Commit Graph

1368 Commits

Author SHA1 Message Date
Shany Pozin
d748615c1f RemoteTimelineClient::delete_all() to use s3::delete_objects (#4461)
## Problem
[#4325](https://github.com/neondatabase/neon/issues/4325)
## Summary of changes
Use delete_objects() method
2023-06-27 15:01:32 +03:00
Dmitry Rodionov
681c6910c2 Straighten the spec for timeline delete (#4538)
## Problem

Lets keep 500 for unusual stuff that is not considered normal. Came up
during one of the discussions around console logs now seeing this 500's.

## Summary of changes

- Return 409 Conflict instead of 500
- Remove 200 ok status because it is not used anymore
2023-06-27 13:56:32 +03:00
Shany Pozin
a7f3f5f356 Revert "run Layer::get_value_reconstruct_data in spawn_blocking#4498" (#4569)
This reverts commit 1faf69a698.
2023-06-27 10:57:28 +03:00
Christian Schwarz
1faf69a698 run Layer::get_value_reconstruct_data in spawn_blocking (#4498)
This PR concludes the "async `Layer::get_value_reconstruct_data`"
project.

The problem we're solving is that, before this patch, we'd execute
`Layer::get_value_reconstruct_data` on the tokio executor threads.
This function is IO- and/or CPU-intensive.
The IO is using VirtualFile / std::fs; hence it's blocking.
This results in unfairness towards other tokio tasks, especially under
(disk) load.

Some context can be found at
https://github.com/neondatabase/neon/issues/4154
where I suspect (but can't prove) load spikes of logical size
calculation to
cause heavy eviction skew.

Sadly we don't have tokio runtime/scheduler metrics to quantify the
unfairness.
But generally, we know blocking the executor threads on std::fs IO is
bad.
So, let's have this change and watch out for severe perf regressions in
staging & during rollout.

## Changes

* rename `Layer::get_value_reconstruct_data` to
`Layer::get_value_reconstruct_data_blocking`
* add a new blanket impl'd `Layer::get_value_reconstruct_data`
`async_trait` method that runs `get_value_reconstruct_data_blocking`
inside `spawn_blocking`.
* The `spawn_blocking` requires `'static` lifetime of the captured
variables; hence I had to change the data flow to _move_ the
`ValueReconstructState` into and back out of get_value_reconstruct_data
instead of passing a reference. It's a small struct, so I don't expect a
big performance penalty.

## Performance

Fundamentally, the code changes cause the following performance-relevant
changes:

* Latency & allocations: each `get_value_reconstruct_data` call now
makes a short-lived allocation because `async_trait` is just sugar for
boxed futures under the hood
* Latency: `spawn_blocking` adds some latency because it needs to move
the work to a thread pool
* using `spawn_blocking` plus the existing synchronous code inside is
probably more efficient better than switching all the synchronous code
to tokio::fs because _each_ tokio::fs call does `spawn_blocking` under
the hood.
* Throughput: the `spawn_blocking` thread pool is much larger than the
async executor thread pool. Hence, as long as the disks can keep up,
which they should according to AWS specs, we will be able to deliver
higher `get_value_reconstruct_data` throughput.
* Disk IOPS utilization: we will see higher disk utilization if we get
more throughput. Not a problem because the disks in prod are currently
under-utilized, according to node_exporter metrics & the AWS specs.
* CPU utilization: at higher throughput, CPU utilization will be higher.

Slightly higher latency under regular load is acceptable given the
throughput gains and expected better fairness during disk load peaks,
such as logical size calculation peaks uncovered in #4154.


## Full Stack Of Preliminary PRs

This PR builds on top of the following preliminary PRs

1. Clean-ups
  * https://github.com/neondatabase/neon/pull/4316
  * https://github.com/neondatabase/neon/pull/4317
  * https://github.com/neondatabase/neon/pull/4318
  * https://github.com/neondatabase/neon/pull/4319
  * https://github.com/neondatabase/neon/pull/4321
* Note: these were mostly to find an alternative to #4291, which I
thought we'd need in my original plan where we would need to convert
`Tenant::timelines` into an async locking primitive (#4333). In reviews,
we walked away from that, but these cleanups were still quite useful.
2. https://github.com/neondatabase/neon/pull/4364
3. https://github.com/neondatabase/neon/pull/4472
4. https://github.com/neondatabase/neon/pull/4476
5. https://github.com/neondatabase/neon/pull/4477
6. https://github.com/neondatabase/neon/pull/4485
7. https://github.com/neondatabase/neon/pull/4441
2023-06-26 11:43:11 +02:00
Christian Schwarz
44a441080d bring back spawn_blocking for compact_level0_phase1 (#4537)
The stats for `compact_level0_phase` that I added in #4527 show the
following breakdown (24h data from prod, only looking at compactions
with > 1 L1 produced):

* 10%ish of wall-clock time spent between the two read locks
* I learned that the `DeltaLayer::iter()` and `DeltaLayer::key_iter()`
calls actually do IO, even before we call `.next()`. I suspect that is
why they take so much time between the locks.
* 80+% of wall-clock time spent writing layer files
* Lock acquisition time is irrelevant (low double-digit microseconds at
most)
* The generation of the holes holds the read lock for a relatively long
time and it's proportional to the amount of keys / IO required to
iterate over them (max: 110ms in prod; staging (nightly benchmarks):
multiple seconds).

Find below screenshots from my ad-hoc spreadsheet + some graphs.

