The new image iterator and delta iterator uses an iterator-based API.
https://github.com/neondatabase/neon/pull/8006 / part of
https://github.com/neondatabase/neon/issues/8002
This requires the underlying thing (the btree) to have an iterator API,
and the iterator should have a type name so that it can be stored
somewhere.
```rust
pub struct DeltaLayerIterator {
index_iterator: BTreeIterator
}
```
versus
```rust
pub struct DeltaLayerIterator {
index_iterator: impl Stream<....>
}
```
(this requires nightly flag and still buggy in the Rust compiler)
There are multiple ways to achieve this:
1. Either write a BTreeIterator from scratch that provides `async next`.
This is the most efficient way to do that.
2. Or wrap the current `get_stream` API, which is the current approach
in the pull request.
In the future, we should do (1), and the `get_stream` API should be
refactored to use the iterator API. With (2), we have to wrap the
`get_stream` API with `Pin<Box<dyn Stream>>`, where we have the overhead
of dynamic dispatch. However, (2) needs a rewrite of the `visit`
function, which would take some time to write and review. I'd like to
define this iterator API first and work on a real iterator API later.
## Summary of changes
Add `DiskBtreeIterator` and related tests.
Signed-off-by: Alex Chi Z <chi@neon.tech>
Part of #7497, extracts from #7996, closes#8063.
## Problem
With the LSN lease API introduced in
https://github.com/neondatabase/neon/issues/7808, we want to implement
the real lease logic so that GC will
keep all the layers needed to reconstruct all pages at all the leased
LSNs with valid leases at a given time.
Signed-off-by: Yuchen Liang <yuchen@neon.tech>
- Relation size cache was moved to extension
- the changes in visibilitymap.c and freespace.c became unnecessary
with v16, thanks to changes in upstream code
- WALProposer was moved to extension
- The hack in ReadBuffer_common to not throw an error on unexpected
data beyond EOF was removed in v16 rebase. We haven't seen such
errors, so I guess that was some early issue that was fixed long
time ago.
- The ginfast.c diff was made unnecessary by upstream commit 56b662523f
- Make safekeeper read SAFEKEEPER_AUTH_TOKEN env variable with JWT
token to connect to other safekeepers.
- Set it in neon_local when auth is enabled.
- Create simple rust http client supporting it, and use it in pull_timeline
implementation.
- Enable auth in all pull_timeline tests.
- Make sk http_client() by default generate safekeeper wide token, it makes
easier enabling auth in all tests by default.
- Add /snapshot http endpoing streaming tar archive timeline contents up to
flush_lsn.
- Add check that term doesn't change, corresponding test passes now.
- Also prepares infra to hold off WAL removal during the basebackup.
- Sprinkle fsyncs to persist the pull_timeline result.
ref https://github.com/neondatabase/neon/issues/6340
## Problem
```
ERROR synthetic_size_worker: failed to calculate synthetic size for tenant ae449af30216ac56d2c1173f894b1122: Could not find size at 0/218CA70 in timeline d8da32b5e3e0bf18cfdb560f9de29638\n')
```
e.g.
https://neon-github-public-dev.s3.amazonaws.com/reports/main/9518948590/index.html#/testresult/30a6d1e2471d2775
This test had allow lists but was disrupted by
https://github.com/neondatabase/neon/pull/8051. In that PR, I had kept
an error path in fill_logical_sizes that covered the case where we
couldn't find sizes for some of the segments, but that path could only
be hit in the case that some Timeline was shut down concurrently with a
synthetic size calculation, so it makes sense to just leave the
segment's size None in this case: the subsequent size calculations do
not assume it is Some.
## Summary of changes
- Remove `CalculateSyntheticSizeError::LsnNotFound` and just proceed in
the case where we used to return it
- Remove defunct allow list entries in `test_metric_collection`
## Summary of changes
- Stop logging HealthCheck message passing at INFO level (moved to
DEBUG)
- Stop logging /status accesses at INFO (moved to DEBUG)
- Stop logging most occurances of
`missing config file "compute_ctl_temp_override.conf"`
- Log memory usage only when the data has changed significantly, or if
we've not recently logged the data, rather than always every 2 seconds.
