Merge remote-tracking branch 'origin/main' into gatekeeper/fix-1525-1

# Conflicts:
#	nodejs/__test__/arrow.test.ts
#	nodejs/lancedb/sanitize.ts
This commit is contained in:
Gatefixer
2026-08-08 19:39:27 +00:00
2 changed files with 290 additions and 33 deletions
+115
View File
@@ -6,7 +6,9 @@ import * as arrow17 from "apache-arrow-17";
import * as arrow18 from "apache-arrow-18";
import {
Vector as CurrentVector,
convertToTable,
tableFromIPC as currentTableFromIPC,
fromBufferToRecordBatch,
fromDataToBuffer,
fromRecordBatchToBuffer,
@@ -19,6 +21,7 @@ import {
FunctionOptions,
} from "../lancedb/embedding/embedding_function";
import { EmbeddingFunctionConfig } from "../lancedb/embedding/registry";
import { sanitizeTable } from "../lancedb/sanitize";
// biome-ignore lint/suspicious/noExplicitAny: skip
function sampleRecords(): Array<Record<string, any>> {
@@ -65,7 +68,11 @@ describe.each([arrow15, arrow16, arrow17, arrow18])(
tableFromIPC,
DataType,
Dictionary,
RecordBatch: ArrowRecordBatch,
Table: ArrowTable,
Uint8: ArrowUint8,
makeData: arrowMakeData,
vectorFromArray,
// biome-ignore lint/suspicious/noExplicitAny: <explanation>
} = <any>arrow;
type Schema = ApacheArrow["Schema"];
@@ -1070,6 +1077,114 @@ describe.each([arrow15, arrow16, arrow17, arrow18])(
expect(actual.getChild("text")?.toJSON()).toEqual(["foo", "bar"]);
});
it("preserves a dictionary shared by multiple fields", async function () {
const values = ["alpha", "beta", "alpha"];
const dictionaryVector = vectorFromArray(values);
const batch = new ArrowRecordBatch({
first: dictionaryVector.data[0],
second: dictionaryVector.data[0],
});
const table = new ArrowTable([batch]);
const sanitized = sanitizeTable(table);
expect([...sanitized.getChild("first")!]).toEqual(values);
expect([...sanitized.getChild("second")!]).toEqual(values);
const firstType = sanitized.schema.fields[0].type as {
dictionary: unknown;
};
const secondType = sanitized.schema.fields[1].type as {
dictionary: unknown;
};
expect(secondType.dictionary).toBe(firstType.dictionary);
expect(sanitized.batches[0].data.children[1].dictionary).toBe(
sanitized.batches[0].data.children[0].dictionary,
);
const buf = await fromDataToBuffer(table);
const actual = currentTableFromIPC(buf);
expect([...actual.getChild("first")!]).toEqual(values);
expect([...actual.getChild("second")!]).toEqual(values);
});
it("preserves shared dictionary data from another Arrow version", async function () {
const values = ["alpha", "beta", "alpha"];
const dictionaryVector = vectorFromArray(values);
const firstBatch = new ArrowRecordBatch({
label: dictionaryVector.slice(0, 2).data[0],
});
const secondBatch = new ArrowRecordBatch({
label: dictionaryVector.slice(2).data[0],
});
const table = new ArrowTable([firstBatch, secondBatch]);
const sanitized = sanitizeTable(table);
expect([...sanitized.getChild("label")!]).toEqual(values);
const dictionaries = sanitized.batches.map(
(batch) => batch.data.children[0].dictionary,
);
expect(dictionaries[0]).toBeInstanceOf(CurrentVector);
expect(dictionaries[1]).toBe(dictionaries[0]);
const buf = await fromDataToBuffer(table);
const actual = currentTableFromIPC(buf);
expect([...actual.getChild("label")!]).toEqual(values);
});
it("preserves shared chunks in growing dictionaries", async function () {
const type = new Dictionary(new Utf8(), new Int32(), 42, false);
const firstDictionary = vectorFromArray(["alpha", "beta"], new Utf8());
const secondDictionary = firstDictionary.concat(
vectorFromArray(["gamma"], new Utf8()),
);
const firstData = arrowMakeData({
type,
