Commit Graph

3361 Commits

Author SHA1 Message Date
Joonas Koivunen
cff7ae0b0d fix: no more ansi colored logs (#4613)
Allure does not support ansi colored logs, yet `compute_ctl` has them.

Upgrade criterion to get rid of atty dependency, disable ansi colors,
remove atty dependency and disable ansi feature of tracing-subscriber.

This is a heavy-handed approach. I am not aware of a workflow where
you'd want to connect a terminal directly to for example `compute_ctl`,
usually you find the logs in a file. If someone had been using colors,
they will now need to:
- turn the `tracing-subscriber.default-features` to `true`
- edit their wanted project to have colors

I decided to explicitly disable ansi colors in case we would have in
future a dependency accidentally enabling the feature on
`tracing-subscriber`, which would be quite surprising but not
unimagineable.

By getting rid of `atty` from dependencies we get rid of
<https://github.com/advisories/GHSA-g98v-hv3f-hcfr>.
2023-07-03 16:37:02 +03:00
Alexander Bayandin
78a7f68902 Make pg_version and build_type regular parameters (#4311)
## Problem

All tests have already been parametrised by Postgres version and build
type (to have them distinguishable in the Allure report), but despite
it, it's anyway required to have DEFAULT_PG_VERSION and BUILD_TYPE env
vars set to corresponding values, for example to
run`test_timeline_deletion_with_files_stuck_in_upload_queue[release-pg14-local_fs]`
test it's required to set `DEFAULT_PG_VERSION=14` and
`BUILD_TYPE=release`.
This PR makes the test framework pick up parameters from the test name
itself.

## Summary of changes
- Postgres version and build type related fixtures now are
function-scoped (instead of being sessions scoped before)
- Deprecate `--pg-version` argument in favour of DEFAULT_PG_VERSION env
variable (it's easier to parse)
- GitHub autocomment now includes only one command with all the failed
tests + runs them in parallel
2023-07-03 13:51:40 +01:00
Christian Schwarz
24eaa3b7ca timeline creation: reflect failures due to ancestor LSN issues in status code (#4600)
Before, it was a `500` and control plane would retry, wereas it actually
should have stopped retrying.

(Stacked on top of https://github.com/neondatabase/neon/pull/4597 )

fixes https://github.com/neondatabase/neon/issues/4595
part of https://github.com/neondatabase/cloud/issues/5626

---------

Co-authored-by: Shany Pozin <shany@neon.tech>
2023-07-03 15:21:10 +03:00
Shany Pozin
26828560a8 Add timeouts and retries to consumption metrics reporting client (#4563)
## Problem
#4528
## Summary of changes
Add a 60 seconds default timeout to the reqwest client 
Add retries for up to 3 times to call into the metric consumption
endpoint

---------

Co-authored-by: Christian Schwarz <christian@neon.tech>
2023-07-03 15:20:49 +03:00
Alek Westover
86604b3b7d Delete Unnecessary files in Extension Bucket (#4606)
Co-authored-by: Alexander Bayandin <alexander@neon.tech>
2023-07-03 07:37:30 -04:00
Joonas Koivunen
4957bb2d48 fix(proxy): stray span enter globbers up logs (#4612)
Prod logs have deep accidential span nesting. Introduced in #3759 and
has been untouched since, maybe no one watches proxy logs? :) I found it
by accident when looking to see if proxy logs have ansi colors with
`{neon_service="proxy"}`.

The solution is to mostly stop using `Span::enter` or `Span::entered` in
async code. Kept on `Span::entered` in cancel on shutdown related path.
2023-07-03 11:53:57 +01:00
Sasha Krassovsky
ff1a1aea86 Make control plane connector send encrypted password (#4607)
Control plane needs the encrypted hash that postgres itself generates
2023-06-30 14:17:44 -07:00
Em Sharnoff
c9f05d418d Bump vm-builder v0.11.0 -> v0.11.1 (#4605)
This applies the fix from https://github.com/neondatabase/autoscaling/pull/367,
which should resolve the "leaking cloud_admin connections" issue that
has been  observed for some customers.
2023-06-30 23:49:06 +03:00
bojanserafimov
9de1a6fb14 cold starts: Run sync_safekeepers on compute_ctl shutdown (#4588) 2023-06-30 16:29:47 -04:00
Konstantin Knizhnik
fbd37740c5 Make file_cache logging less verbose (#4601)
## Problem


Message "set local file cache limit to..." polutes compute logs.

