Commit Graph

264 Commits

Author SHA1 Message Date
Ning Sun
a5a50c7afb test: add todo for a test to be fixed later 2022-10-29 17:39:30 +08:00
Ning Sun
1a37f74f64 test: add test for recordbatch to json serialization 2022-10-29 14:23:05 +08:00
Ning Sun
945b685556 refactor: get schema from stream 2022-10-29 13:48:01 +08:00
Ning Sun
db2cb63267 refactor: make prometheus http apis compatible with recent changes 2022-10-28 23:15:58 +08:00
Ning Sun
54485863b2 test: update integration tests for new api output 2022-10-28 19:41:49 +08:00
Ning Sun
f7d680c61e fix: address review comments 2022-10-28 19:41:49 +08:00
Ning Sun
44e16891b6 Update src/servers/src/http.rs
Co-authored-by: LFC <bayinamine@gmail.com>
2022-10-28 19:41:49 +08:00
Ning Sun
eb5f468d09 Update src/servers/src/http.rs
Co-authored-by: LFC <bayinamine@gmail.com>
2022-10-28 19:41:49 +08:00
Ning Sun
df5df3ed1d feat: add redoc UI support 2022-10-28 19:41:48 +08:00
Ning Sun
fc771e4d57 refactor: use arc wrapped api 2022-10-28 19:41:48 +08:00
Ning Sun
5daafb26ee refactor: use struct to represent query so we can doc it via aide 2022-10-28 19:41:48 +08:00
Ning Sun
22277bbfab feat: add docs for sql interface response 2022-10-28 19:41:48 +08:00
Ning Sun
3f2374bfca feat: add information to our openapi docs 2022-10-28 19:41:48 +08:00
Ning Sun
289778f601 refactor: removed HttpResponse completely 2022-10-28 19:41:46 +08:00
Ning Sun
a2c0040ea5 refactor: rename rows to records 2022-10-28 19:41:07 +08:00
Ning Sun
336ecada64 test: correct test against new handler apis 2022-10-28 19:41:07 +08:00
Ning Sun
49263bcb2e feat: update our http api and attempt to add openapi spec support 2022-10-28 19:41:05 +08:00
Ning Sun
c4e9931d31 feat: allow http post for our sql http api 2022-10-28 19:38:53 +08:00
dennis zhuang
0604eb7509 feat: prometheus remote write and read (#346)
* feat: scaffold for prometheus protocol handler

* feat: impl remote write and read for prometheus

* chore: make label matchers working in remote reading

* chore: case senstive regexp matching for labers and tweak restful api

* test: prometheus test

* test: adds test for prometheus handler and http server

* fix: typo in comment

* refactor: move snappy_compress and snappy_decompress

* fix: by code review

* fix: collect_timeseries_ids

* fix: timestamp and value column's value may be null
2022-10-28 18:47:16 +08:00
Lei, Huang
81716d622e feat: timestamp column support i64 (#325)
* feat: align_bucket support i64 and timestamp values

* feat: add Int64 to timestamp

* feat: support query i64 timestamp vector

* test: fix failling tests

* refactor: simplify some code

* fix: CR comments and add insert and query test for i64 timestamp column
2022-10-28 18:39:11 +08:00
Ruihang Xia
3e8d9b421c chore: set CI timeout (#358)
Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
2022-10-28 11:01:12 +08:00
fys
6d4c0ad5a3 feat: add writespliter (#345)
* Add writespliter

* Partition_rule use reference, not Arc
2022-10-27 10:57:34 +08:00
Jiachun Feng
00966cad69 feat: meta refactor (#339)
* feat: heartbeat handler

* chore: heartbeat handlers lock refactor

* chore: store rpc req/res wrapper

* chore: router rpc/res wrapper

* chore: const method(request_header)

* chore: rm unnessary const fn & refactor HeartbeatHandler

* chore: refactor CreateRequest

* chore: HeartbeatAccumulator

* chore: improve router req/res convert

* fix: register race condition
2022-10-26 11:26:40 +08:00
Lei, Huang
932b30d299 refactor: catalog crate (#331)
* chore: refactor dir for local catalog manager