<img width="1182" alt="image"
src="https://github.com/neondatabase/neon/assets/956573/81398b3f-6fa1-40dd-9887-46a4715d9194">

<img width="901" alt="image"
src="https://github.com/neondatabase/neon/assets/956573/e4ac0393-f2c1-4187-a5e5-39a8b0c394c9">

<img width="210" alt="image"
src="https://github.com/neondatabase/neon/assets/956573/7977ade7-6aa5-4773-a0a2-f9729aecee0d">


## Changes In This PR

This PR makes the following changes:

* rearrange the `compact_level0_phase1` code such that we build the
`all_keys_iter` and `all_values_iter` later than before
* only grab the `Timeline::layers` lock once, and hold it until we've
computed the holes
* run compact_level0_phase1 in spawn_blocking, pre-grabbing the
`Timeline::layers` lock in the async code and passing it in as an
`OwnedRwLockReadGuard`.
* the code inside spawn_blocking drops this guard after computing the
holds
* the `OwnedRwLockReadGuard` requires the `Timeline::layers` to be
wrapped in an `Arc`. I think that's Ok, the locking for the RwLock is
more heavy-weight than an additional pointer indirection.
 
## Alternatives Considered

The naive alternative is to throw the entire function into
`spawn_blocking`, and use `blocking_read` for `Timeline::layers` access.

What I've done in this PR is better because, with this alternative,
1. while we `blocking_read()`, we'd waste one slot in the spawn_blocking
pool
2. there's deadlock risk because the spawn_blocking pool is a finite
resource


![image](https://github.com/neondatabase/neon/assets/956573/46c419f1-6695-467e-b315-9d1fc0949058)

## Metadata

Fixes https://github.com/neondatabase/neon/issues/4492
2023-06-26 11:42:17 +02:00
Christian Schwarz
a500bb06fb use preinitialize_metrics to initialize page cache metrics (#4557)
This is follow-up to

```
commit 2252c5c282
Author: Alex Chi Z <iskyzh@gmail.com>
Date:   Wed Jun 14 17:12:34 2023 -0400

    metrics: convert some metrics to pageserver-level (#4490)
```
2023-06-23 16:40:50 -04:00
Christian Schwarz
15456625c2 don't use MGMT_REQUEST_RUNTIME for consumption metrics synthetic size worker (#4560)
The consumption metrics synthetic size worker does logical size
calculation. Logical size calculation currently does synchronous disk
IO. This blocks the MGMT_REQUEST_RUNTIME's executor threads, starving
other futures.

While there's work on the way to move the synchronous disk IO into
spawn_blocking, the quickfix here is to use the BACKGROUND_RUNTIME
instead of MGMT_REQUEST_RUNTIME.

Actually it's not just a quickfix. We simply shouldn't be blocking
MGMT_REQUEST_RUNTIME executor threads on CPU or sync disk IO.
That work isn't done yet, as many of the mgmt tasks still _do_ disk IO.
But it's not as intensive as the logical size calculations that we're
fixing here.

While we're at it, fix disk-usage-based eviction in a similar way. It
wasn't the culprit here, according to prod logs, but it can
theoretically be a little CPU-intensive.

More context, including graphs from Prod:
https://neondb.slack.com/archives/C03F5SM1N02/p1687541681336949
2023-06-23 15:40:36 -04:00
Christian Schwarz
76718472be add pageserver-global histogram for basebackup latency (#4559)
The histogram distinguishes by ok/err.

I took the liberty to create a small abstraction for such use cases.
It helps keep the label values inside `metrics.rs`, right next
to the place where the metric and its labels are declared.
2023-06-23 16:42:12 +02:00
Alex Chi Z
a010b2108a pgserver: better template config file (#4554)
* `compaction_threshold` should be an integer, not a string.
* uncomment `[section]` so that if a user needs to modify the config,
they can simply uncomment the corresponding line. Otherwise it's easy
for us to forget uncommenting the `[section]` when uncommenting the
config item we want to configure.

Signed-off-by: Alex Chi <iskyzh@gmail.com>
2023-06-23 10:18:06 +03:00
Christian Schwarz
e4da76f021 update_gc_info: fix typo in timeline_id tracing field (#4546)
Commit

```
commit 472cc17b7a
Author: Dmitry Rodionov <dmitry@neon.tech>
Date:   Thu Jun 15 17:30:12 2023 +0300

    propagate lock guard to background deletion task (#4495)
```