data: Int32Array.from([0, 1]),
dictionary: firstDictionary,
});
const secondData = arrowMakeData({
type,
data: Int32Array.from([2]),
dictionary: secondDictionary,
});
const table = new ArrowTable([
new ArrowRecordBatch({ label: firstData }),
new ArrowRecordBatch({ label: secondData }),
]);
const sanitized = sanitizeTable(table);
const expected = ["alpha", "beta", "gamma"];
expect([...sanitized.getChild("label")!]).toEqual(expected);
const firstLocalDictionary =
sanitized.batches[0].data.children[0].dictionary!;
const secondLocalDictionary =
sanitized.batches[1].data.children[0].dictionary!;
expect(secondLocalDictionary.data[0]).toBe(
firstLocalDictionary.data[0],
);
const buf = await fromTableToBuffer(sanitized);
const actual = currentTableFromIPC(buf);
expect([...actual.getChild("label")!]).toEqual(expected);
});
it("can serialize list data from another Arrow version", async function () {
const values = [["anime", "action"], [], null];
const vector = vectorFromArray(
values,
new List(new Field("item", new Utf8(), true)),
);
const table = new ArrowTable({ tags: vector });
const buf = await fromDataToBuffer(table);
const actual = currentTableFromIPC(buf);
const actualTags = actual.getChild("tags");
expect(actualTags?.get(0)?.toJSON()).toEqual(values[0]);
expect(actualTags?.get(1)?.toJSON()).toEqual(values[1]);
expect(actualTags?.get(2)).toBeNull();
});
it("can still import data", async function () {
const schema = new arrow15.Schema([
new arrow15.Field("id", new arrow15.Int32()),
+175 -33
View File
@@ -9,7 +9,7 @@
// comes from the exact same library instance. This is not always the case
// and so we must sanitize the input to ensure that it is compatible.
import { BufferType, Data } from "apache-arrow";
import { BufferType, Data, Vector } from "apache-arrow";
import type { IntBitWidth, TKeys, TimeBitWidth } from "apache-arrow/type";
import {
Binary,
@@ -72,9 +72,22 @@ import {
Uint64,
Union,
Utf8,
Vector,
} from "./arrow";
type SanitizationContext = {
types: WeakMap<object, DataType>;
vectors: WeakMap<object, Vector>;
data: WeakMap<object, Data<DataType>>;
};
function createSanitizationContext(): SanitizationContext {
return {
types: new WeakMap(),
vectors: new WeakMap(),
data: new WeakMap(),
};
}
export function sanitizeMetadata(
metadataLike?: unknown,
): Map<string, string> | undefined {
@@ -187,6 +200,13 @@ export function sanitizeInterval(typeLike: object) {
}
export function sanitizeList(typeLike: object) {
return sanitizeListWithContext(typeLike, createSanitizationContext());
}
function sanitizeListWithContext(
typeLike: object,
context: SanitizationContext,
) {
if (!("children" in typeLike) || !Array.isArray(typeLike.children)) {
throw Error(
"Expected a List type to have an array-like `children` property",
@@ -195,19 +215,35 @@ export function sanitizeList(typeLike: object) {
if (typeLike.children.length !== 1) {
throw Error("Expected a List type to have exactly one child");
}
return new List(sanitizeField(typeLike.children[0]));
return new List(sanitizeFieldWithContext(typeLike.children[0], context));
}
export function sanitizeStruct(typeLike: object) {
return sanitizeStructWithContext(typeLike, createSanitizationContext());
}
function sanitizeStructWithContext(
typeLike: object,
context: SanitizationContext,
) {
if (!("children" in typeLike) || !Array.isArray(typeLike.children)) {
throw Error(
"Expected a Struct type to have an array-like `children` property",
);
}
return new Struct(typeLike.children.map((child) => sanitizeField(child)));
return new Struct(