## Summary of changes

## Checklist before requesting a review

- [ ] I have performed a self-review of my code.
- [ ] If it is a core feature, I have added thorough tests.
- [ ] Do we need to implement analytics? if so did you add the relevant
metrics to the dashboard?
- [ ] If this PR requires public announcement, mark it with
/release-notes label and add several sentences in this section.

## Checklist before merging

- [ ] Do not forget to reformat commit message to not include the above
checklist

Co-authored-by: Konstantin Knizhnik <knizhnik@neon.tech>
2023-06-30 21:55:56 +03:00
Anastasia Lubennikova
3e55d9dec6 Bump vendor/postgres
Point to REL_14_STABLE_neon and REL_15_STABLE_neon.
This change updates PostgreSQL versions to 14.8 and 15.3
2023-06-30 16:29:10 +03:00
Christian Schwarz
f558f88a08 refactor: distinguished error type for timeline creation failure (#4597)
refs https://github.com/neondatabase/neon/issues/4595
2023-06-30 14:53:21 +02:00
Dmitry Rodionov
b990200496 tests: use shortcut everywhere to get timeline path (#4586) 2023-06-30 15:01:06 +03:00
Alex Chi Z
7e20b49da4 refactor: use LayerDesc in LayerMap (part 2) (#4437)
## Problem

part of https://github.com/neondatabase/neon/issues/4392, continuation
of https://github.com/neondatabase/neon/pull/4408

## Summary of changes

This PR removes all layer objects from LayerMap and moves it to the
timeline struct. In timeline struct, LayerFileManager maps a layer
descriptor to a layer object, and it is stored in the same RwLock as
LayerMap to avoid behavior difference.

Key changes:

* LayerMap now does not have generic, and only stores descriptors.
* In Timeline, we add a new struct called layer mapping.
* Currently, layer mapping is stored in the same lock with layer map.
Every time we retrieve data from the layer map, we will need to map the
descriptor to the actual object.
* Replace_historic is moved to layer mapping's replace, and the return
value behavior is different from before. I'm a little bit unsure about
this part and it would be good to have some comments on that.
* Some test cases are rewritten to adapt to the new interface, and we
can decide whether to remove it in the future because it does not make
much sense now.
* LayerDescriptor is moved to `tests` module and should only be intended
for unit testing / benchmarks.
* Because we now have a usage pattern like "take the guard of lock, then
get the reference of two fields", we want to avoid dropping the
incorrect object when we intend to unlock the lock guard. Therefore, a
new set of helper function `drop_r/wlock` is added. This can be removed
in the future when we finish the refactor.

TODOs after this PR: fully remove RemoteLayer, and move LayerMapping to
a separate LayerCache.

all refactor PRs:

```
#4437 --- #4479 ------------ #4510 (refactor done at this point)
      \-- #4455 -- #4502 --/
```

---------

Signed-off-by: Alex Chi Z <chi@neon.tech>
2023-06-29 15:06:07 -04:00
Alek Westover
032b603011 Fix: Wrong Enum Variant (#4589) 2023-06-29 10:55:02 -04:00
Alex Chi Z
ca0e0781c8 use const instead of magic number for repartition threshold (#4286)
There is a magic number about how often we repartition and therefore
affecting how often we compact. This PR makes this number `10` a global
constant and add docs.

---------

Signed-off-by: Alex Chi Z <chi@neon.tech>
2023-06-29 16:56:17 +03:00
Alexander Bayandin
b2a5e91a88 Upload custom extensions to S3 (#4585)
## Problem

We want to have a number of custom extensions that will not be available
by default, as an example of such is [Postgres
Anonymizer](https://postgresql-anonymizer.readthedocs.io/en/stable/)
(please note that the extension should be added to
`shared_preload_libraries`). To distinguish them, custom extensions
should be added to a different S3 path:

```
s3://<bucket>/<release version>/<postgres_version>/<ext_name>/share/extensions/
s3://<bucket>/<release version>/<postgres_version>/<ext_name>/lib

where <ext_name> is an extension name
```

Resolves https://github.com/neondatabase/neon/issues/4582

## Summary of changes
- Add Postgres Anonymizer extension to Dockerfile (it's included only to
postgres-extensions target)
- Build extensions image from postgres-extensions target in a workflow
- Upload custom extensions to S3 (different directory)
2023-06-29 16:33:26 +03:00
Joonas Koivunen
44e7d5132f fix: hide token from logs (#4584)
fixes #4583 and also changes all needlessly arg listing places to use
`skip_all`.
2023-06-29 15:53:16 +03:00
Alex Chi Z
c19681bc12 neon_local: support force init (#4363)
When we use local SSD for bench and create `.neon` directory before we
do `cargo neon init`, the initialization process will error due to
directory already exists. This PR adds a flag `--force` that removes
everything inside the directory if `.neon` already exists.