* refactor: CatalogProvider returns Result

* refactor: SchemaProvider returns Result

* feat: add kv operations to remote catalog

* chore: refactor some code

* feat: impl catalog initialization

* feat: add register table and register system table function

* refactor: add table_info method for Table trait

* chore: add some tests

* chore: add register schema test

* chore: fix build issue after rebase onto develop

* refactor: mock to separate file

* build: failed to compile

* fix: use a container struct to bridge KvBackend and Accessor trait

* feat: upgrade opendal to 0.17

* test: add more tests

* chore: add catalog name and schema name to table info

* chore: add catalog name and schema name to table info

* chore: rebase onto develop

* refactor: common-catalog crate

* refactor: remove remote catalog related files

* fix: compilation

* feat: add table version to TableKey

* feat: add node id to TableValue

* fix: some CR comments

* chore: change async fn create_expr_to_request to sync

* fix: add backtrace to errors

* fix: code style

* fix: CatalogManager::table also requires both catalog_name and schema_name

* chore: merge develop
2022-10-26 10:50:39 +08:00
Ruihang Xia
7fe39e9187 feat: support quering with logical plan in gRPC layer (#344)
* impl logical exec & example

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* test on upper api

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* add todo to prost dep

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* sign the TODO

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
2022-10-25 16:05:53 +08:00
LFC
2ca667cbdf refactor: make table scan return physical plan (#326)
* refactor: return PhysicalPlan in Table trait's scan method, to support partitioned execution in Frontend's distribute read

* refactor: pub use necessary DataFusion types

* refactor: replace old "PhysicalPlan" and its adapters

Co-authored-by: luofucong <luofucong@greptime.com>
Co-authored-by: Yingwen <realevenyag@gmail.com>
2022-10-25 11:34:53 +08:00
Yingwen
64dac51e83 feat: Holds ColumnMetadata in StoreSchema (#333)
* chore: Update StoreSchema comment

* feat: Add metadata to ColumnSchema

* feat: Impl conversion between ColumnMetadata and ColumnSchema

We could use this feature to store the ColumnMetadata as arrow's
Schema, since the ColumnSchema could be further converted to an arrow
schema. Then we could use ColumnMetadata in StoreSchema, which contains
more information, especially the column id.

* feat(storage): Merge schema::Error to metadata::Error

To avoid cyclic dependency of two Errors

* feat(storage): Store ColumnMetadata in StoreSchema

* feat(storage): Use StoreSchemaRef to avoid cloning the whole StoreSchema struct

* test(storage): Fix test_store_schema

* feat(datatypes): Return error on duplicate meta key

* chore: Address CR comments
2022-10-25 11:06:22 +08:00
xiaomin tang
edad6f89b5 docs: Add code_of_conduct adapted from the Contributor Covenant (#340) 2022-10-24 19:04:55 +08:00
Ruihang Xia
8ab43b65ea feat: serialize/deserialize logical and execution plan via substrait (#317)
* fix: change Utf8Array indice type

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* refactor: remove unused sub-crate

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* feat: impl for both Logical and Execution plan

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* refactor: move test-util subcrate into table

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* test: table scan logical plan round trip

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* drop support of physical plan

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix warnings

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* rename trait fns to encode/decode

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* address review comments

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
2022-10-24 15:29:33 +08:00
Lei, Huang
6fc45e31e0 fix: put type rewrite optimizer rule at first (#337) 2022-10-24 15:05:59 +08:00
Yingwen
a457c49d99 refactor: Remove column_null_mask in MutationExtra (#314)
* refactor: Remove column_null_mask in MutationExtra

MutationExtra::column_null_mask is no longer needed as we could ensure
there is no missing column in WriteBatch.