typeLike.children.map((child) => sanitizeFieldWithContext(child, context)),
);
}
export function sanitizeUnion(typeLike: object) {
return sanitizeUnionWithContext(typeLike, createSanitizationContext());
}
function sanitizeUnionWithContext(
typeLike: object,
context: SanitizationContext,
) {
if (
!("typeIds" in typeLike) ||
!("mode" in typeLike) ||
@@ -227,7 +263,7 @@ export function sanitizeUnion(typeLike: object) {
typeLike.mode,
// biome-ignore lint/suspicious/noExplicitAny: skip
typeLike.typeIds as any,
typeLike.children.map((child) => sanitizeField(child)),
typeLike.children.map((child) => sanitizeFieldWithContext(child, context)),
);
}
@@ -235,6 +271,19 @@ export function sanitizeTypedUnion(
typeLike: object,
// eslint-disable-next-line @typescript-eslint/naming-convention
UnionType: typeof DenseUnion | typeof SparseUnion,
) {
return sanitizeTypedUnionWithContext(
typeLike,
UnionType,
createSanitizationContext(),
);
}
function sanitizeTypedUnionWithContext(
typeLike: object,
// eslint-disable-next-line @typescript-eslint/naming-convention
UnionType: typeof DenseUnion | typeof SparseUnion,
context: SanitizationContext,
) {
if (!("typeIds" in typeLike)) {
throw Error(
@@ -249,7 +298,7 @@ export function sanitizeTypedUnion(
return new UnionType(
typeLike.typeIds as Int32Array | number[],
typeLike.children.map((child) => sanitizeField(child)),
typeLike.children.map((child) => sanitizeFieldWithContext(child, context)),
);
}
@@ -263,6 +312,16 @@ export function sanitizeFixedSizeBinary(typeLike: object) {
}
export function sanitizeFixedSizeList(typeLike: object) {
return sanitizeFixedSizeListWithContext(
typeLike,
createSanitizationContext(),
);
}
function sanitizeFixedSizeListWithContext(
typeLike: object,
context: SanitizationContext,
) {
if (!("listSize" in typeLike) || typeof typeLike.listSize !== "number") {
throw Error("Expected a FixedSizeList type to have a `listSize` property");
}
@@ -276,11 +335,18 @@ export function sanitizeFixedSizeList(typeLike: object) {
}
return new FixedSizeList(
typeLike.listSize,
sanitizeField(typeLike.children[0]),
sanitizeFieldWithContext(typeLike.children[0], context),
);
}
export function sanitizeMap(typeLike: object) {
return sanitizeMapWithContext(typeLike, createSanitizationContext());
}
function sanitizeMapWithContext(
typeLike: object,
context: SanitizationContext,
) {
if (!("children" in typeLike) || !Array.isArray(typeLike.children)) {
throw Error(
"Expected a Map type to have an array-like `children` property",
@@ -293,7 +359,10 @@ export function sanitizeMap(typeLike: object) {
throw Error("Expected a Map type to have exactly one child");
}
return new Map_(sanitizeField(typeLike.children[0]), typeLike.keysSorted);
return new Map_(
sanitizeFieldWithContext(typeLike.children[0], context),
typeLike.keysSorted,
);
}
export function sanitizeDuration(typeLike: object) {
@@ -304,6 +373,13 @@ export function sanitizeDuration(typeLike: object) {
}
export function sanitizeDictionary(typeLike: object) {
return sanitizeDictionaryWithContext(typeLike, createSanitizationContext());
}
function sanitizeDictionaryWithContext(
typeLike: object,
context: SanitizationContext,
) {
if (!("id" in typeLike) || typeof typeLike.id !== "number") {
throw Error("Expected a Dictionary type to have an `id` property");
}
@@ -317,8 +393,8 @@ export function sanitizeDictionary(typeLike: object) {
throw Error("Expected a Dictionary type to have an `isOrdered` property");
}
return new Dictionary(
sanitizeType(typeLike.dictionary),
sanitizeType(typeLike.indices) as TKeys,
sanitizeTypeWithContext(typeLike.dictionary, context),