did a drive-by fix, but, the drive-by had a typo.

```
gc_loop{tenant_id=2e2f2bff091b258ac22a4c4dd39bd25d}:update_gc_info{timline_id=837c688fd37c903639b9aa0a6dd3f1f1}:download_remote_layer{layer=000000000000000000000000000000000000-FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF__00000000024DA0D1-000000000443FB51}:panic{thread=background op worker location=pageserver/src/tenant/timeline.rs:4843:25}: missing extractors: ["TimelineId"]

Stack backtrace:
   0: utils::logging::tracing_panic_hook
             at /libs/utils/src/logging.rs:166:21
   1: <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/alloc/src/boxed.rs:2002:9
   2: std::panicking::rust_panic_with_hook
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/std/src/panicking.rs:692:13
   3: std::panicking::begin_panic_handler::{{closure}}
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/std/src/panicking.rs:579:13
   4: std::sys_common::backtrace::__rust_end_short_backtrace
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/std/src/sys_common/backtrace.rs:137:18
   5: rust_begin_unwind
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/std/src/panicking.rs:575:5
   6: core::panicking::panic_fmt
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/core/src/panicking.rs:64:14
   7: pageserver::tenant::timeline::debug_assert_current_span_has_tenant_and_timeline_id
             at /pageserver/src/tenant/timeline.rs:4843:25
   8: <pageserver::tenant::timeline::Timeline>::download_remote_layer::{closure#0}::{closure#0}
             at /pageserver/src/tenant/timeline.rs:4368:9
   9: <tracing::instrument::Instrumented<<pageserver::tenant::timeline::Timeline>::download_remote_layer::{closure#0}::{closure#0}> as core::future::future::Future>::poll
             at /.cargo/registry/src/github.com-1ecc6299db9ec823/tracing-0.1.37/src/instrument.rs:272:9
  10: <pageserver::tenant::timeline::Timeline>::download_remote_layer::{closure#0}
             at /pageserver/src/tenant/timeline.rs:4363:5
  11: <pageserver::tenant::timeline::Timeline>::get_reconstruct_data::{closure#0}
             at /pageserver/src/tenant/timeline.rs:2618:69
  12: <pageserver::tenant::timeline::Timeline>::get::{closure#0}
             at /pageserver/src/tenant/timeline.rs:565:13
  13: <pageserver::tenant::timeline::Timeline>::list_slru_segments::{closure#0}
             at /pageserver/src/pgdatadir_mapping.rs:427:42
  14: <pageserver::tenant::timeline::Timeline>::is_latest_commit_timestamp_ge_than::{closure#0}
             at /pageserver/src/pgdatadir_mapping.rs:390:13
  15: <pageserver::tenant::timeline::Timeline>::find_lsn_for_timestamp::{closure#0}
             at /pageserver/src/pgdatadir_mapping.rs:338:17
  16: <pageserver::tenant::timeline::Timeline>::update_gc_info::{closure#0}::{closure#0}
             at /pageserver/src/tenant/timeline.rs:3967:71
  17: <tracing::instrument::Instrumented<<pageserver::tenant::timeline::Timeline>::update_gc_info::{closure#0}::{closure#0}> as core::future::future::Future>::poll
             at /.cargo/registry/src/github.com-1ecc6299db9ec823/tracing-0.1.37/src/instrument.rs:272:9
  18: <pageserver::tenant::timeline::Timeline>::update_gc_info::{closure#0}
             at /pageserver/src/tenant/timeline.rs:3948:5
  19: <pageserver::tenant::Tenant>::refresh_gc_info_internal::{closure#0}
             at /pageserver/src/tenant.rs:2687:21
  20: <pageserver::tenant::Tenant>::gc_iteration_internal::{closure#0}
             at /pageserver/src/tenant.rs:2551:13
  21: <pageserver::tenant::Tenant>::gc_iteration::{closure#0}
             at /pageserver/src/tenant.rs:1490:13
  22: pageserver::tenant::tasks::gc_loop::{closure#0}::{closure#0}
             at /pageserver/src/tenant/tasks.rs:187:21
  23: pageserver::tenant::tasks::gc_loop::{closure#0}
             at /pageserver/src/tenant/tasks.rs:208:5
```

## Problem

## Summary of changes

## Checklist before requesting a review

- [ ] I have performed a self-review of my code.
- [ ] If it is a core feature, I have added thorough tests.
- [ ] Do we need to implement analytics? if so did you add the relevant
metrics to the dashboard?
- [ ] If this PR requires public announcement, mark it with
/release-notes label and add several sentences in this section.

## Checklist before merging

- [ ] Do not forget to reformat commit message to not include the above
checklist
2023-06-21 18:00:14 +03:00
Dmitry Rodionov
75d583c04a Tenant::load: fix uninit timeline marker processing (#4458)
## Problem

During timeline creation we create special mark file which presense
indicates that initialization didnt complete successfully. In case of a
crash restart we can remove such half-initialized timeline and following
retry from control plane side should perform another attempt.

So in case of a possible crash restart during initial loading we have
following picture:

```
timelines
| - <timeline_id>___uninit
| - <timeline_id>
| - | <timeline files>
```

We call `std::fs::read_dir` to walk files in `timelines` directory one
by one. If we see uninit file
we proceed with deletion of both, timeline directory and uninit file. If
we see timeline we check if uninit file exists and do the same cleanup.
But in fact its possible to get both branches to be true at the same
time. Result of readdir doesnt reflect following directory state
modifications. So you can still get "valid" entry on the next iteration
of the loop despite the fact that it was deleted in one of the previous
iterations of the loop.

To see that you can apply the following patch (it disables uninit mark
cleanup on successful timeline creation):
```diff
diff --git a/pageserver/src/tenant.rs b/pageserver/src/tenant.rs
index 4beb2664..b3cdad8f 100644
--- a/pageserver/src/tenant.rs
+++ b/pageserver/src/tenant.rs
@@ -224,11 +224,6 @@ impl UninitializedTimeline<'_> {
                             )
                         })?;
                 }
-                uninit_mark.remove_uninit_mark().with_context(|| {
-                    format!(
-                        "Failed to remove uninit mark file for timeline {tenant_id}/{timeline_id}"
-                    )
-                })?;
                 v.insert(Arc::clone(&new_timeline));
 
                 new_timeline.maybe_spawn_flush_loop();
```
And perform the following steps:

```bash
neon_local init
neon_local start
neon_local tenant create
neon_local stop
neon_local start
```

The error is:
```log
INFO load{tenant_id=X}:blocking: Found an uninit mark file .neon/tenants/X/timelines/Y.___uninit, removing the timeline and its uninit mark
2023-06-09T18:43:41.664247Z ERROR load{tenant_id=X}: load failed, setting tenant state to Broken: failed to load metadata

Caused by:
    0: Failed to read metadata bytes from path .neon/tenants/X/timelines/Y/metadata
    1: No such file or directory (os error 2)
```

So uninit mark got deleted together with timeline directory but we still
got directory entry for it and tried to load it.