* feat(storage): Remove MutationExtra

Just stores MutationType in the WalHeader, no longer needs MutationExtra
2022-10-24 14:53:35 +08:00
Jiachun Feng
b650656ae3 chore: refactor meta protocol (#332)
* chore: refactor channel_config

* chore: refactor grpc protocol

* feat: heartbeat streams
2022-10-21 20:30:57 +08:00
Ruihang Xia
bc9a2df9bf refactor: move test-util subcrate into table (#334)
* refactor: move test-util subcrate into table

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* chore: clean comment

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* move MockTableEngine into test-util

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
2022-10-21 14:39:40 +08:00
LFC
6b0c5281d4 feat: try from DataFusion's ScalarValue for our Value (#329)
* feat: try from DataFusion's ScalarValue for our Value

* Update src/datatypes/src/value.rs

Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>

* fix: resolve CR comments

Co-authored-by: luofucong <luofucong@greptime.com>
Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>
2022-10-20 20:22:40 +08:00
fys
fad8f442ef feat: modify proto for distribute insert (#327) 2022-10-20 12:41:15 +08:00
Lei, Huang
2d52f19662 feat: add table info (#323)
* refactor: add table_info method for Table trait

* feat: add table_info method to Table trait

* test: add more unit test

* fix: impl table_info for SystemTable

* test: fix failing test
2022-10-20 12:23:44 +08:00
LFC
d5800d0b60 feat: parse partition syntax in "create table" (#298)
* feat: parse partition syntax in "create table"

* Update src/sql/src/parsers/create_parser.rs

Co-authored-by: luofucong <luofucong@greptime.com>
Co-authored-by: Lei, Huang <6406592+v0y4g3r@users.noreply.github.com>
2022-10-20 10:43:15 +08:00
Ruihang Xia
fbea07ea83 chore: remove unused dependencies (#319)
* chore: remove unused dependences

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

* fix: recover some dev-deps

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>

Signed-off-by: Ruihang Xia <waynestxia@gmail.com>
2022-10-19 14:08:54 +08:00
Yingwen
87130adf54 docs: Move contributing parts from README to CONTRIBUTING.md (#321) 2022-10-19 14:00:31 +08:00
Yingwen
c147657275 ci: Use docs instead of doc (#322) 2022-10-19 11:56:49 +08:00
Jiachun Feng
d5b34f8917 feat: metasrv (#300)
* meta: meta api&client

* meta: heartbeat server init

* feat: kv store

* chore: grpc server

* chore: meta server bootstrap

* feat: heartbeat client

* feat: route for create table

* chore: a channel pool manager

* feat: route client

* feat: store client

* chore: meta_client example

* chore: change schema

* chore: unit test & by cr

* chore: refactor meta client

* chore: add unit test
2022-10-19 11:02:58 +08:00
Yingwen
4d08ee6fbb fix: Fix broken wal and memtable benchmarks (#320) 2022-10-19 10:54:01 +08:00
dennis zhuang
94b263c261 refactor: datanode instance (#316)
* refactor: datanode Instance

* fix: resolve todo
2022-10-19 10:51:45 +08:00
Yingwen
c6d91edb83 refactor(storage): Split schema mod into multiple sub-mods (#318) 2022-10-18 18:56:52 +08:00
Yingwen
cdf3280fcf feat: Region supports write requests with old schema (#297)
* feat: Adds ColumnDefaultConstraint::create_default_vector

ColumnDefaultConstraint::create_default_vector is ported from
MitoTable::try_get_column_default_constraint_vector.

* refactor: Replace try_get_column_default_constraint_vector by create_default_vector

* style: Remove unnecessary map_err in MitoTable::insert

* feat: Adds compat_write

For column in `dest_schema` but not in `write_batch`, this method would insert a
vector with default value to the `write_batch`. If there are columns not in
`dest_schema`, an error would be returned.

* chore: Add info log to RegionInner::alter

* feat(storage): RegionImpl::write support request with old version

* feat: Add nullable check when creating default value

* feat: Validate nullable and default value

* chore: Modify PutOperation comments

* chore: Make ColumnDescriptor::is_nullable readonly and validate name

* feat: Use CompatWrite trait to replace campat::compat_write method

Adds a CompactWrite trait to support padding columns to WriteBatch:
- The WriteBatch and PutData implements this trait
- Fix the issue that WriteBatch::schema is not updated to the
  schema after compat
- Also validate the created column when adding to PutData

The WriteBatch would also pad default value to missing columns in
PutData, so the memtable inserter don't need to manually check whether
the column is nullable and then insert a NullVector. All WriteBatch is
ensured to have all columns defined by the schema in its PutData.