---------

Signed-off-by: Alex Chi Z. <chi@neon.tech>
2023-06-28 11:39:07 -04:00
Shany Pozin
ec9b585837 Add Activating as a possible state for attaching a tenant in test_tenant_relocation validation (#4581)
Fix flakyness of test_tenant_relocation
2023-06-28 12:35:52 +03:00
Joonas Koivunen
02ef246db6 refactor: to pattern of await after timeout (#4432)
Refactor the `!completed` to be about `Option<_>` instead, side-stepping
any boolean true/false or false/true. As discussed on
https://github.com/neondatabase/neon/pull/4399#discussion_r1219321848
2023-06-28 06:18:45 +00:00
Konstantin Knizhnik
195d4932c6 Set LwLSN after WAL records when redo is performed or skipped (#4579)
## Problem

See #4516

Inspecting log it is possible to notice that if lwlsn is set to the
beginning of applied WAL record, then
incorrect version of the page is loaded:

```
2023-06-27 18:36:51.930 GMT [3273945] CONTEXT:  WAL redo at 0/14AF6F0 for Heap/INSERT: off 2 flags 0x01; blkref #0: rel 1663/5/1259, blk 0 FPW
2023-06-27 18:36:51.930 GMT [3273945] LOG:  Do REDO block 0 of rel 1663/5/1259 fork 0 at LSN 0/**014AF6F0**..0/014AFA60
2023-06-27 18:37:02.173 GMT [3273963] LOG:  Read blk 0 in rel 1663/5/1259 fork 0 (request LSN 0/**014AF6F0**): lsn=0/**0143C7F8** at character 22
2023-06-27 18:37:47.780 GMT [3273945] LOG:  apply WAL record at 0/1BB8F38 xl_tot_len=188, xl_prev=0/1BB8EF8 
2023-06-27 18:37:47.780 GMT [3273945] CONTEXT:  WAL redo at 0/1BB8F38 for Heap/INPLACE: off 2; blkref #0: rel 1663/5/1259, blk 0
2023-06-27 18:37:47.780 GMT [3273945] LOG:  Do REDO block 0 of rel 1663/5/1259 fork 0 at LSN 0/01BB8F38..0/01BB8FF8
2023-06-27 18:37:47.780 GMT [3273945] CONTEXT:  WAL redo at 0/1BB8F38 for Heap/INPLACE: off 2; blkref #0: rel 1663/5/1259, blk 0
2023-06-27 18:37:47.780 GMT [3273945] PANIC:  invalid lp
```

## Summary of changes

1. Use end record LSN  for both cases
2. Update lwlsn for relation metadata

## Checklist before requesting a review

- [ ] I have performed a self-review of my code.
- [ ] If it is a core feature, I have added thorough tests.
- [ ] Do we need to implement analytics? if so did you add the relevant
metrics to the dashboard?
- [ ] If this PR requires public announcement, mark it with
/release-notes label and add several sentences in this section.

## Checklist before merging

- [ ] Do not forget to reformat commit message to not include the above
checklist
2023-06-28 09:04:13 +03:00
Alexander Bayandin
7fe0a4bf1a Fix promote-images job (#4577)
## Problem

```
+ crane tag neondatabase/extensions:3337 latest
Error: fetching "neondatabase/extensions:3337": GET https://index.docker.io/v2/neondatabase/extensions/manifests/3337: MANIFEST_UNKNOWN: manifest unknown; unknown tag=3337
```

We don't build `neondatabase/extensions` image yet (broken in
https://github.com/neondatabase/neon/pull/4505)

## Summary of changes
- Do not try to interact with `neondatabase/extensions`
2023-06-27 20:05:10 +03:00
bojanserafimov
ef2b9ffbcb Basebackup forward compatibility (#4572) 2023-06-27 12:05:27 -04:00
Alexander Bayandin
250a27fb85 Upload Postgres Extensions to S3 (#4505)
## Problem

We want to store Postgres Extensions in S3 (resolves
https://github.com/neondatabase/neon/issues/4493).