## Problem
We don't rebuild `build-tools` image for changes in a workflow that
builds this image itself
(`.github/workflows/build-build-tools-image.yml`) or in a workflow that
determines which tag to use
(`.github/workflows/check-build-tools-image.yml`)
## Summary of changes
- Use a hash of `Dockerfile.build-tools` and workflow files as a
persistent tag instead of using a commit sha.
## Problem
A period of unavailability for all pageservers in a cluster produced the
following fallout in staging:
all tenants became detached and required manual operation to re-attach.
Manually restarting
the storage controller re-attached all tenants due to a consistency bug.
Turns out there are two related bugs which caused the issue:
1. Pageserver re-attach can be processed before the first heartbeat.
Hence, when handling
the availability delta produced by the heartbeater,
`Node::get_availability_transition` claims
that there's no need to reconfigure the node.
2. We would still attempt to reschedule tenant shards when handling
offline transitions even
if the entire cluster is down. This puts tenant shards into a state
where the reconciler believes
they have to be detached (no pageserver shows up in their intent state).
This is doubly wrong
because we don't mark the tenant shards as detached in the database,
thus causing memory vs
database consistency issues. Luckily, this bug allowed all tenant shards
to re-attach after restart.
## Summary of changes
* For (1), abuse the fact that re-attach requests do not contain an
utilisation score and use that
to differentiate from a node that replied to heartbeats.
* For (2), introduce a special case that skips any rescheduling if the
entire cluster is unavailable.
* Update the storage controller heartbeat test with an extra scenario
where the entire cluster goes
for lunch.
Fixes https://github.com/neondatabase/neon/issues/8044
cargo test (or nextest) might rebuild the binaries with different
features/flags, so do install immediately after the build. Triggered by the
particular case of nextest invocations missing $CARGO_FEATURES, which recompiled
safekeeper without 'testing' feature which made python tests needing
it (failpoints) not run in the CI.
Also add CARGO_FEATURES to the nextest runs anyway because there doesn't seem to
be an important reason not to.
## Problem
halfvec data type was introduced in pgvector 0.7.0 and is popular
because
it allows smaller vectors, smaller indexes and potentially better
performance.
So far we have not tested halfvec in our periodic performance tests.
This PR adds halfvec indexing and halfvec queries to the test.
## Problem
I've bumped `docker/setup-buildx-action` in #8042 because I wasn't able
to reproduce the issue from #7445.
But now the issue appears again in
https://github.com/neondatabase/neon/actions/runs/9514373620/job/26226626923?pr=8059
The steps to reproduce aren't clear, it required
`docker/setup-buildx-action@v3` and rebuilding the image without cache,
probably
## Summary of changes
- Downgrade `docker/setup-buildx-action@v3`
to `docker/setup-buildx-action@v2`
## Problem
rust 1.79 new enabled by default lints
## Summary of changes
* update to rust 1.79
* `s/default_features/default-features/`
* fix proxy dead code.
* fix pageserver dead code.
## Problem
This PR refactors some error handling to avoid log spam on
tenant/timeline shutdown.
- "ignoring failure to find gc cutoffs: timeline shutting down." logs
(https://github.com/neondatabase/neon/issues/8012)
- "synthetic_size_worker: failed to calculate synthetic size for tenant
...: Failed to refresh gc_info before gathering inputs: tenant shutting
down", for example here:
https://neon-github-public-dev.s3.amazonaws.com/reports/pr-8049/9502988669/index.html#suites/3fc871d9ee8127d8501d607e03205abb/1a074a66548bbcea
Closes: https://github.com/neondatabase/neon/issues/8012
## Summary of changes
- Refactor: Add a PageReconstructError variant to GcError: this is the
only kind of error that find_gc_cutoffs can emit.