The bug prevented tenant from being successfully loaded.

## Summary of changes

Ideally I think we shouldnt place uninit marks in the same directory as timeline directories but move them to separate directory and
gather them as an input to actual listing, but that would be sort of an
on-disk format change, so just check whether entries are still valid
before operating on them.
2023-06-21 14:25:58 +03:00
Alek Westover
2023e22ed3 Add RelationError error type to pageserver rather than string parsing error messages (#4508) 2023-06-19 13:14:20 -04:00
Christian Schwarz
036fda392f log timings for compact_level0_phase1 (#4527)
The data will help decide whether it's ok
to keep holding Timeline::layers in shared mode until
after we've calculated the holes.

Other timings are to understand the general breakdown
of timings in that function.

Context: https://github.com/neondatabase/neon/issues/4492
2023-06-19 17:25:57 +03:00
Arseny Sher
3b06a5bc54 Raise pageserver walreceiver timeouts.
I observe sporadic reconnections with ~10k idle computes. It looks like a
separate issue, probably walreceiver runtime gets blocked somewhere, but in any
case 2-3 seconds is too small.
2023-06-19 15:59:38 +04:00
Christian Schwarz
78082d0b9f create_delta_layer: avoid needless stat (#4489)
We already do it inside `frozen_layer.write_to_disk()`.

Context:
https://github.com/neondatabase/neon/pull/4441#discussion_r1228083959
2023-06-16 16:54:41 +02:00
Christian Schwarz
14d495ae14 create_delta_layer: improve misleading TODO comment (#4488)
Context:
https://github.com/neondatabase/neon/pull/4441#discussion_r1228086608
2023-06-16 14:23:55 +03:00
Dmitry Rodionov
472cc17b7a propagate lock guard to background deletion task (#4495)
## Problem

1. During the rollout we got a panic: "timeline that we were deleting
was concurrently removed from 'timelines' map" that was caused by lock
guard not being propagated to the background part of the deletion.
Existing test didnt catch it because failpoint that was used for
verification was placed earlier prior to background task spawning.
2. When looking at surrounding code one more bug was detected. We
removed timeline from the map before deletion is finished, which breaks
client retry logic, because it will indicate 404 before actual deletion
is completed which can lead to client stopping its retry poll earlier.

## Summary of changes

1. Carry the lock guard over to background deletion. Ensure existing
test case fails without applied patch (second deletion becomes stuck
without it, which eventually leads to a test failure).
2. Move delete_all call earlier so timeline is removed from the map is
the last thing done during deletion.

Additionally I've added timeline_id to the `update_gc_info` span,
because `debug_assert_current_span_has_tenant_and_timeline_id` in
`download_remote_layer` was firing when `update_gc_info` lead to
on-demand downloads via `find_lsn_for_timestamp` (caught by @problame).
This is not directly related to the PR but fixes possible flakiness.

Another smaller set of changes involves deletion wrapper used in python
tests. Now there is a simpler wrapper that waits for deletions to
complete `timeline_delete_wait_completed`. Most of the
test_delete_timeline.py tests make negative tests, i.e., "does
ps_http.timeline_delete() fail in this and that scenario".
These can be left alone. Other places when we actually do the deletions,
we need to use the helper that polls for completion.

Discussion
https://neondb.slack.com/archives/C03F5SM1N02/p1686668007396639

resolves #4496

---------

Co-authored-by: Christian Schwarz <christian@neon.tech>
2023-06-15 17:30:12 +03:00
Alex Chi Z
2252c5c282 metrics: convert some metrics to pageserver-level (#4490)
## Problem

Some metrics are better to be observed at page-server level. Otherwise,
as we have a lot of tenants in production, we cannot do a sum b/c
Prometheus has limit on how many time series we can aggregate. This also
helps reduce metrics scraping size.

## Summary of changes

Some integration tests are likely not to pass as it will check the
existence of some metrics. Waiting for CI complete and fix them.

Metrics downgraded: page cache hit (where we are likely to have a
page-server level page cache in the future instead of per-tenant), and
reconstruct time (this would better be tenant-level, as we have one pg
replayer for each tenant, but now we make it page-server level as we do
not need that fine-grained data).

---------

Signed-off-by: Alex Chi <iskyzh@gmail.com>
2023-06-14 17:12:34 -04:00
Dmitry Rodionov
ee9a5bae43 Filter only active timelines for compaction (#4487)
Previously we may've included Stopping/Broken timelines here, which
leads to errors in logs -> causes tests to sporadically fail

resolves #4467
2023-06-14 19:07:42 +03:00
Christian Schwarz
3693d1f431 turn Timeline::layers into tokio::sync::RwLock (#4441)
This is preliminary work for/from #4220 (async `Layer::get_value_reconstruct_data`).

# Full Stack Of Preliminary PRs

Thanks to the countless preliminary PRs, this conversion is relatively
straight-forward.