* feat: Validate constraint by ColumnDefaultConstraint::validate()

The ColumnDefaultConstraint::validate() would also ensure the default
value has the same data type as the column's.

* feat: Use NullVector for null columns

* fix: Fix BinaryType returns wrong logical_type_id

* fix: Fix tests and revert NullVector for null columns

NullVector doesn't support custom logical type make it hard to
encode/decode, which also cause the arrow/protobuf codec of write batch
fail.

* fix: create_default_vector use replicate to create vector with default value

This would fix the test_codec_with_none_column_protobuf test, as we need
to downcast the vector to construct the protobuf values.

* test: add tests for column default constraints

* test: Add tests for CompatWrite trait impl

* test: Test write region with old schema

* fix(storage): Fix replay() applies metadata too early

The committed sequence of the RegionChange action is the sequence of the
last entry that use the old metadata (schema). During replay, we should
apply the new metadata after we see an entry that has sequence greater
than (not equals to) the `RegionChange::committed_sequence`

Also remove duplicate `set_committed_sequence()` call in
persist_manifest_version()

* chore: Removes some unreachable codes

Also add more comments to document codes in these files

* refactor: Refactor MitoTable::insert

Return error if we could not create a default vector for given column,
instead of ignoring the error

* chore: Fix incorrect comments

* chore: Fix typo in error message
2022-10-18 10:47:24 +08:00
Ning Sun
f243649971 refactor: Removed openssl from build requirement (#308)
* refactor:replace another axum-test-helper branch

* refactor: upgrade opendal  version

* refactor: use cursor for file buffer

* refactor:remove native-tls in mysql_async

* refactor: use async block and pipeline for newer opendal api

* chore: update Cargo.lock

* chore: update dependencies

* docs: removed openssl from build requirement

* fix: call close on pipe writer to flush reader for parquet streamer

* refactor: remove redundant return

* chore: use pinned revision for our forked mysql_async

* style: avoid wild-card import in test code

* Apply suggestions from code review

Co-authored-by: Yingwen <realevenyag@gmail.com>

* style: use chained call for builder

Co-authored-by: liangxingjian <965662709@qq.com>
Co-authored-by: Yingwen <realevenyag@gmail.com>
2022-10-17 19:29:17 +08:00
evenyag
69ba4581b7 test(servers): Fix OpenTSDB shutdown test occasionally fails (#311)
* test(servers): OpenTSDB shutdown test cover error branch

Create connection continuously to cover some branches of error handling
in OpentsdbServer

* test(servers): Add more tests for opentsdb server

Add a test to ensure we could not connect the server after shutdown and
a test to check existing connection usage after shutdown
2022-10-17 14:00:44 +08:00
evenyag
f942b53ed0 style(table-engine): Remove unnecessary TableError::from (#312)
The usage of TableError::from could be replaced by `?`, which is more
concise
2022-10-17 11:49:21 +08:00
dennis zhuang
25a16875b6 feat: create table and add new columns automatically in gRPC (#310)
* fix: readme

* feat: change Column's datatype in protobuf from optional to required

* feat: supports creating table and adding new columns automatically in gRPC, #279, #283

* fix: test

* refactor: execute_grpc_insert

* refactor: clean code and add test

* fix: test after rebasing develop branch

* test: test grpc server with different ports

* fix: typo

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

* fix: typo

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>

* chore: minor changes

* chore: build_alter_table_request

Co-authored-by: Ruihang Xia <waynestxia@gmail.com>
2022-10-17 10:34:52 +08:00
dennis zhuang
494a93c4f2 feat: manifest improvements (#303)
* feat: adds commited_sequence to RegionChange action, #281

* refactor: saving protocol action when writer version is changed

* feat: recover all region medata in manifest and replay them when replaying WAL, #282

* refactor: minor change and test recovering metadata after altering table schema

* fix: write wrong min_reader_version into manifest for region

* refactor: move up DataRow

* refactor: by CR comments

* test: assert recovered metadata

* refactor: by CR comments

* fix: comment
2022-10-13 15:43:35 +08:00