sanitizeTypeWithContext(typeLike.indices, context) as TKeys,
typeLike.id,
typeLike.isOrdered,
);
@@ -326,12 +402,23 @@ export function sanitizeDictionary(typeLike: object) {
// biome-ignore lint/suspicious/noExplicitAny: skip
export function sanitizeType(typeLike: unknown): DataType<any> {
return sanitizeTypeWithContext(typeLike, createSanitizationContext());
}
function sanitizeTypeWithContext(
typeLike: unknown,
context: SanitizationContext,
): DataType {
if (typeof typeLike === "string") {
return dataTypeFromName(typeLike);
}
if (typeof typeLike !== "object" || typeLike === null) {
throw Error("Expected a Type but object was null/undefined");
}
const cached = context.types.get(typeLike);
if (cached !== undefined) {
return cached;
}
if (
!("typeId" in typeLike) ||
!(
@@ -350,6 +437,16 @@ export function sanitizeType(typeLike: unknown): DataType<any> {
throw Error("Type's typeId property was not a function or number");
}
const type = sanitizeTypeById(typeLike, typeId, context);
context.types.set(typeLike, type);
return type;
}
function sanitizeTypeById(
typeLike: object,
typeId: Type,
context: SanitizationContext,
): DataType {
switch (typeId) {
case Type.NONE:
throw Error("Received a Type with a typeId of NONE");
@@ -376,21 +473,21 @@ export function sanitizeType(typeLike: unknown): DataType<any> {
case Type.Interval:
return sanitizeInterval(typeLike);
case Type.List:
return sanitizeList(typeLike);
return sanitizeListWithContext(typeLike, context);
case Type.Struct:
return sanitizeStruct(typeLike);
return sanitizeStructWithContext(typeLike, context);
case Type.Union:
return sanitizeUnion(typeLike);
return sanitizeUnionWithContext(typeLike, context);
case Type.FixedSizeBinary:
return sanitizeFixedSizeBinary(typeLike);
case Type.FixedSizeList:
return sanitizeFixedSizeList(typeLike);
return sanitizeFixedSizeListWithContext(typeLike, context);
case Type.Map:
return sanitizeMap(typeLike);
return sanitizeMapWithContext(typeLike, context);
case Type.Duration:
return sanitizeDuration(typeLike);
case Type.Dictionary:
return sanitizeDictionary(typeLike);
return sanitizeDictionaryWithContext(typeLike, context);
case Type.Int8:
return new Int8();
case Type.Int16:
@@ -434,9 +531,9 @@ export function sanitizeType(typeLike: unknown): DataType<any> {
case Type.TimestampSecond:
return sanitizeTypedTimestamp(typeLike, TimestampSecond);
case Type.DenseUnion:
return sanitizeTypedUnion(typeLike, DenseUnion);
return sanitizeTypedUnionWithContext(typeLike, DenseUnion, context);
case Type.SparseUnion:
return sanitizeTypedUnion(typeLike, SparseUnion);
return sanitizeTypedUnionWithContext(typeLike, SparseUnion, context);
case Type.IntervalDayTime:
return new IntervalDayTime();
case Type.IntervalYearMonth:
@@ -455,6 +552,13 @@ export function sanitizeType(typeLike: unknown): DataType<any> {
}
export function sanitizeField(fieldLike: unknown): Field {
return sanitizeFieldWithContext(fieldLike, createSanitizationContext());
}
function sanitizeFieldWithContext(
fieldLike: unknown,
context: SanitizationContext,
): Field {
if (fieldLike instanceof Field) {
return fieldLike;
}
@@ -472,7 +576,7 @@ export function sanitizeField(fieldLike: unknown): Field {
}
let type: DataType;
try {
type = sanitizeType(fieldLike.type);
type = sanitizeTypeWithContext(fieldLike.type, context);
} catch (error: unknown) {
throw Error(
`Unable to sanitize type for field: ${fieldLike.name} due to error: ${error}`,
@@ -502,6 +606,13 @@ export function sanitizeField(fieldLike: unknown): Field {
* than lancedb is using.