1. Clean-ups
  * https://github.com/neondatabase/neon/pull/4316
  * https://github.com/neondatabase/neon/pull/4317
  * https://github.com/neondatabase/neon/pull/4318
  * https://github.com/neondatabase/neon/pull/4319
  * https://github.com/neondatabase/neon/pull/4321
* Note: these were mostly to find an alternative to #4291, which I
   thought we'd need in my original plan where we would need to convert
   `Tenant::timelines` into an async locking primitive (#4333). In reviews,
   we walked away from that, but these cleanups were still quite useful.
2. https://github.com/neondatabase/neon/pull/4364
3. https://github.com/neondatabase/neon/pull/4472
4. https://github.com/neondatabase/neon/pull/4476
5. https://github.com/neondatabase/neon/pull/4477
6. https://github.com/neondatabase/neon/pull/4485

# Significant Changes In This PR

## `compact_level0_phase1` & `create_delta_layer`

This commit partially reverts

   "pgserver: spawn_blocking in compaction (#4265)"
    4e359db4c7.

Specifically, it reverts the `spawn_blocking`-ificiation of
`compact_level0_phase1`.
If we didn't revert it, we'd have to use `Timeline::layers.blocking_read()`
inside `compact_level0_phase1`. That would use up a thread in the
`spawn_blocking` thread pool, which is hard-capped.

I considered wrapping the code that follows the second
`layers.read().await` into `spawn_blocking`, but there are lifetime
issues with `deltas_to_compact`.

Also, this PR switches the `create_delta_layer` _function_ back to
async, and uses `spawn_blocking` inside to run the code that does sync
IO, while keeping the code that needs to lock `Timeline::layers` async.

## `LayerIter` and `LayerKeyIter` `Send` bounds

I had to add a `Send` bound on the `dyn` type that `LayerIter`
and `LayerKeyIter` wrap. Why? Because we now have the second
`layers.read().await` inside `compact_level0_phase`, and these
iterator instances are held across that await-point.

More background:
https://github.com/neondatabase/neon/pull/4462#issuecomment-1587376960

## `DatadirModification::flush`

Needed to replace the `HashMap::retain` with a hand-rolled variant
because `TimelineWriter::put` is now async.
2023-06-13 18:38:41 +02:00
Christian Schwarz
fdf7a67ed2 init_empty_layer_map: use try_write (#4485)
This is preliminary work for/from #4220 (async
`Layer::get_value_reconstruct_data`).
Or more specifically, #4441, where we turn Timeline::layers into a
tokio::sync::RwLock.

By using try_write() here, we can avoid turning init_empty_layer_map
async,
which is nice because much of its transitive call(er) graph isn't async.
2023-06-13 13:49:40 +02:00
Christian Schwarz
754ceaefac make TimelineWriter Send by using tokio::sync Mutex internally (#4477)
This is preliminary work for/from #4220 (async
`Layer::get_value_reconstruct_data`).

There, we want to switch `Timeline::layers` to be a
`tokio::sync::RwLock`.

That will require the `TimelineWriter` to become async, because at times
its functions need to lock `Timeline::layers` in order to freeze the
open layer.

While doing that, rustc complains that we're now holding
`Timeline::write_lock` across await points (lock order is that
`write_lock` must be acquired before `Timelines::layers`).

So, we need to switch it over to an async primitive.
2023-06-13 10:15:25 +02:00
Christian Schwarz
939593d0d3 refactor check_checkpoint_distance to prepare for async Timeline::layers (#4476)
This is preliminary work for/from #4220 (async
`Layer::get_value_reconstruct_data`).

There, we want to switch `Timeline::layers` to be a
`tokio::sync::RwLock`.

That will require the `TimelineWriter` to become async.

That will require `freeze_inmem_layer` to become async.

So, inside check_checkpoint_distance, we will have
`freeze_inmem_layer().await`.

But current rustc isn't smart enough to understand that we
`drop(layers)` earlier, and hence, will complain about the `!Send`
`layers` being held across the `freeze_inmem_layer().await`-point.

This patch puts the guard into a scope, so rustc will shut up in the
next patch where we make the transition for `TimelineWriter`.

obsoletes https://github.com/neondatabase/neon/pull/4474
2023-06-12 17:45:56 +01:00
Christian Schwarz
2011cc05cd make Delta{Value,Key}Iter Send (#4472)
... by switching the internal RwLock to a OnceCell.

This is preliminary work for/from #4220 (async `Layer::get_value_reconstruct_data`).

See https://github.com/neondatabase/neon/pull/4462#issuecomment-1587398883
for more context.

fixes https://github.com/neondatabase/neon/issues/4471
2023-06-12 17:45:56 +01:00
Heikki Linnakangas
e4f05ce0a2 Enable sanity check that disk_consistent_lsn is valid on created timeline.
Commit `create_test_timeline: always put@initdb_lsn the minimum required keys`
already switched us over to using valid initdb_lsns.

All that's left to do is to actually flush the minimum keys so that
we move from disk_consistent_lsn=Lsn(0) to disk_consistent_lsn=initdb_lsn.

Co-authored-by: Christian Schwarz <christian@neon.tech>

Part of https://github.com/neondatabase/neon/pull/4364
2023-06-12 11:56:49 +01:00
Heikki Linnakangas
8d106708d7 Clean up timeline initialization code.
Clarify who's responsible for initializing the layer map. There were
previously two different ways to do it:

- create_empty_timeline and bootstrap_timeline let prepare_timeline()
  initialize an empty layer map.

- branch_timeline passed a flag to initialize_with_lock() to tell
  initialize_with_lock to call load_layer_map(). Because it was a
  newly created timeline, load_layer_map() never found any layer
  files, so it just initialized an empty layer map.