Proposed solution:
- Create a separate docker image (from scratch) that contains only
extensions
- Do not include extensions into compute-node (except for neon
extensions)*
- For release and main builds upload extract extension from the image
and upload to S3 (`s3://<bucket>/<release
version>/<postgres_version>/...`)**

*) We're not doing it until the feature is not fully implemented
**) This differs from the initial proposal in
https://github.com/neondatabase/neon/issues/4493 of putting extensions
straight into `s3://<bucket>/<postgres_version>/...`, because we can't
upload directory atomicly. A drawback of this is that we end up with
unnecessary copies of files ~2.1 GB per release (i.e. +2.1 GB for each
commit in main also). We don't really need to update extensions for each
release if there're no relevant changes, but this requires extra work.

## Summary of changes
- Created a separate stage in Dockerfile.compute-node
`postgres-extensions` that contains only extensions
- Added a separate step in a workflow that builds `postgres-extensions`
image (because of a bug in kaniko this step is commented out because it
takes way too long to get built)
- Extract extensions from the image and upload files to S3 for release
and main builds
- Upload extenstions only for staging (for now)
2023-06-27 16:23:22 +01:00
Shany Pozin
d748615c1f RemoteTimelineClient::delete_all() to use s3::delete_objects (#4461)
## Problem
[#4325](https://github.com/neondatabase/neon/issues/4325)
## Summary of changes
Use delete_objects() method
2023-06-27 15:01:32 +03:00
Dmitry Rodionov
681c6910c2 Straighten the spec for timeline delete (#4538)
## Problem

Lets keep 500 for unusual stuff that is not considered normal. Came up
during one of the discussions around console logs now seeing this 500's.

## Summary of changes

- Return 409 Conflict instead of 500
- Remove 200 ok status because it is not used anymore
2023-06-27 13:56:32 +03:00
Vadim Kharitonov
148f0f9b21 Compile pg_roaringbitmap extension (#4564)
## Problem

```
postgres=# create extension roaringbitmap;
CREATE EXTENSION
postgres=# select roaringbitmap('{1,100,10}');
                 roaringbitmap
------------------------------------------------
 \x3a30000001000000000002001000000001000a006400
(1 row)
```
2023-06-27 10:55:03 +01:00
Shany Pozin
a7f3f5f356 Revert "run Layer::get_value_reconstruct_data in spawn_blocking#4498" (#4569)
This reverts commit 1faf69a698.
2023-06-27 10:57:28 +03:00
Felix Prasanna
00d1cfa503 bump VM_BUILDER_VERSION to 0.11.0 (#4566)
Routine bump of autoscaling version `0.8.0` -> `0.11.0`
2023-06-26 14:10:27 -04:00
Christian Schwarz
1faf69a698 run Layer::get_value_reconstruct_data in spawn_blocking (#4498)
This PR concludes the "async `Layer::get_value_reconstruct_data`"
project.

The problem we're solving is that, before this patch, we'd execute
`Layer::get_value_reconstruct_data` on the tokio executor threads.
This function is IO- and/or CPU-intensive.
The IO is using VirtualFile / std::fs; hence it's blocking.
This results in unfairness towards other tokio tasks, especially under
(disk) load.

Some context can be found at
https://github.com/neondatabase/neon/issues/4154
where I suspect (but can't prove) load spikes of logical size
calculation to
cause heavy eviction skew.

Sadly we don't have tokio runtime/scheduler metrics to quantify the
unfairness.
But generally, we know blocking the executor threads on std::fs IO is
bad.
So, let's have this change and watch out for severe perf regressions in
staging & during rollout.

## Changes

* rename `Layer::get_value_reconstruct_data` to
`Layer::get_value_reconstruct_data_blocking`
* add a new blanket impl'd `Layer::get_value_reconstruct_data`
`async_trait` method that runs `get_value_reconstruct_data_blocking`
inside `spawn_blocking`.
* The `spawn_blocking` requires `'static` lifetime of the captured
variables; hence I had to change the data flow to _move_ the
`ValueReconstructState` into and back out of get_value_reconstruct_data
instead of passing a reference. It's a small struct, so I don't expect a
big performance penalty.