*/
export function sanitizeSchema(schemaLike: SchemaLike): Schema {
return sanitizeSchemaWithContext(schemaLike, createSanitizationContext());
}
function sanitizeSchemaWithContext(
schemaLike: SchemaLike,
context: SanitizationContext,
): Schema {
if (schemaLike instanceof Schema) {
return schemaLike;
}
@@ -523,7 +634,7 @@ export function sanitizeSchema(schemaLike: SchemaLike): Schema {
);
}
const sanitizedFields = schemaLike.fields.map((field) =>
sanitizeField(field),
sanitizeFieldWithContext(field, context),
);
return new Schema(sanitizedFields, metadata);
}
@@ -545,13 +656,18 @@ export function sanitizeTable(tableLike: TableLike): Table {
"The table passed in does not appear to be a table (no 'columns' property)",
);
}
const schema = sanitizeSchema(tableLike.schema);
const batches = tableLike.batches.map(sanitizeRecordBatch);
const context = createSanitizationContext();
const schema = sanitizeSchemaWithContext(tableLike.schema, context);
const batches = tableLike.batches.map((batch) =>
sanitizeRecordBatch(batch, context),
);
return new Table(schema, batches);
}
function sanitizeRecordBatch(batchLike: RecordBatchLike): RecordBatch {
function sanitizeRecordBatch(
batchLike: RecordBatchLike,
context: SanitizationContext,
): RecordBatch {
if (batchLike instanceof RecordBatch) {
return batchLike;
}
@@ -568,19 +684,43 @@ function sanitizeRecordBatch(batchLike: RecordBatchLike): RecordBatch {
"The record batch passed in does not appear to be a record batch (no 'data' property)",
);
}
const schema = sanitizeSchema(batchLike.schema);
const data = sanitizeData(batchLike.data) as Data<Struct>;
const schema = sanitizeSchemaWithContext(batchLike.schema, context);
const data = sanitizeData(batchLike.data, context) as Data<Struct>;
return new RecordBatch(schema, data);
}
function sanitizeData(dataLike: DataLike): Data {
type DictionaryVectorLike = {
data: readonly DataLike[];
};
type DictionaryDataLike = DataLike & {
dictionary?: DictionaryVectorLike;
};
function sanitizeData(
dataLike: DataLike,
context: SanitizationContext,
): Data<DataType> {
if (dataLike instanceof Data) {
return dataLike;
}
const dictionary = dataLike.dictionary
? new Vector(dataLike.dictionary.data.map(sanitizeData))
: undefined;
return new Data(
sanitizeType(dataLike.type),
const cachedData = context.data.get(dataLike);
if (cachedData !== undefined) {
return cachedData;
}
const dictionaryLike = (dataLike as DictionaryDataLike).dictionary;
let dictionary: Vector | undefined;
if (dictionaryLike !== undefined) {
dictionary = context.vectors.get(dictionaryLike);
if (dictionary === undefined) {
dictionary = new Vector(
dictionaryLike.data.map((data) => sanitizeData(data, context)),
);
context.vectors.set(dictionaryLike, dictionary);
}
}
const data = new Data(
sanitizeTypeWithContext(dataLike.type, context),
dataLike.offset,
dataLike.length,
dataLike.nullCount,
@@ -590,9 +730,11 @@ function sanitizeData(dataLike: DataLike): Data {
[BufferType.VALIDITY]: dataLike.nullBitmap,
[BufferType.TYPE]: dataLike.typeIds,
},
dataLike.children.map(sanitizeData),
dataLike.children.map((child) => sanitizeData(child, context)),
dictionary,
);
context.data.set(dataLike, data);
return data;
}
const constructorsByTypeName = {