concat!

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>
 2022-11-28 17:07:17 +08:00
dennis zhuang
5fddb799f7 feat: enable atomic write for file object storage (#643) 
* fix: remove opendal from catalog dependencies

* feat: enable atomic writing for fs service
 2022-11-28 16:01:32 +08:00
Dongxu Wang
f372229b18 fix: append table id to table data dir (#640) 2022-11-28 10:53:13 +08:00
Xuanwo
4085fc7899 chore: Bump OpenDAL to v0.21.1 (#639) 
* deps: Bump OpenDAL to v0.21.1

Signed-off-by: Xuanwo <github@xuanwo.io>

* Avoid using raw types when not needed

Signed-off-by: Xuanwo <github@xuanwo.io>

Signed-off-by: Xuanwo <github@xuanwo.io>
 2022-11-27 10:18:39 +08:00
Ruihang Xia
30940e692a feat: impl DROP TABLE on memory catalog based standalone mode (#630) 
* feat: implement drop table for standalone mode

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* update integration test

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* enhancement test

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2022-11-25 11:53:46 +08:00
Mike Yang
b371ce0f48 test: added tests for statements methods (#622) 
* test: added tests for parse_column_default_constraint

* test: added test for sql_column_def_to_grpc_column_def

* refactor: remove hardcode in test
 2022-11-25 11:35:06 +08:00
Lei, HUANG
ac7f52d303 fix: start datanode instance before frontend services (#634) 2022-11-25 11:25:57 +08:00
fys
c5b0d2431f feat: remove InsertBatch in gRPC message (#570) 2022-11-24 14:04:48 +08:00
Lei, HUANG
4038dd4067 fix: add concurrency control for catalog manager (#619) 2022-11-24 11:10:33 +08:00
Dongxu Wang
8be0f05570 chore: able to config axum timeout in toml (#624) 2022-11-24 11:09:21 +08:00
Ruihang Xia
7b37e99a45 feat: deregister table for MemoryCatalogManager (#620) 
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2022-11-24 09:36:27 +08:00
dennis zhuang
c09775d17f feat: adds metrics, tracing and retry layer to object-store (#621) 2022-11-23 11:40:03 +08:00
Francis Du
4a9cf49637 feat: support explain syntax (#546) 2022-11-22 21:22:32 +08:00
Lei, HUANG
c144a1b20e feat: impl alter table in distributed mode (#572) 2022-11-22 15:17:25 +08:00
Ruihang Xia
d0686f9c19 Merge branch 'replace-arrow2' of github.com:GreptimeTeam/greptimedb into replace-arrow2 2022-11-21 17:43:40 +08:00
Ruihang Xia
221f3e9d2e Merge branch 'dev' into replace-arrow2 2022-11-21 17:42:15 +08:00
Yingwen
0791c65149 refactor: replace some usage of MutableBitmap by BitVec (#610) 2022-11-21 17:36:53 +08:00
evenyag
61c4a3691a chore: update dep of binary vector 2022-11-21 15:55:07 +08:00
evenyag
d7626fd6af feat: arrow_array switch to arrow 2022-11-21 15:39:41 +08:00
LFC
62fcb54258 fix: correctly open table when distributed datanode restart (#576) 
Co-authored-by: luofucong <luofucong@greptime.com>
 2022-11-21 15:15:14 +08:00
Ruihang Xia
e3201a4705 chore: replace one last datafusion dep 
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2022-11-21 14:29:59 +08:00
Ruihang Xia
571a84d91b chore: kick off. change datafusion/arrow/parquet to target version 
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2022-11-21 14:19:39 +08:00
Lei, HUANG
2b6b979d5a fix: remove datanode mysql options in standalone mode (#595) 2022-11-21 14:15:47 +08:00
Dongxu Wang
b6fa316c65 chore: correct typos (#589) (#592) 2022-11-21 14:07:45 +08:00
Lei, HUANG
ca5734edb3 feat: disable mysql server on datande when running standalone mode (#593) 2022-11-21 12:12:26 +08:00
Mike Yang
5428ad364e fix: make nullable as default when alter table (#591) 2022-11-21 12:11:19 +08:00
Ruihang Xia
f465040acc feat: lazy evaluated record batch stream (#573) 
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
 2022-11-18 21:42:10 +08:00
Yingwen
22ae983280 refactor: Use re-exported arrow mod from datatypes crate (#571) 2022-11-18 18:38:07 +08:00
Igor Morozov
e1f326295f feat: implement DESCRIBE TABLE (#558) 
Also need to support describe table in other catalog/schema
 2022-11-18 16:34:00 +08:00
aievl
6d762aa9dc feat: update mysql default listen port to 4406 (#568) 
Co-authored-by: zhaozhenhang <zhaozhenhang@kuaishou.com>
 2022-11-18 14:55:11 +08:00
Xuanwo
1f0b39cc8d chore: Bump OpenDAL to v0.20 (#569) 
Signed-off-by: Xuanwo <github@xuanwo.io>
 2022-11-18 14:17:38 +08:00
dennis zhuang
f8788273d5 feat: drop column for alter table (#562) 
* feat: drop column for alter table

* refactor: rename RemoveColumns to DropColumns

* test: alter table

* chore: error msg

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

* fix: test_parse_alter_drop_column

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>
 2022-11-17 23:00:16 +08:00
LFC
e7b4d2b9cd feat: Implement table_info() for DistTable (#536) (#557) 
* feat: Implement `table_info()`` for `DistTable` (#536)

* Update src/catalog/src/error.rs

Co-authored-by: Yingwen <1405012107@qq.com>

Co-authored-by: luofucong <luofucong@greptime.com>
Co-authored-by: Yingwen <1405012107@qq.com>
 2022-11-17 18:40:58 +08:00