With this commit, prepare_new_timeline() always does it. The LSN to
initialize it with is passed as argument.

Other changes per function:

prepare_timeline:
- rename to 'prepare_new_timeline' to make it clear that it's only used
  when creating a new timeline, not when loading an existing timeline
- always initialize an empty layer map. The caller can pass the LSN to
  initialize it with. (Previously, prepare_timeline would optionally
  load the layer map at 'initdb_lsn'. Some caller used that, while others
  let initialize_with_lock do it

initialize_with_lock:
- As mentioned above, remove the option to load the layer map
- Acquire the 'timelines' lock in the function itself. None of the callers
  did any other work while holding the lock.
- Rename it to finish_creation() to make its intent more clear. It's only
  used when creating a new timeline now.

create_timeline_data:
- Rename to create_timeline_struct() for clarity. It just initializes
  the Timeline struct, not any other "data"

create_timeline_files:
- use create_dir rather than create_dir_all, to be a little more strict.
  We know that the parent directory should already exist, and the timeline
  directory should not exist.
- Move the call to create_timeline_struct() to the caller. It was just
  being "passed through"

Part of https://github.com/neondatabase/neon/pull/4364
2023-06-12 11:56:49 +01:00
Christian Schwarz
f450369b20 timeline_init_and_sync: don't hold Tenant::timelines while load_layer_map
This patch inlines `initialize_with_lock` and then reorganizes the code
such that we can `load_layer_map` without holding the
`Tenant::timelines` lock.

As a nice aside, we can get rid of the dummy() uninit mark, which has
always been a terrible hack.

Part of https://github.com/neondatabase/neon/pull/4364
2023-06-12 11:56:49 +01:00
Christian Schwarz
aad918fb56 create_test_timeline: tests for put@initdb_lsn optimization code 2023-06-12 11:04:49 +01:00
Christian Schwarz
86dd8c96d3 add infrastructure to expect use of initdb_lsn flush optimization 2023-06-12 11:04:49 +01:00
Christian Schwarz
6a65c4a4fe create_test_timeline: always put@initdb_lsn the minimum required keys (#4451)
See the added comment on `create_empty_timeline`.

The various test cases now need to set a valid `Lsn` instead of
`Lsn(0)`.

Rough context:
https://github.com/neondatabase/neon/pull/4364#discussion_r1221995691
2023-06-12 09:28:34 +00:00
Alex Chi Z
cdce04d721 pgserver: add local manifest for atomic operation (#4422)
## Problem

Part of https://github.com/neondatabase/neon/issues/4418

## Summary of changes

This PR implements the local manifest interfaces. After the refactor of
timeline is done, we can integrate this with the current storage. The
reader will stop at the first corrupted record.

---------

Signed-off-by: Alex Chi <iskyzh@gmail.com>
Co-authored-by: bojanserafimov <bojan.serafimov7@gmail.com>
2023-06-08 19:34:25 -04:00
Dmitry Rodionov
d53f9ab3eb delete timelines from s3 (#4384)
Delete data from s3 when timeline deletion is requested

## Summary of changes

UploadQueue is altered to support scheduling of delete operations in
stopped state. This looks weird, and I'm thinking whether there are
better options/refactorings for upload client to make it look better.

Probably can be part of https://github.com/neondatabase/neon/issues/4378

Deletion is implemented directly in existing endpoint because changes are not
that significant. If we want more safety we can separate those or create
feature flag for new behavior.

resolves [#4193](https://github.com/neondatabase/neon/issues/4193)

---------

Co-authored-by: Joonas Koivunen <joonas@neon.tech>
2023-06-08 15:01:22 +03:00
Dmitry Rodionov
8560a98d68 fix openapi spec to pass swagger editor validation (#4445)
There shouldnt be a dash before `type: object`. Also added description.
2023-06-08 13:25:30 +03:00
Alex Chi Z
2e687bca5b refactor: use LayerDesc in layer map (part 1) (#4408)
## Problem

part of https://github.com/neondatabase/neon/issues/4392

## Summary of changes

This PR adds a new HashMap that maps persistent layer desc to the layer
object *inside* LayerMap. Originally I directly went towards adding such
layer cache in Timeline, but the changes are too many and cannot be
reviewed as a reasonably-sized PR. Therefore, we take this intermediate
step to change part of the codebase to use persistent layer desc, and
come up with other PRs to move this hash map of layer desc to the
timeline struct.

Also, file_size is now part of the layer desc.

---------

Signed-off-by: Alex Chi <iskyzh@gmail.com>
Co-authored-by: bojanserafimov <bojan.serafimov7@gmail.com>
2023-06-07 18:28:18 +03:00
Dmitry Rodionov
1a1019990a map TenantState::Broken to TenantAttachmentStatus::Failed (#4371)
## Problem

Attach failures are not reported in public part of the api (in
`attachment_status` field of TenantInfo).

## Summary of changes

Expose TenantState::Broken as TenantAttachmentStatus::Failed

In the way its written Failed status will be reported even if no
attachment happened. (I e if tenant become broken on startup). This is
in line with other members. I e Active will be resolved to Attached even
if no actual attach took place.

This can be tweaked if needed. At the current stage it would be overengineering without clear motivation

resolves #4344
2023-06-07 18:25:30 +03:00
Joonas Koivunen
5761190e0d feat: three phased startup order (#4399)
Initial logical size calculation could still hinder our fast startup
efforts in #4397. See #4183. In deployment of 2023-06-06
about a 200 initial logical sizes were calculated on hosts which
took the longest to complete initial load (12s).