- Functional change: only ignore shutdown PageReconstructError variant:
for other variants, treat it as a real error
- Refactor: add a structured CalculateSyntheticSizeError type and use it
instead of anyhow::Error in synthetic size calculations
- Functional change: while iterating through timelines gathering logical
sizes, only drop out if the whole tenant is cancelled: individual
timeline cancellations indicate deletion in progress and we can just
ignore those.
## Problem
This test could fail with a timeout waiting for tenant deletions.
Tenant deletions could get tripped up on nodes transitioning from
offline to online at the moment of the deletion. In a previous
reconciliation, the reconciler would skip detaching a particular
location because the node was offline, but then when we do the delete
the node is marked as online and can be picked as the node to use for
issuing a deletion request. This hits the "Unexpectedly still attached
path", which would still work if the caller kept calling DELETE, but if
a caller does a Delete,get,get,get poll, then it doesn't work because
the GET calls fail after we've marked the tenant as detached.
## Summary of changes
Fix the undesirable storage controller behavior highlighted by this test
failure:
- Change tenant deletion flow to _always_ wait for reconciliation to
succeed: it was unsound to proceed and return 202 if something was still
attached, because after the 202 callers can no longer GET the tenant.
Stabilize the test:
- Add a reconcile_until_idle to the test, so that it will not have
reconciliations running in the background while we mark a node online.
This test is not meant to be a chaos test: we should test that kind of
complexity elsewhere.
- This reconcile_until_idle also fixes another failure mode where the
test might see a None for a tenant location because a reconcile was
mutating it
(https://neon-github-public-dev.s3.amazonaws.com/reports/pr-7288/9500177581/index.html#suites/8fc5d1648d2225380766afde7c428d81/4acece42ae00c442/)
It remains the case that a motivated tester could produce a situation
where a DELETE gives a 500, when precisely the wrong node transitions
from offline to available at the precise moment of a deletion (but the
500 is better than returning 202 and then failing all subsequent GETs).
Note that nodes don't go through the offline state during normal
restarts, so this is super rare. We should eventually fix this by making
DELETE to the pageserver implicitly detach the tenant if it's attached,
but that should wait until nobody is using the legacy-style deletes (the
ones that use 202 + polling)
## Problem
We have some amount of outdated action in the CI pipeline, GitHub
complains about some of them.
## Summary of changes
- Update `actions/checkout@1` (a really old one) in
`vm-compute-node-image`
- Update `actions/checkout@3` in `build-build-tools-image`
- Update `docker/setup-buildx-action` in all workflows / jobs, it was
downgraded in https://github.com/neondatabase/neon/pull/7445, but it
it seems it works fine now
This failed once with `relation "test" does not exist` when trying to
run the query on the standby. It's possible that the standby is started
before the CREATE TABLE is processed in the pageserver, and the standby
opens up for queries before it has received the CREATE TABLE transaction
from the primary. To fix, wait for the standby to catch up to the
primary before starting to run the queries.
https://neon-github-public-dev.s3.amazonaws.com/reports/pr-8025/9483658488/index.html
## Problem
Some code paths during secondary mode download are returning Ok() rather
than UpdateError::Cancelled. This is functionally okay, but it means
that the end of TenantDownloader::download has a sanity check that the
progress is 100% on success, and prints a "Correcting drift..." warning
if not. This warning can be emitted in a test, e.g.
https://neon-github-public-dev.s3.amazonaws.com/reports/pr-8049/9503642976/index.html#/testresult/fff1624ba6adae9e.
## Summary of changes
- In secondary download cancellation paths, use
Err(UpdateError::Cancelled) rather than Ok(), so that we drop out of the
download function and do not reach the progress sanity check.
# Problem
Suppose our vectored get starts with an inexact materialized page cache
hit ("cached lsn") that is shadowed by a newer image layer image layer.
Like so:
```
<inmemory layers>
+-+ < delta layer
| |
-|-|----- < image layer
| |
| |
-|-|----- < cached lsn for requested key
+_+
```
The correct visitation order is
1. inmemory layers
2. delta layer records in LSN range `[image_layer.lsn,
oldest_inmemory_layer.lsn_range.start)`
3. image layer
However, the vectored get code, when it visits the delta layer, it
(incorrectly!) returns with state `Complete`.