## Performance

Fundamentally, the code changes cause the following performance-relevant
changes:

* Latency & allocations: each `get_value_reconstruct_data` call now
makes a short-lived allocation because `async_trait` is just sugar for
boxed futures under the hood
* Latency: `spawn_blocking` adds some latency because it needs to move
the work to a thread pool
* using `spawn_blocking` plus the existing synchronous code inside is
probably more efficient better than switching all the synchronous code
to tokio::fs because _each_ tokio::fs call does `spawn_blocking` under
the hood.
* Throughput: the `spawn_blocking` thread pool is much larger than the
async executor thread pool. Hence, as long as the disks can keep up,
which they should according to AWS specs, we will be able to deliver
higher `get_value_reconstruct_data` throughput.
* Disk IOPS utilization: we will see higher disk utilization if we get
more throughput. Not a problem because the disks in prod are currently
under-utilized, according to node_exporter metrics & the AWS specs.
* CPU utilization: at higher throughput, CPU utilization will be higher.

Slightly higher latency under regular load is acceptable given the
throughput gains and expected better fairness during disk load peaks,
such as logical size calculation peaks uncovered in #4154.


## Full Stack Of Preliminary PRs

This PR builds on top of the following preliminary PRs

1. Clean-ups
  * https://github.com/neondatabase/neon/pull/4316
  * https://github.com/neondatabase/neon/pull/4317
  * https://github.com/neondatabase/neon/pull/4318
  * https://github.com/neondatabase/neon/pull/4319
  * https://github.com/neondatabase/neon/pull/4321
* Note: these were mostly to find an alternative to #4291, which I
thought we'd need in my original plan where we would need to convert
`Tenant::timelines` into an async locking primitive (#4333). In reviews,
we walked away from that, but these cleanups were still quite useful.
2. https://github.com/neondatabase/neon/pull/4364
3. https://github.com/neondatabase/neon/pull/4472
4. https://github.com/neondatabase/neon/pull/4476
5. https://github.com/neondatabase/neon/pull/4477
6. https://github.com/neondatabase/neon/pull/4485
7. https://github.com/neondatabase/neon/pull/4441
2023-06-26 11:43:11 +02:00
Christian Schwarz
44a441080d bring back spawn_blocking for compact_level0_phase1 (#4537)
The stats for `compact_level0_phase` that I added in #4527 show the
following breakdown (24h data from prod, only looking at compactions
with > 1 L1 produced):

* 10%ish of wall-clock time spent between the two read locks
* I learned that the `DeltaLayer::iter()` and `DeltaLayer::key_iter()`
calls actually do IO, even before we call `.next()`. I suspect that is
why they take so much time between the locks.
* 80+% of wall-clock time spent writing layer files
* Lock acquisition time is irrelevant (low double-digit microseconds at
most)
* The generation of the holes holds the read lock for a relatively long
time and it's proportional to the amount of keys / IO required to
iterate over them (max: 110ms in prod; staging (nightly benchmarks):
multiple seconds).

Find below screenshots from my ad-hoc spreadsheet + some graphs.

<img width="1182" alt="image"
src="https://github.com/neondatabase/neon/assets/956573/81398b3f-6fa1-40dd-9887-46a4715d9194">

<img width="901" alt="image"
src="https://github.com/neondatabase/neon/assets/956573/e4ac0393-f2c1-4187-a5e5-39a8b0c394c9">

<img width="210" alt="image"
src="https://github.com/neondatabase/neon/assets/956573/7977ade7-6aa5-4773-a0a2-f9729aecee0d">


## Changes In This PR

This PR makes the following changes:

* rearrange the `compact_level0_phase1` code such that we build the
`all_keys_iter` and `all_values_iter` later than before
* only grab the `Timeline::layers` lock once, and hold it until we've
computed the holes
* run compact_level0_phase1 in spawn_blocking, pre-grabbing the
`Timeline::layers` lock in the async code and passing it in as an
`OwnedRwLockReadGuard`.
* the code inside spawn_blocking drops this guard after computing the
holds
* the `OwnedRwLockReadGuard` requires the `Timeline::layers` to be
wrapped in an `Arc`. I think that's Ok, the locking for the RwLock is
more heavy-weight than an additional pointer indirection.
 
## Alternatives Considered

The naive alternative is to throw the entire function into
`spawn_blocking`, and use `blocking_read` for `Timeline::layers` access.