Implements the three step/tier initialization ordering described in
#4397:
1. load local tenants
2. do initial logical sizes per walreceivers for 10s
3. background tasks

Ordering is controlled by:
- waiting on `utils::completion::Barrier`s on background tasks
- having one attempt for each Timeline to do initial logical size
calculation
- `pageserver/src/bin/pageserver.rs` releasing background jobs after
timeout or completion of initial logical size calculation

The timeout is there just to safeguard in case a legitimate non-broken
timeline initial logical size calculation goes long. The timeout is
configurable, by default 10s, which I think would be fine for production
systems. In the test cases I've been looking at, it seems that these
steps are completed as fast as possible.

Co-authored-by: Christian Schwarz <christian@neon.tech>
2023-06-07 14:29:23 +03:00
Joonas Koivunen
0cef7e977d refactor: just one way to shutdown a tenant (#4407)
We have 2 ways of tenant shutdown, we should have just one.

Changes are mostly mechanical simple refactorings.

Added `warn!` on the "shutdown all remaining tasks" should trigger test
failures in the between time of not having solved the "tenant/timeline
owns all spawned tasks" issue.

Cc: #4327.
2023-06-06 15:30:55 +03:00
Joonas Koivunen
18a9d47f8e test: restore NotConnected being allowed globally (#4426)
Flakyness introduced by #4402 evidence [^1].

I had assumed the NotConnected would had been an expected io error, but
it's not. Restore the global `allowed_error`.

[^1]:
https://neon-github-public-dev.s3.amazonaws.com/reports/pr-4407/5185897757/index.html#suites/82004ab4e3720b47bf78f312dabe7c55/14f636d0ecd3939d/
2023-06-06 13:51:39 +03:00
Joonas Koivunen
77598f5d0a Better walreceiver logging (#4402)
walreceiver logs are a bit hard to understand because of partial span
usage, extra messages, ignored errors popping up as huge stacktraces.

Fixes #3330 (by spans, also demote info -> debug).

- arrange walreceivers spans into a hiearchy: 
    - `wal_connection_manager{tenant_id, timeline_id}` ->
      `connection{node_id}` -> `poller`
- unifies the error reporting inside `wal_receiver`:
- All ok errors are now `walreceiver connection handling ended: {e:#}`
- All unknown errors are still stacktraceful task_mgr reported errors
  with context `walreceiver connection handling failure`
- Remove `connect` special casing, was: `DB connection stream finished`
  for ok errors
- Remove `done replicating` special casing, was `Replication stream
  finished` for ok errors
- lowered log levels for (non-exhaustive list):
    - `WAL receiver manager started, connecting to broker` (at startup)
    - `WAL receiver shutdown requested, shutting down` (at shutdown)
    - `Connection manager loop ended, shutting down` (at shutdown)
    - `sender is dropped while join handle is still alive` (at lucky
      shutdown, see #2885)
    - `timeline entered terminal state {:?}, stopping wal connection manager
      loop` (at shutdown)
    - `connected!` (at startup)
- `Walreceiver db connection closed` (at disconnects?, was without span)
    - `Connection cancelled` (at shutdown, was without span)
- `observed timeline state change, new state is {new_state:?}` (never
  after Timeline::activate was made infallible)
- changed:
    - `Timeline dropped state updates sender, stopping wal connection
      manager loop`
    - was out of date; sender is not dropped but `Broken | Stopping` state
      transition
        - also made `debug!`
    - `Timeline dropped state updates sender before becoming active,
      stopping wal connection manager loop`
    - was out of date: sender is again not dropped but `Broken | Stopping`
      state transition
        - also made `debug!`
- log fixes:
    - stop double reporting panics via JoinError
2023-06-05 17:35:23 +03:00
Joonas Koivunen
8142edda01 test: Less flaky gc (#4416)
Solves a flaky test error in the wild[^1] by:

- Make the gc shutdown signal reading an `allowed_error`
- Note the gc shutdown signal readings as being in `allowed_error`s
- Allow passing tenant conf to init_start to avoid unncessary tenants

[^1]:
https://neon-github-public-dev.s3.amazonaws.com/reports/pr-4399/5176432780/index.html#suites/b97efae3a617afb71cb8142f5afa5224/2cd76021ea011f93
2023-06-05 15:43:52 +03:00
Joonas Koivunen
8caef2c0c5 fix: delay eviction_task as well (#4397)
As seen on deployment of 2023-06-01 release, times were improving but
there were some outliers caused by:
- timelines `eviction_task` starting while activating and running
imitation
- timelines `initial logical size` calculation

This PR fixes it so that `eviction_task` is delayed like other
background tasks fixing an oversight from earlier #4372.

After this PR activation will be two phases:
1. load and activate tenants AND calculate some initial logical sizes
2. rest of initial logical sizes AND background tasks
- compaction, gc, disk usage based eviction, timelines `eviction_task`,
consumption metrics
2023-06-05 09:37:53 +03:00
Heikki Linnakangas
9787227c35 Shield HTTP request handlers from async cancellations. (#4314)
We now spawn a new task for every HTTP request, and wait on the
JoinHandle. If Hyper drops the Future, the spawned task will keep
running. This protects the rest of the pageserver code from unexpected
async cancellations.

This creates a CancellationToken for each request and passes it to the
handler function. If the HTTP request is dropped by the client, the
CancellationToken is signaled. None of the handler functions make use
for the CancellationToken currently, but they now they could.