The reason why it returns is that it calls `on_lsn_advanced` with
`self.lsn_range.start`, i.e., the layer's LSN range.
Instead, it should use `lsn_range.start`, i.e., the LSN range from the
correct visitation order listed above.
# Solution
Use `lsn_range.start` instead of `self.lsn_range.start`.
# Refs
discovered by & fixes https://github.com/neondatabase/neon/issues/6967
Co-authored-by: Vlad Lazar <vlad@neon.tech>
https://github.com/neondatabase/neon/issues/8002
We need mock WAL record to make it easier to write unit tests. This pull
request adds such a record. It has `clear` flag and `append` field. The
tests for legacy-enhanced compaction are not modified yet and will be
part of the next pull request.
---------
Signed-off-by: Alex Chi Z <chi@neon.tech>
If a standby is started right after switching to a new WAL segment, the
request in the SLRU download request would point to the beginning of the
segment (e.g. 0/5000000), while the not-modified-since LSN would point
to just after the page header (e.g. 0/5000028). It's effectively the
same position, as there cannot be any WAL records in between, but the
pageserver rightly errors out on any request where the request LSN <
not-modified since LSN.
To fix, round down the not-modified since LSN to the beginning of the
page like the request LSN.
Fixes issue #8030
Some test cases add random keys into the timeline, but it is not part of
the `collect_keyspace`, this will cause compaction remove the keys.
The pull request adds a field to supply extra keyspaces during unit
tests.
---------
Signed-off-by: Alex Chi Z <chi@neon.tech>
## Problem
Testcase page bench test_pageserver_max_throughput_getpage_at_latest_lsn
had been deactivated because it was flaky.
We now ignore copy fail error messages like in
270d3be507/test_runner/regress/test_pageserver_getpage_throttle.py (L17-L20)
and want to reactivate it to see it it is still flaky
## Summary of changes
- reactivate the test in CI
- ignore CopyFail error message during page bench test cases
## Checklist before requesting a review
- [ ] I have performed a self-review of my code.
- [ ] If it is a core feature, I have added thorough tests.
- [ ] Do we need to implement analytics? if so did you add the relevant
metrics to the dashboard?
- [ ] If this PR requires public announcement, mark it with
/release-notes label and add several sentences in this section.
## Checklist before merging
- [ ] Do not forget to reformat commit message to not include the above
checklist
## Problem
The previous code would attempt to drain to unavailable or unschedulable
nodes.
## Summary of Changes
Remove such nodes from the list of nodes to fill.
## Problem
The merging of #7818 caused the problem with the docker-compose file.
Running docker compose is now impossible due to the unavailability of
the neon-test-extensions:latest image
## Summary of changes
Fix the problem:
Add the latest tag to the neon-test-extensions image and use the
profiles feature of the docker-compose file to avoid loading the
neon-test-extensions container if it is not needed.
- Fix the dockerhub URLs
- `neondatabase/compute-node` image has been replaced with Postgres
version specific images like `neondatabase/compute-node-v16`
- Use TAG=latest in the example, rather than some old tag. That's a
sensible default for people to copy-past
- For convenience, use a Postgres connection URL in the `psql` example
that also includes the password. That way, there's no need to set up
.pgpass
- Update the image names in `docker ps` example to match what you get
when you follow the example
- Split the first and second parts of the test to two separate tests
- In the first test, disable the aggressive GC, compaction, and
autovacuum. They are only needed by the second test. I'd like to get the
first test to a point that the VM page is never all-zeros. Disabling
autovacuum in the first test is hopefully enough to accomplish that.
- Compare the full page images, don't skip page header. After fixing the
previous point, there should be no discrepancy. LSN still won't match,
though, because of commit 387a36874c.
Fixes issue https://github.com/neondatabase/neon/issues/7984
The S3 scrubber contains "S3" in its name, but we want to make it
generic in terms of which storage is used (#7547). Therefore, rename it
to "storage scrubber", following the naming scheme of already existing
components "storage broker" and "storage controller".
Part of #7547