What I've done in this PR is better because, with this alternative,
1. while we `blocking_read()`, we'd waste one slot in the spawn_blocking
pool
2. there's deadlock risk because the spawn_blocking pool is a finite
resource


![image](https://github.com/neondatabase/neon/assets/956573/46c419f1-6695-467e-b315-9d1fc0949058)

## Metadata

Fixes https://github.com/neondatabase/neon/issues/4492
2023-06-26 11:42:17 +02:00
Sasha Krassovsky
c215389f1c quote_ident identifiers when creating neon_superuser (#4562)
## Problem
2023-06-24 10:34:15 +03:00
Sasha Krassovsky
b1477b4448 Create neon_superuser role, grant it to roles created from control plane (#4425)
## Problem
Currently, if a user creates a role, it won't by default have any grants
applied to it. If the compute restarts, the grants get applied. This
gives a very strange UX of being able to drop roles/not have any access
to anything at first, and then once something triggers a config
application, suddenly grants are applied. This removes these grants.
2023-06-24 01:38:27 +03:00
Christian Schwarz
a500bb06fb use preinitialize_metrics to initialize page cache metrics (#4557)
This is follow-up to

```
commit 2252c5c282
Author: Alex Chi Z <iskyzh@gmail.com>
Date:   Wed Jun 14 17:12:34 2023 -0400

    metrics: convert some metrics to pageserver-level (#4490)
```
2023-06-23 16:40:50 -04:00
Christian Schwarz
15456625c2 don't use MGMT_REQUEST_RUNTIME for consumption metrics synthetic size worker (#4560)
The consumption metrics synthetic size worker does logical size
calculation. Logical size calculation currently does synchronous disk
IO. This blocks the MGMT_REQUEST_RUNTIME's executor threads, starving
other futures.

While there's work on the way to move the synchronous disk IO into
spawn_blocking, the quickfix here is to use the BACKGROUND_RUNTIME
instead of MGMT_REQUEST_RUNTIME.

Actually it's not just a quickfix. We simply shouldn't be blocking
MGMT_REQUEST_RUNTIME executor threads on CPU or sync disk IO.
That work isn't done yet, as many of the mgmt tasks still _do_ disk IO.
But it's not as intensive as the logical size calculations that we're
fixing here.

While we're at it, fix disk-usage-based eviction in a similar way. It
wasn't the culprit here, according to prod logs, but it can
theoretically be a little CPU-intensive.

More context, including graphs from Prod:
https://neondb.slack.com/archives/C03F5SM1N02/p1687541681336949
2023-06-23 15:40:36 -04:00
Vadim Kharitonov
a3f0dd2d30 Compile pg_uuidv7 (#4558)
Doc says that it should be added into `shared_preload_libraries`, but,
practically, it's not required.

```
postgres=# create extension pg_uuidv7;
CREATE EXTENSION
postgres=# SELECT uuid_generate_v7();
           uuid_generate_v7
--------------------------------------
 0188e823-3f8f-796c-a92c-833b0b2d1746
(1 row)
```
2023-06-23 15:56:49 +01:00
Christian Schwarz
76718472be add pageserver-global histogram for basebackup latency (#4559)
The histogram distinguishes by ok/err.

I took the liberty to create a small abstraction for such use cases.
It helps keep the label values inside `metrics.rs`, right next
to the place where the metric and its labels are declared.
2023-06-23 16:42:12 +02:00
Alexander Bayandin
c07b6ffbdc Fix git tag name for release (#4545)
## Problem

A git tag for a release has an extra `release-` prefix (it looks like
`release-release-3439`).
 
## Summary of changes
- Do not add `release-` prefix when create git tag
2023-06-23 12:52:17 +01:00
Alexander Bayandin
6c3605fc24 Nightly Benchmarks: Increase timeout for pgbench-compare job (#4551)
## Problem

In the test environment vacuum duration fluctuates from ~1h to ~5h, along
with another two 1h benchmarks (`select-only` and `simple-update`) it
could be up to 7h which is longer than 6h timeout.

## Summary of changes
- Increase timeout for pgbench-compare job to 8h
- Remove 6h timeouts from Nightly Benchmarks (this is a default value)
2023-06-23 12:47:37 +01:00
Vadim Kharitonov
d96d51a3b7 Update rust to 1.70.0 (#4550) 2023-06-23 13:09:04 +02:00
Alex Chi Z
a010b2108a pgserver: better template config file (#4554)
* `compaction_threshold` should be an integer, not a string.
* uncomment `[section]` so that if a user needs to modify the config,
they can simply uncomment the corresponding line. Otherwise it's easy
for us to forget uncommenting the `[section]` when uncommenting the
config item we want to configure.