The CancellationToken arguments also work like documentation. When
you're looking at a function signature and you see that it takes a
CancellationToken as argument, it's a nice hint that the function might
run for a long time, and won't be async cancelled. The default
assumption in the pageserver is now that async functions are not
cancellation-safe anyway, unless explictly marked as such, but this is a
nice extra reminder.

Spawning a task for each request is OK from a performance point of view
because spawning is very cheap in Tokio, and none of our HTTP requests
are very performance critical anyway.

Fixes issue #3478
2023-06-02 08:28:13 -04:00
Alex Chi Z
66cdba990a refactor: use PersistentLayerDesc for persistent layers (#4398)
## Problem

Part of https://github.com/neondatabase/neon/issues/4373

## Summary of changes

This PR adds `PersistentLayerDesc`, which will be used in LayerMap
mapping and probably layer cache. After this PR and after we change
LayerMap to map to layer desc, we can safely drop RemoteLayerDesc.

---------

Signed-off-by: Alex Chi <iskyzh@gmail.com>
Co-authored-by: bojanserafimov <bojan.serafimov7@gmail.com>
2023-06-01 22:06:28 +03:00
Alex Chi Z
82484e8241 pgserver: add more metrics for better observability (#4323)
## Problem

This PR includes doc changes to the current metrics as well as adding
new metrics. With the new set of metrics, we can quantitatively analyze
the read amp., write amp. and space amp. in the system, when used
together with https://github.com/neondatabase/neonbench

close https://github.com/neondatabase/neon/issues/4312
ref https://github.com/neondatabase/neon/issues/4347

compaction metrics TBD, a novel idea is to print L0 file number and
number of layers in the system, and we can do this in the future when we
start working on compaction.

## Summary of changes

* Add `READ_NUM_FS_LAYERS` for computing read amp.
* Add `MATERIALIZED_PAGE_CACHE_HIT_UPON_REQUEST`.
* Add `GET_RECONSTRUCT_DATA_TIME`. GET_RECONSTRUCT_DATA_TIME +
RECONSTRUCT_TIME + WAIT_LSN_TIME should be approximately total time of
reads.
* Add `5.0` and `10.0` to `STORAGE_IO_TIME_BUCKETS` given some fsync
runs slow (i.e., > 1s) in some cases.
* Some `WAL_REDO` metrics are only used when Postgres is involved in the
redo process.

---------

Signed-off-by: Alex Chi <iskyzh@gmail.com>
2023-06-01 21:46:04 +03:00
bojanserafimov
330083638f Fix stale and misleading comment in LayerMap (#4297) 2023-06-01 05:04:46 +03:00
Konstantin Knizhnik
952d6e43a2 Add pageserver parameter forced_image_creation_limit which can be used… (#4353)
This parameter can be use to restrict number of image layers generated
because of GC request (wanted image layers).
Been set to zero it completely eliminates creation of such image layers.
So it allows to avoid extra storage consumption after merging #3673

## Problem
PR #3673 forces generation of missed image layers. So i short term is
cause cause increase (in worst case up to two times) size of storage.
It was intended (by me) that GC period is comparable with PiTR interval.
But looks like it is not the case now - GC is performed much more
frequently. It may cause the problem with space exhaustion: GC forces
new image creation while large PiTR still prevent GC from collecting old
layers.

## Summary of changes

Add new pageserver parameter` forced_image_creation_limit` which
restrict number of created image layers which are requested by GC.

## Checklist before requesting a review

- [ ] I have performed a self-review of my code.
- [ ] If it is a core feature, I have added thorough tests.
- [ ] Do we need to implement analytics? if so did you add the relevant
metrics to the dashboard?
- [ ] If this PR requires public announcement, mark it with
/release-notes label and add several sentences in this section.

## Checklist before merging

- [ ] Do not forget to reformat commit message to not include the above
checklist
2023-05-31 21:37:20 +03:00
bojanserafimov
b6447462dc Fix layer map correctness bug (#4342) 2023-05-31 12:23:00 -04:00
Joonas Koivunen
f4db85de40 Continued startup speedup (#4372)
Startup continues to be slow, work towards to alleviate it.

Summary of changes:

- pretty the functional improvements from #4366 into
`utils::completion::{Completion, Barrier}`
- extend "initial load completion" usage up to tenant background tasks
    - previously only global background tasks
- spawn_blocking the tenant load directory traversal
- demote some logging
- remove some unwraps
- propagate some spans to `spawn_blocking`

Runtime effects should be major speedup to loading, but after that, the
`BACKGROUND_RUNTIME` will be blocked for a long time (minutes). Possible
follow-ups:
- complete initial tenant sizes before allowing background tasks to
block the `BACKGROUND_RUNTIME`
2023-05-30 16:25:07 +03:00
Joonas Koivunen
db14355367 revert: static global init logical size limiter (#4368)
added in #4366. revert for testing without it; it may have unintenteded
side-effects, and it's very difficult to understand the results from the
10k load testing environments. earlier results:
https://github.com/neondatabase/neon/pull/4366#issuecomment-1567491064
2023-05-30 10:40:37 +03:00
Joonas Koivunen
cb83495744 try: startup speedup (#4366)
Startup can take a long time. We suspect it's the initial logical size
calculations. Long term solution is to not block the tokio executors but
do most of I/O in spawn_blocking.

See: #4025, #4183

Short-term solution to above:

- Delay global background tasks until initial tenant loads complete
- Just limit how many init logical size calculations can we have at the
same time to `cores / 2`

This PR is for trying in staging.
2023-05-29 21:48:38 +03:00