Signed-off-by: Alex Chi <iskyzh@gmail.com>
2023-06-23 10:18:06 +03:00
Anastasia Lubennikova
2f618f46be Use BUILD_TAG in compute_ctl binary. (#4541)
Pass BUILD_TAG to compute_ctl binary. 
We need it to access versioned extension storage.
2023-06-22 17:06:16 +03:00
Alexander Bayandin
d3aa8a48ea Update client libs for test_runner/pg_clients to their latest versions (#4547)
Resolves https://github.com/neondatabase/neon/security/dependabot/27
2023-06-21 16:20:35 +01:00
Christian Schwarz
e4da76f021 update_gc_info: fix typo in timeline_id tracing field (#4546)
Commit

```
commit 472cc17b7a
Author: Dmitry Rodionov <dmitry@neon.tech>
Date:   Thu Jun 15 17:30:12 2023 +0300

    propagate lock guard to background deletion task (#4495)
```

did a drive-by fix, but, the drive-by had a typo.

```
gc_loop{tenant_id=2e2f2bff091b258ac22a4c4dd39bd25d}:update_gc_info{timline_id=837c688fd37c903639b9aa0a6dd3f1f1}:download_remote_layer{layer=000000000000000000000000000000000000-FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF__00000000024DA0D1-000000000443FB51}:panic{thread=background op worker location=pageserver/src/tenant/timeline.rs:4843:25}: missing extractors: ["TimelineId"]

Stack backtrace:
   0: utils::logging::tracing_panic_hook
             at /libs/utils/src/logging.rs:166:21
   1: <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/alloc/src/boxed.rs:2002:9
   2: std::panicking::rust_panic_with_hook
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/std/src/panicking.rs:692:13
   3: std::panicking::begin_panic_handler::{{closure}}
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/std/src/panicking.rs:579:13
   4: std::sys_common::backtrace::__rust_end_short_backtrace
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/std/src/sys_common/backtrace.rs:137:18
   5: rust_begin_unwind
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/std/src/panicking.rs:575:5
   6: core::panicking::panic_fmt
             at /rustc/9eb3afe9ebe9c7d2b84b71002d44f4a0edac95e0/library/core/src/panicking.rs:64:14
   7: pageserver::tenant::timeline::debug_assert_current_span_has_tenant_and_timeline_id
             at /pageserver/src/tenant/timeline.rs:4843:25
   8: <pageserver::tenant::timeline::Timeline>::download_remote_layer::{closure#0}::{closure#0}
             at /pageserver/src/tenant/timeline.rs:4368:9
   9: <tracing::instrument::Instrumented<<pageserver::tenant::timeline::Timeline>::download_remote_layer::{closure#0}::{closure#0}> as core::future::future::Future>::poll
             at /.cargo/registry/src/github.com-1ecc6299db9ec823/tracing-0.1.37/src/instrument.rs:272:9
  10: <pageserver::tenant::timeline::Timeline>::download_remote_layer::{closure#0}
             at /pageserver/src/tenant/timeline.rs:4363:5
  11: <pageserver::tenant::timeline::Timeline>::get_reconstruct_data::{closure#0}
             at /pageserver/src/tenant/timeline.rs:2618:69
  12: <pageserver::tenant::timeline::Timeline>::get::{closure#0}
             at /pageserver/src/tenant/timeline.rs:565:13
  13: <pageserver::tenant::timeline::Timeline>::list_slru_segments::{closure#0}
             at /pageserver/src/pgdatadir_mapping.rs:427:42
  14: <pageserver::tenant::timeline::Timeline>::is_latest_commit_timestamp_ge_than::{closure#0}
             at /pageserver/src/pgdatadir_mapping.rs:390:13
  15: <pageserver::tenant::timeline::Timeline>::find_lsn_for_timestamp::{closure#0}
             at /pageserver/src/pgdatadir_mapping.rs:338:17
  16: <pageserver::tenant::timeline::Timeline>::update_gc_info::{closure#0}::{closure#0}
             at /pageserver/src/tenant/timeline.rs:3967:71
  17: <tracing::instrument::Instrumented<<pageserver::tenant::timeline::Timeline>::update_gc_info::{closure#0}::{closure#0}> as core::future::future::Future>::poll
             at /.cargo/registry/src/github.com-1ecc6299db9ec823/tracing-0.1.37/src/instrument.rs:272:9
  18: <pageserver::tenant::timeline::Timeline>::update_gc_info::{closure#0}
             at /pageserver/src/tenant/timeline.rs:3948:5
  19: <pageserver::tenant::Tenant>::refresh_gc_info_internal::{closure#0}
             at /pageserver/src/tenant.rs:2687:21
  20: <pageserver::tenant::Tenant>::gc_iteration_internal::{closure#0}
             at /pageserver/src/tenant.rs:2551:13
  21: <pageserver::tenant::Tenant>::gc_iteration::{closure#0}
             at /pageserver/src/tenant.rs:1490:13
  22: pageserver::tenant::tasks::gc_loop::{closure#0}::{closure#0}
             at /pageserver/src/tenant/tasks.rs:187:21
  23: pageserver::tenant::tasks::gc_loop::{closure#0}
             at /pageserver/src/tenant/tasks.rs:208:5
```

## Problem

## Summary of changes

## Checklist before requesting a review

- [ ] I have performed a self-review of my code.
- [ ] If it is a core feature, I have added thorough tests.
- [ ] Do we need to implement analytics? if so did you add the relevant
metrics to the dashboard?
- [ ] If this PR requires public announcement, mark it with
/release-notes label and add several sentences in this section.

## Checklist before merging

- [ ] Do not forget to reformat commit message to not include the above
checklist
2023-06-21 18:00:14 +03:00
Christian Schwarz
870740c949 cargo update -p openssl (#4542)
To unblock release
https://github.com/neondatabase/neon/pull/4536#issuecomment-1600678054

Context: https://rustsec.org/advisories/RUSTSEC-2023-0044
2023-06-21 15:50:52 +03:00
Dmitry Rodionov
75d583c04a Tenant::load: fix uninit timeline marker processing (#4458)
## Problem

During timeline creation we create special mark file which presense
indicates that initialization didnt complete successfully. In case of a
crash restart we can remove such half-initialized timeline and following
retry from control plane side should perform another attempt.

So in case of a possible crash restart during initial loading we have
following picture:

```
timelines
| - <timeline_id>___uninit
| - <timeline_id>
| - | <timeline files>
```

We call `std::fs::read_dir` to walk files in `timelines` directory one
by one. If we see uninit file
we proceed with deletion of both, timeline directory and uninit file. If
we see timeline we check if uninit file exists and do the same cleanup.
But in fact its possible to get both branches to be true at the same
time. Result of readdir doesnt reflect following directory state
modifications. So you can still get "valid" entry on the next iteration
of the loop despite the fact that it was deleted in one of the previous
iterations of the loop.

To see that you can apply the following patch (it disables uninit mark
cleanup on successful timeline creation):
```diff
diff --git a/pageserver/src/tenant.rs b/pageserver/src/tenant.rs
index 4beb2664..b3cdad8f 100644
--- a/pageserver/src/tenant.rs
+++ b/pageserver/src/tenant.rs
@@ -224,11 +224,6 @@ impl UninitializedTimeline<'_> {
                             )
                         })?;
                 }
-                uninit_mark.remove_uninit_mark().with_context(|| {
-                    format!(
-                        "Failed to remove uninit mark file for timeline {tenant_id}/{timeline_id}"
-                    )
-                })?;
                 v.insert(Arc::clone(&new_timeline));
 
                 new_timeline.maybe_spawn_flush_loop();
```
And perform the following steps:

```bash
neon_local init
neon_local start
neon_local tenant create
neon_local stop
neon_local start
```

The error is:
```log
INFO load{tenant_id=X}:blocking: Found an uninit mark file .neon/tenants/X/timelines/Y.___uninit, removing the timeline and its uninit mark
2023-06-09T18:43:41.664247Z ERROR load{tenant_id=X}: load failed, setting tenant state to Broken: failed to load metadata

Caused by:
    0: Failed to read metadata bytes from path .neon/tenants/X/timelines/Y/metadata
    1: No such file or directory (os error 2)
```

So uninit mark got deleted together with timeline directory but we still
got directory entry for it and tried to load it.

The bug prevented tenant from being successfully loaded.

## Summary of changes

Ideally I think we shouldnt place uninit marks in the same directory as timeline directories but move them to separate directory and
gather them as an input to actual listing, but that would be sort of an
on-disk format change, so just check whether entries are still valid
before operating on them.
2023-06-21 14:25:58 +03:00
Alek Westover
b4c5beff9f list_files function in remote_storage (#4522) 2023-06-20 15:36:28 -04:00
bojanserafimov
90e1f629e8 Add test for skip_pg_catalog_updates (#4530) 2023-06-20 11:38:59 -04:00
Alek Westover
2023e22ed3 Add RelationError error type to pageserver rather than string parsing error messages (#4508) 2023-06-19 13:14:20 -04:00